RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 ABCA3Q99758 1704 aa12.4□□□□□ -0.42
SPTAN1-206ENST00000475367 WDR17Q8IZU2 1322 aa12.4□□□□□ -0.42
SPTAN1-206ENST00000475367 PHKG2P15735 406 aa12.4□□□□□ -0.42
SPTAN1-206ENST00000475367 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
SPTAN1-206ENST00000475367 LTBP4Q8N2S1 1624 aa12.4□□□□□ -0.43
SPTAN1-206ENST00000475367 HDGFL1Q5TGJ6 251 aa12.39□□□□□ -0.43
SPTAN1-206ENST00000475367 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
SPTAN1-206ENST00000475367 COL5A2P05997 1499 aaPredicted RBP12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 F6X3S4 739 aa12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 FLIIQ13045 1269 aa12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 CYP27B1O15528 508 aa12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 HOXB7P09629 217 aa12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 PLEKHG2Q9H7P9 1386 aa12.38□□□□□ -0.43
SPTAN1-206ENST00000475367 ADAMTS7Q9UKP4 1686 aa12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 EVA1CP58658 441 aa12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 SMC5Q8IY18 1101 aa12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 LARP1Q6PKG0 1096 aaKnown RBP12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 SLC52A2Q9HAB3 445 aa12.37□□□□□ -0.43
SPTAN1-206ENST00000475367 CCT4P50991 539 aaKnown RBP12.36□□□□□ -0.43
SPTAN1-206ENST00000475367 SIRT2Q8IXJ6 389 aa12.36□□□□□ -0.43
SPTAN1-206ENST00000475367 SIPA1L3O60292 1781 aaPredicted RBP12.36□□□□□ -0.43
SPTAN1-206ENST00000475367 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 DCAF5Q96JK2 942 aa12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 CHMP4AQ9BY43 222 aa12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 PKD1L3Q7Z443 1732 aa12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 ZCRB1Q8TBF4 217 aaKnown RBP12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 MEIS3Q99687 375 aa12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 HEG1Q9ULI3 1381 aa12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 AHDC1Q5TGY3 1603 aaPredicted RBP12.35□□□□□ -0.43
SPTAN1-206ENST00000475367 CACNA1FO60840 1977 aa12.34□□□□□ -0.43
SPTAN1-206ENST00000475367 SCN11AQ9UI33 1791 aa12.34□□□□□ -0.43
SPTAN1-206ENST00000475367 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
SPTAN1-206ENST00000475367 SLC39A6Q13433 755 aa12.34□□□□□ -0.43
SPTAN1-206ENST00000475367 C8orf34Q49A92 452 aa12.34□□□□□ -0.43
SPTAN1-206ENST00000475367 IL2RBP14784 551 aa12.33□□□□□ -0.44
SPTAN1-206ENST00000475367 NUCB1Q02818 461 aa12.33□□□□□ -0.44
SPTAN1-206ENST00000475367 ZNF790Q6PG37 636 aa12.33□□□□□ -0.44
SPTAN1-206ENST00000475367 PRAMEF22A3QJZ6 481 aa12.33□□□□□ -0.44
SPTAN1-206ENST00000475367 BTG4Q9NY30 223 aa12.33□□□□□ -0.44
SPTAN1-206ENST00000475367 ANXA1P04083 346 aa12.32□□□□□ -0.44
SPTAN1-206ENST00000475367 CABP4P57796 275 aa12.32□□□□□ -0.44
SPTAN1-206ENST00000475367 ANKRD44Q8N8A2 993 aa12.32□□□□□ -0.44
SPTAN1-206ENST00000475367 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
SPTAN1-206ENST00000475367 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
SPTAN1-206ENST00000475367 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
SPTAN1-206ENST00000475367 PARP4Q9UKK3 1724 aaKnown RBP12.32□□□□□ -0.44
SPTAN1-206ENST00000475367 MRC1P22897 1456 aa12.31□□□□□ -0.44
SPTAN1-206ENST00000475367 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
SPTAN1-206ENST00000475367 NPM2Q86SE8 214 aaKnown RBP12.31□□□□□ -0.44
SPTAN1-206ENST00000475367 CHD1LQ86WJ1 897 aa12.31□□□□□ -0.44
SPTAN1-206ENST00000475367 RPAP2Q8IXW5 612 aaPredicted RBP12.31□□□□□ -0.44
SPTAN1-206ENST00000475367 DBF4Q9UBU7 674 aaPredicted RBP12.31□□□□□ -0.44
SPTAN1-206ENST00000475367 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
SPTAN1-206ENST00000475367 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
SPTAN1-206ENST00000475367 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
SPTAN1-206ENST00000475367 DDX54Q8TDD1 881 aaKnown RBP12.3□□□□□ -0.44
SPTAN1-206ENST00000475367 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
SPTAN1-206ENST00000475367 USP35Q9P2H5 1018 aa12.3□□□□□ -0.44
SPTAN1-206ENST00000475367 ZNF496Q96IT1 587 aaPredicted RBP12.3□□□□□ -0.44
SPTAN1-206ENST00000475367 COL22A1Q8NFW1 1626 aaPredicted RBP12.3□□□□□ -0.44
SPTAN1-206ENST00000475367 ANP32AP39687 249 aaKnown RBP12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 PIP4K2BP78356 416 aa12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 DCTPP1Q9H773 170 aa12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 COL14A1Q05707 1796 aaKnown RBP12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 GNAI2P04899 355 aa12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 GNAI3P08754 354 aa12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
SPTAN1-206ENST00000475367 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
SPTAN1-206ENST00000475367 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
SPTAN1-206ENST00000475367 TOM1O60784 492 aa12.28□□□□□ -0.44
SPTAN1-206ENST00000475367 DNAAF4Q8WXU2 420 aa12.28□□□□□ -0.44
SPTAN1-206ENST00000475367 HYPKQ9NX55 129 aa12.28□□□□□ -0.44
SPTAN1-206ENST00000475367 MSH5O43196 834 aa12.27□□□□□ -0.44
SPTAN1-206ENST00000475367 PHLPP1O60346 1717 aa12.27□□□□□ -0.44
SPTAN1-206ENST00000475367 ADCY9O60503 1353 aa12.27□□□□□ -0.44
SPTAN1-206ENST00000475367 PDIA6Q15084 440 aa12.27□□□□□ -0.44
SPTAN1-206ENST00000475367 FMNL2Q96PY5 1086 aa12.27□□□□□ -0.44
SPTAN1-206ENST00000475367 SRCIN1Q9C0H9 1055 aa12.27□□□□□ -0.44
SPTAN1-206ENST00000475367 USP44Q9H0E7 712 aa12.27□□□□□ -0.44
SPTAN1-206ENST00000475367 DDX21Q9NR30 783 aaKnown RBP eCLIP12.27□□□□□ -0.44
SPTAN1-206ENST00000475367 COL16A1Q07092 1604 aaPredicted RBP12.27□□□□□ -0.45
SPTAN1-206ENST00000475367 SNRPA1P09661 255 aaKnown RBP12.27□□□□□ -0.45
SPTAN1-206ENST00000475367 ADAMTS2O95450 1211 aa12.26□□□□□ -0.45
SPTAN1-206ENST00000475367 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms