RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 NLGN1Q8N2Q7 840 aa19.94■□□□□ 0.78
ATG9A-220ENST00000475339 DCAF5Q96JK2 942 aa19.94■□□□□ 0.78
ATG9A-220ENST00000475339 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
ATG9A-220ENST00000475339 CYP27B1O15528 508 aa19.93■□□□□ 0.78
ATG9A-220ENST00000475339 TMF1P82094 1093 aa19.93■□□□□ 0.78
ATG9A-220ENST00000475339 PIM2Q9P1W9 311 aa19.93■□□□□ 0.78
ATG9A-220ENST00000475339 BRCA1P38398 1863 aaKnown RBP19.92■□□□□ 0.78
ATG9A-220ENST00000475339 FOXN1O15353 648 aa19.92■□□□□ 0.78
ATG9A-220ENST00000475339 DALRD3Q5D0E6 543 aaKnown RBP19.92■□□□□ 0.78
ATG9A-220ENST00000475339 VEGFAP15692 232 aaPredicted RBP19.91■□□□□ 0.78
ATG9A-220ENST00000475339 ATP6V1AP38606 617 aa19.9■□□□□ 0.78
ATG9A-220ENST00000475339 TRAPPC3LQ5T215 181 aa19.9■□□□□ 0.78
ATG9A-220ENST00000475339 MKRN1Q9UHC7 482 aaKnown RBP19.9■□□□□ 0.78
ATG9A-220ENST00000475339 MAP2P11137 1827 aaKnown RBP19.9■□□□□ 0.78
ATG9A-220ENST00000475339 ARFGEF1Q9Y6D6 1849 aa19.9■□□□□ 0.78
ATG9A-220ENST00000475339 A0A1W2PP64 1363 aa19.89■□□□□ 0.77
ATG9A-220ENST00000475339 ITGB4P16144 1822 aa19.89■□□□□ 0.77
ATG9A-220ENST00000475339 PRDM10Q9NQV6 1147 aa19.89■□□□□ 0.77
ATG9A-220ENST00000475339 PARP3Q9Y6F1 533 aa19.89■□□□□ 0.77
ATG9A-220ENST00000475339 COG3Q96JB2 828 aa19.88■□□□□ 0.77
ATG9A-220ENST00000475339 TERF2IPQ9NYB0 399 aa19.88■□□□□ 0.77
ATG9A-220ENST00000475339 ASAP1Q9ULH1 1129 aa19.87■□□□□ 0.77
ATG9A-220ENST00000475339 RTCBQ9Y3I0 505 aaKnown RBP19.87■□□□□ 0.77
ATG9A-220ENST00000475339 ROCK2O75116 1388 aaKnown RBP19.86■□□□□ 0.77
ATG9A-220ENST00000475339 C4AP0C0L4 1744 aa19.86■□□□□ 0.77
ATG9A-220ENST00000475339 GYS1P13807 737 aa19.86■□□□□ 0.77
ATG9A-220ENST00000475339 RRS1Q15050 365 aaKnown RBP19.86■□□□□ 0.77
ATG9A-220ENST00000475339 ARHGEF1Q92888 912 aaKnown RBP19.86■□□□□ 0.77
ATG9A-220ENST00000475339 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
ATG9A-220ENST00000475339 SBF1O95248 1867 aa19.86■□□□□ 0.77
ATG9A-220ENST00000475339 GLTPD2A6NH11 291 aa19.85■□□□□ 0.77
ATG9A-220ENST00000475339 PCGF6Q9BYE7 350 aa19.85■□□□□ 0.77
ATG9A-220ENST00000475339 CHRNA5P30532 468 aa19.84■□□□□ 0.77
ATG9A-220ENST00000475339 RASSF7Q02833 373 aa19.84■□□□□ 0.77
ATG9A-220ENST00000475339 ZC3H4Q9UPT8 1303 aaKnown RBP19.83■□□□□ 0.77
ATG9A-220ENST00000475339 CREBZFQ9NS37 354 aa19.83■□□□□ 0.77
ATG9A-220ENST00000475339 TMOD3Q9NYL9 352 aa19.83■□□□□ 0.77
ATG9A-220ENST00000475339 RTL1A6NKG5 1358 aa19.83■□□□□ 0.76
ATG9A-220ENST00000475339 RFC4P35249 363 aa19.82■□□□□ 0.76
ATG9A-220ENST00000475339 CTCFP49711 727 aaPredicted RBP19.82■□□□□ 0.76
ATG9A-220ENST00000475339 ABHD8Q96I13 439 aa19.82■□□□□ 0.76
ATG9A-220ENST00000475339 SMG6Q86US8 1419 aaKnown RBP19.82■□□□□ 0.76
ATG9A-220ENST00000475339 NEUROD1Q13562 356 aa19.81■□□□□ 0.76
ATG9A-220ENST00000475339 NKX1-1Q15270 411 aaPredicted RBP19.81■□□□□ 0.76
ATG9A-220ENST00000475339 POTECB2RU33 542 aa19.8■□□□□ 0.76
ATG9A-220ENST00000475339 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
ATG9A-220ENST00000475339 AIDAQ96BJ3 306 aa19.8■□□□□ 0.76
ATG9A-220ENST00000475339 ATG3Q9NT62 314 aa19.8■□□□□ 0.76
ATG9A-220ENST00000475339 KDM6AO15550 1401 aaPredicted RBP19.79■□□□□ 0.76
ATG9A-220ENST00000475339 ADRA2BP18089 450 aa19.79■□□□□ 0.76
ATG9A-220ENST00000475339 LMNB1P20700 586 aa19.79■□□□□ 0.76
ATG9A-220ENST00000475339 LBX1P52954 281 aa19.79■□□□□ 0.76
ATG9A-220ENST00000475339 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
ATG9A-220ENST00000475339 MLLT1Q03111 559 aaPredicted RBP19.78■□□□□ 0.76
ATG9A-220ENST00000475339 DDR1Q08345 913 aa19.77■□□□□ 0.76
ATG9A-220ENST00000475339 SLC4A9Q96Q91 983 aa19.77■□□□□ 0.76
ATG9A-220ENST00000475339 CNTNAP1P78357 1384 aa19.76■□□□□ 0.75
ATG9A-220ENST00000475339 RPS6KA4O75676 772 aa19.75■□□□□ 0.75
ATG9A-220ENST00000475339 RC3H1Q5TC82 1133 aaKnown RBP19.75■□□□□ 0.75
ATG9A-220ENST00000475339 INSRP06213 1382 aa19.74■□□□□ 0.75
ATG9A-220ENST00000475339 KDRP35968 1356 aa19.74■□□□□ 0.75
ATG9A-220ENST00000475339 FKBP8Q14318 412 aa19.74■□□□□ 0.75
ATG9A-220ENST00000475339 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
ATG9A-220ENST00000475339 SPG7Q9UQ90 795 aa19.74■□□□□ 0.75
ATG9A-220ENST00000475339 CHADLQ6NUI6 762 aa19.73■□□□□ 0.75
ATG9A-220ENST00000475339 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
ATG9A-220ENST00000475339 WBP1LQ9NX94 342 aa19.73■□□□□ 0.75
ATG9A-220ENST00000475339 CNTNAP4Q9C0A0 1308 aa19.73■□□□□ 0.75
ATG9A-220ENST00000475339 POTEIP0CG38 1075 aa19.72■□□□□ 0.75
ATG9A-220ENST00000475339 POTEJP0CG39 1038 aa19.72■□□□□ 0.75
ATG9A-220ENST00000475339 VEGFBP49765 207 aa19.72■□□□□ 0.75
ATG9A-220ENST00000475339 CCDC85CA6NKD9 419 aa19.71■□□□□ 0.75
ATG9A-220ENST00000475339 DPY19L2Q6NUT2 758 aa19.71■□□□□ 0.75
ATG9A-220ENST00000475339 GGNBP2Q9H3C7 697 aa19.71■□□□□ 0.75
ATG9A-220ENST00000475339 RGS19P49795 217 aa19.7■□□□□ 0.74
ATG9A-220ENST00000475339 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
ATG9A-220ENST00000475339 HSPA8P11142 646 aaKnown RBP19.69■□□□□ 0.74
ATG9A-220ENST00000475339 FLT4P35916 1363 aa19.69■□□□□ 0.74
ATG9A-220ENST00000475339 POLRMTO00411 1230 aaKnown RBP19.68■□□□□ 0.74
ATG9A-220ENST00000475339 FYB1O15117 783 aa19.68■□□□□ 0.74
ATG9A-220ENST00000475339 PHKG2P15735 406 aa19.68■□□□□ 0.74
ATG9A-220ENST00000475339 PUS7Q96PZ0 661 aaKnown RBP19.68■□□□□ 0.74
ATG9A-220ENST00000475339 NFKBIEO00221 500 aa19.67■□□□□ 0.74
ATG9A-220ENST00000475339 IFNL2Q8IZJ0 200 aa19.67■□□□□ 0.74
ATG9A-220ENST00000475339 USP42Q9H9J4 1324 aaKnown RBP19.67■□□□□ 0.74
ATG9A-220ENST00000475339 TIAM2Q8IVF5 1701 aa19.66■□□□□ 0.74
ATG9A-220ENST00000475339 CARD11Q9BXL7 1154 aa19.66■□□□□ 0.74
ATG9A-220ENST00000475339 MYH14Q7Z406 1995 aaKnown RBP19.66■□□□□ 0.74
ATG9A-220ENST00000475339 TM4SF1P30408 202 aa19.65■□□□□ 0.74
ATG9A-220ENST00000475339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.65■□□□□ 0.74
ATG9A-220ENST00000475339 PASKQ96RG2 1323 aa19.65■□□□□ 0.74
ATG9A-220ENST00000475339 CCDC88AQ3V6T2 1871 aa19.65■□□□□ 0.74
ATG9A-220ENST00000475339 TTLL6Q8N841 843 aa19.64■□□□□ 0.73
ATG9A-220ENST00000475339 COL5A3P25940 1745 aaPredicted RBP19.64■□□□□ 0.73
ATG9A-220ENST00000475339 NCAPD2Q15021 1401 aa19.62■□□□□ 0.73
ATG9A-220ENST00000475339 TMEM88BA6NKF7 163 aa19.62■□□□□ 0.73
ATG9A-220ENST00000475339 CRKLP46109 303 aaKnown RBP19.62■□□□□ 0.73
ATG9A-220ENST00000475339 ERFEQ4G0M1 354 aa19.62■□□□□ 0.73
ATG9A-220ENST00000475339 KIF24Q5T7B8 1368 aa19.61■□□□□ 0.73
ATG9A-220ENST00000475339 EMILIN1Q9Y6C2 1016 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms