RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 CDCA8Q53HL2 280 aa22.15■■□□□ 1.14
ITGB1-211ENST00000475184 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.15■■□□□ 1.149e-14■■□□□ 11.7
ITGB1-211ENST00000475184 COL5A3P25940 1745 aaPredicted RBP22.14■■□□□ 1.14
ITGB1-211ENST00000475184 CARD14Q9BXL6 1004 aa22.14■■□□□ 1.13
ITGB1-211ENST00000475184 APLP1P51693 650 aa22.13■■□□□ 1.13
ITGB1-211ENST00000475184 C10orf71Q711Q0 1435 aa22.13■■□□□ 1.13
ITGB1-211ENST00000475184 ARFGEF1Q9Y6D6 1849 aa22.13■■□□□ 1.13
ITGB1-211ENST00000475184 WASHC2AQ641Q2 1341 aa22.12■■□□□ 1.13
ITGB1-211ENST00000475184 C4AP0C0L4 1744 aa22.12■■□□□ 1.13
ITGB1-211ENST00000475184 PHKG2P15735 406 aa22.12■■□□□ 1.13
ITGB1-211ENST00000475184 IFNL2Q8IZJ0 200 aa22.12■■□□□ 1.13
ITGB1-211ENST00000475184 EYA1Q99502 592 aa22.12■■□□□ 1.13
ITGB1-211ENST00000475184 ATG3Q9NT62 314 aa22.12■■□□□ 1.13
ITGB1-211ENST00000475184 KDRP35968 1356 aa22.12■■□□□ 1.13
ITGB1-211ENST00000475184 MYH14Q7Z406 1995 aaKnown RBP22.11■■□□□ 1.13
ITGB1-211ENST00000475184 TGFB2P61812 414 aa22.11■■□□□ 1.13
ITGB1-211ENST00000475184 BCS1LQ9Y276 419 aa22.11■■□□□ 1.13
ITGB1-211ENST00000475184 TOMM70O94826 608 aa22.1■■□□□ 1.13
ITGB1-211ENST00000475184 WDR90Q96KV7 1748 aa22.1■■□□□ 1.13
ITGB1-211ENST00000475184 A0A0G2JLW4 131 aa22.09■■□□□ 1.13
ITGB1-211ENST00000475184 NLGN1Q8N2Q7 840 aa22.09■■□□□ 1.13
ITGB1-211ENST00000475184 RTCBQ9Y3I0 505 aaKnown RBP22.09■■□□□ 1.13
ITGB1-211ENST00000475184 TRAPPC3LQ5T215 181 aa22.08■■□□□ 1.13
ITGB1-211ENST00000475184 ARHGAP27Q6ZUM4 889 aa22.07■■□□□ 1.12
ITGB1-211ENST00000475184 ADRA2BP18089 450 aa22.06■■□□□ 1.12
ITGB1-211ENST00000475184 DNAJC5GQ8N7S2 189 aa22.06■■□□□ 1.12
ITGB1-211ENST00000475184 PLEKHG2Q9H7P9 1386 aa22.06■■□□□ 1.12
ITGB1-211ENST00000475184 SLC4A9Q96Q91 983 aa22.05■■□□□ 1.12
ITGB1-211ENST00000475184 NMRK2Q9NPI5 230 aa22.05■■□□□ 1.12
ITGB1-211ENST00000475184 CCDC87Q9NVE4 849 aa22.05■■□□□ 1.12
ITGB1-211ENST00000475184 PCNTO95613 3336 aa22.05■■□□□ 1.12
ITGB1-211ENST00000475184 FCHSD2O94868 740 aa22.04■■□□□ 1.12
ITGB1-211ENST00000475184 DPEP1P16444 411 aa22.04■■□□□ 1.12
ITGB1-211ENST00000475184 ARHGEF1Q92888 912 aaKnown RBP22.04■■□□□ 1.12
ITGB1-211ENST00000475184 POLKQ9UBT6 870 aa22.04■■□□□ 1.12
ITGB1-211ENST00000475184 GYS1P13807 737 aa22.03■■□□□ 1.12
ITGB1-211ENST00000475184 RC3H1Q5TC82 1133 aaKnown RBP22.03■■□□□ 1.12
ITGB1-211ENST00000475184 RBM42Q9BTD8 480 aaKnown RBP22.03■■□□□ 1.12
ITGB1-211ENST00000475184 CNTNAP4Q9C0A0 1308 aa22.03■■□□□ 1.12
ITGB1-211ENST00000475184 SBF1O95248 1867 aa22.03■■□□□ 1.12
ITGB1-211ENST00000475184 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
ITGB1-211ENST00000475184 RFC4P35249 363 aa22.02■■□□□ 1.12
ITGB1-211ENST00000475184 EIF4A2Q14240 407 aaKnown RBP22.02■■□□□ 1.12
ITGB1-211ENST00000475184 PARP3Q9Y6F1 533 aa22.01■■□□□ 1.11
ITGB1-211ENST00000475184 RPS6KA4O75676 772 aa22■■□□□ 1.11
ITGB1-211ENST00000475184 RBM46Q8TBY0 533 aaKnown RBP22■■□□□ 1.11
ITGB1-211ENST00000475184 TNRC6CQ9HCJ0 1690 aaKnown RBP21.99■■□□□ 1.11
ITGB1-211ENST00000475184 HSP90AB1P08238 724 aaKnown RBP21.99■■□□□ 1.11
ITGB1-211ENST00000475184 C9orf131Q5VYM1 1079 aa21.99■■□□□ 1.11
ITGB1-211ENST00000475184 DCAF5Q96JK2 942 aa21.99■■□□□ 1.11
ITGB1-211ENST00000475184 KDM6AO15550 1401 aaPredicted RBP21.98■■□□□ 1.11
ITGB1-211ENST00000475184 KCNA3P22001 575 aa21.98■■□□□ 1.11
ITGB1-211ENST00000475184 C16orf71Q8IYS4 520 aaPredicted RBP21.97■■□□□ 1.11
ITGB1-211ENST00000475184 TJP1Q07157 1748 aa21.97■■□□□ 1.11
ITGB1-211ENST00000475184 TNNT2P45379 298 aaPredicted RBP21.96■■□□□ 1.11
ITGB1-211ENST00000475184 PIM2Q9P1W9 311 aa21.96■■□□□ 1.11
ITGB1-211ENST00000475184 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
ITGB1-211ENST00000475184 CABP4P57796 275 aa21.95■■□□□ 1.1
ITGB1-211ENST00000475184 PLEKHO1Q53GL0 409 aaPredicted RBP21.94■■□□□ 1.1
ITGB1-211ENST00000475184 ZNF530Q6P9A1 599 aaPredicted RBP21.94■■□□□ 1.1
ITGB1-211ENST00000475184 SCN11AQ9UI33 1791 aa21.94■■□□□ 1.1
ITGB1-211ENST00000475184 FSTL1Q12841 308 aa21.93■■□□□ 1.1
ITGB1-211ENST00000475184 DALRD3Q5D0E6 543 aaKnown RBP21.93■■□□□ 1.1
ITGB1-211ENST00000475184 KDM2BQ8NHM5 1336 aa21.93■■□□□ 1.1
ITGB1-211ENST00000475184 KLRG1Q96E93 195 aa21.93■■□□□ 1.1
ITGB1-211ENST00000475184 ADAMTS7Q9UKP4 1686 aa21.93■■□□□ 1.1
ITGB1-211ENST00000475184 USP42Q9H9J4 1324 aaKnown RBP21.92■■□□□ 1.1
ITGB1-211ENST00000475184 PTCD1O75127 700 aaKnown RBP21.92■■□□□ 1.1
ITGB1-211ENST00000475184 CRKLP46109 303 aaKnown RBP21.92■■□□□ 1.1
ITGB1-211ENST00000475184 HTRA3P83110 453 aa21.92■■□□□ 1.1
ITGB1-211ENST00000475184 SRP68Q9UHB9 627 aaKnown RBP21.92■■□□□ 1.1
ITGB1-211ENST00000475184 AFDNP55196 1824 aaKnown RBP21.92■■□□□ 1.1
ITGB1-211ENST00000475184 DDR1Q08345 913 aa21.91■■□□□ 1.1
ITGB1-211ENST00000475184 FKBP8Q14318 412 aa21.91■■□□□ 1.1
ITGB1-211ENST00000475184 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
ITGB1-211ENST00000475184 RNF181Q9P0P0 153 aa21.91■■□□□ 1.1
ITGB1-211ENST00000475184 VIRMAQ69YN4 1812 aaKnown RBP21.91■■□□□ 1.1
ITGB1-211ENST00000475184 CCDC88AQ3V6T2 1871 aa21.9■■□□□ 1.1
ITGB1-211ENST00000475184 MTHFSP49914 203 aa21.89■■□□□ 1.09
ITGB1-211ENST00000475184 JMYQ8N9B5 988 aa21.89■■□□□ 1.09
ITGB1-211ENST00000475184 CHRNA5P30532 468 aa21.88■■□□□ 1.09
ITGB1-211ENST00000475184 C1orf141Q5JVX7 400 aa21.88■■□□□ 1.09
ITGB1-211ENST00000475184 DLEC1Q9Y238 1755 aa21.88■■□□□ 1.09
ITGB1-211ENST00000475184 NFATC2IPQ8NCF5 419 aa21.87■■□□□ 1.09
ITGB1-211ENST00000475184 POLR3GLQ9BT43 218 aa21.87■■□□□ 1.09
ITGB1-211ENST00000475184 RRAGCQ9HB90 399 aa21.87■■□□□ 1.09
ITGB1-211ENST00000475184 COL13A1Q5TAT6 717 aaPredicted RBP21.86■■□□□ 1.09
ITGB1-211ENST00000475184 POLRMTO00411 1230 aaKnown RBP21.85■■□□□ 1.09
ITGB1-211ENST00000475184 AEBP1Q8IUX7 1158 aa21.85■■□□□ 1.09
ITGB1-211ENST00000475184 TIAM2Q8IVF5 1701 aa21.85■■□□□ 1.09
ITGB1-211ENST00000475184 NRXN2Q9P2S2 1712 aa21.84■■□□□ 1.09
ITGB1-211ENST00000475184 TM4SF1P30408 202 aa21.83■■□□□ 1.09
ITGB1-211ENST00000475184 INTS5Q6P9B9 1019 aaKnown RBP21.83■■□□□ 1.09
ITGB1-211ENST00000475184 SMC1BQ8NDV3 1235 aa21.83■■□□□ 1.09
ITGB1-211ENST00000475184 ZC3H4Q9UPT8 1303 aaKnown RBP21.82■■□□□ 1.08
ITGB1-211ENST00000475184 ZPR1O75312 459 aa21.82■■□□□ 1.08
ITGB1-211ENST00000475184 RASSF7Q02833 373 aa21.8■■□□□ 1.08
ITGB1-211ENST00000475184 USPL1Q5W0Q7 1092 aa21.8■■□□□ 1.08
ITGB1-211ENST00000475184 SOS1Q07889 1333 aaPredicted RBP21.8■■□□□ 1.08
ITGB1-211ENST00000475184 SULT6B1Q6IMI4 303 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms