RNA–Protein interactions for RNA: ENST00000475035.5

SNRPE-205, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 1 (best)

Gene SNRPE, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-205ENST00000475035 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
SNRPE-205ENST00000475035 PIGBQ92521 554 aa11.73□□□□□ -0.53
SNRPE-205ENST00000475035 NPC1L1Q9UHC9 1359 aa11.73□□□□□ -0.53
SNRPE-205ENST00000475035 KDRP35968 1356 aa11.72□□□□□ -0.53
SNRPE-205ENST00000475035 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
SNRPE-205ENST00000475035 POLD1P28340 1107 aa11.72□□□□□ -0.53
SNRPE-205ENST00000475035 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
SNRPE-205ENST00000475035 AEBP1Q8IUX7 1158 aa11.72□□□□□ -0.53
SNRPE-205ENST00000475035 COL24A1Q17RW2 1714 aa11.72□□□□□ -0.53
SNRPE-205ENST00000475035 IL13P35225 146 aa11.71□□□□□ -0.53
SNRPE-205ENST00000475035 MTHFSP49914 203 aa11.71□□□□□ -0.53
SNRPE-205ENST00000475035 SULT6B1Q6IMI4 303 aa11.71□□□□□ -0.53
SNRPE-205ENST00000475035 DCAF5Q96JK2 942 aa11.71□□□□□ -0.53
SNRPE-205ENST00000475035 AK7Q96M32 723 aa11.71□□□□□ -0.53
SNRPE-205ENST00000475035 ARXQ96QS3 562 aa11.71□□□□□ -0.53
SNRPE-205ENST00000475035 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
SNRPE-205ENST00000475035 UBR3Q6ZT12 1888 aa11.71□□□□□ -0.53
SNRPE-205ENST00000475035 ERVV-2B6SEH9 535 aa11.7□□□□□ -0.54
SNRPE-205ENST00000475035 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
SNRPE-205ENST00000475035 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
SNRPE-205ENST00000475035 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
SNRPE-205ENST00000475035 VIRMAQ69YN4 1812 aaKnown RBP11.7□□□□□ -0.54
SNRPE-205ENST00000475035 SCN11AQ9UI33 1791 aa11.69□□□□□ -0.54
SNRPE-205ENST00000475035 LOC102724428A0A0B4J2F2 783 aa11.69□□□□□ -0.54
SNRPE-205ENST00000475035 DIAPH1O60610 1272 aaKnown RBP11.69□□□□□ -0.54
SNRPE-205ENST00000475035 SIK1P57059 783 aa11.69□□□□□ -0.54
SNRPE-205ENST00000475035 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
SNRPE-205ENST00000475035 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
SNRPE-205ENST00000475035 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
SNRPE-205ENST00000475035 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
SNRPE-205ENST00000475035 ASAP1Q9ULH1 1129 aa11.68□□□□□ -0.54
SNRPE-205ENST00000475035 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
SNRPE-205ENST00000475035 CABP4P57796 275 aa11.67□□□□□ -0.54
SNRPE-205ENST00000475035 COL23A1Q86Y22 540 aaPredicted RBP11.67□□□□□ -0.54
SNRPE-205ENST00000475035 KLHL34Q8N239 644 aa11.67□□□□□ -0.54
SNRPE-205ENST00000475035 SYT17Q9BSW7 474 aa11.67□□□□□ -0.54
SNRPE-205ENST00000475035 COL3A1P02461 1466 aaPredicted RBP11.67□□□□□ -0.54
SNRPE-205ENST00000475035 COL5A3P25940 1745 aaPredicted RBP11.66□□□□□ -0.54
SNRPE-205ENST00000475035 PHF14O94880 888 aa11.66□□□□□ -0.54
SNRPE-205ENST00000475035 HMOX1P09601 288 aa11.66□□□□□ -0.54
SNRPE-205ENST00000475035 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
SNRPE-205ENST00000475035 ATG3Q9NT62 314 aa11.66□□□□□ -0.54
SNRPE-205ENST00000475035 SSFA2P28290 1259 aa11.65□□□□□ -0.54
SNRPE-205ENST00000475035 AKAP4Q5JQC9 854 aa11.65□□□□□ -0.54
SNRPE-205ENST00000475035 MSL1Q68DK7 614 aa11.65□□□□□ -0.54
SNRPE-205ENST00000475035 CFAP53Q96M91 514 aa11.65□□□□□ -0.54
SNRPE-205ENST00000475035 RBM42Q9BTD8 480 aaKnown RBP11.65□□□□□ -0.54
SNRPE-205ENST00000475035 CHD4Q14839 1912 aa11.64□□□□□ -0.55
SNRPE-205ENST00000475035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.64□□□□□ -0.55
SNRPE-205ENST00000475035 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
SNRPE-205ENST00000475035 GNPATO15228 680 aa11.64□□□□□ -0.55
SNRPE-205ENST00000475035 ITPK1Q13572 414 aa11.64□□□□□ -0.55
SNRPE-205ENST00000475035 MRC1P22897 1456 aa11.63□□□□□ -0.55
SNRPE-205ENST00000475035 YY1P25490 414 aa11.63□□□□□ -0.55
SNRPE-205ENST00000475035 CICQ96RK0 1608 aaPredicted RBP11.62□□□□□ -0.55
SNRPE-205ENST00000475035 NFATC2IPQ8NCF5 419 aa11.62□□□□□ -0.55
SNRPE-205ENST00000475035 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
SNRPE-205ENST00000475035 ADAMTS7Q9UKP4 1686 aa11.62□□□□□ -0.55
SNRPE-205ENST00000475035 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
SNRPE-205ENST00000475035 TJP1Q07157 1748 aa11.61□□□□□ -0.55
SNRPE-205ENST00000475035 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
SNRPE-205ENST00000475035 AMIGO3Q86WK7 504 aa11.61□□□□□ -0.55
SNRPE-205ENST00000475035 NUDCQ9Y266 331 aa11.61□□□□□ -0.55
SNRPE-205ENST00000475035 RTCBQ9Y3I0 505 aaKnown RBP11.61□□□□□ -0.55
SNRPE-205ENST00000475035 CNTNAP4Q9C0A0 1308 aa11.6□□□□□ -0.55
SNRPE-205ENST00000475035 RNMTO43148 476 aaKnown RBP11.6□□□□□ -0.55
SNRPE-205ENST00000475035 GPR162Q16538 588 aa11.6□□□□□ -0.55
SNRPE-205ENST00000475035 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
SNRPE-205ENST00000475035 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
SNRPE-205ENST00000475035 GAS2L2Q8NHY3 880 aa11.6□□□□□ -0.55
SNRPE-205ENST00000475035 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
SNRPE-205ENST00000475035 C4AP0C0L4 1744 aa11.6□□□□□ -0.55
SNRPE-205ENST00000475035 PPP2R1AP30153 589 aa11.59□□□□□ -0.55
SNRPE-205ENST00000475035 RC3H1Q5TC82 1133 aaKnown RBP11.59□□□□□ -0.55
SNRPE-205ENST00000475035 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
SNRPE-205ENST00000475035 SMIM5Q71RC9 77 aa11.58□□□□□ -0.56
SNRPE-205ENST00000475035 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
SNRPE-205ENST00000475035 LGR6Q9HBX8 967 aa11.58□□□□□ -0.56
SNRPE-205ENST00000475035 CD2APQ9Y5K6 639 aa11.58□□□□□ -0.56
SNRPE-205ENST00000475035 UBR2Q8IWV8 1755 aa11.58□□□□□ -0.56
SNRPE-205ENST00000475035 SIPA1L3O60292 1781 aaPredicted RBP11.57□□□□□ -0.56
SNRPE-205ENST00000475035 GNAT3A8MTJ3 354 aa11.57□□□□□ -0.56
SNRPE-205ENST00000475035 RPS6KA4O75676 772 aa11.57□□□□□ -0.56
SNRPE-205ENST00000475035 U2AF1L5P0DN76 240 aaPredicted RBP11.57□□□□□ -0.56
SNRPE-205ENST00000475035 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
SNRPE-205ENST00000475035 RFC4P35249 363 aa11.57□□□□□ -0.56
SNRPE-205ENST00000475035 CRKLP46109 303 aaKnown RBP11.57□□□□□ -0.56
SNRPE-205ENST00000475035 U2AF1Q01081 240 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNRPE-205ENST00000475035 KCPQ6ZWJ8 1503 aa11.56□□□□□ -0.56
SNRPE-205ENST00000475035 TEFQ10587 303 aa11.56□□□□□ -0.56
SNRPE-205ENST00000475035 TTC5Q8N0Z6 440 aa11.56□□□□□ -0.56
SNRPE-205ENST00000475035 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
SNRPE-205ENST00000475035 MMP10P09238 476 aa11.55□□□□□ -0.56
SNRPE-205ENST00000475035 SLC39A6Q13433 755 aa11.55□□□□□ -0.56
SNRPE-205ENST00000475035 NLGN1Q8N2Q7 840 aa11.55□□□□□ -0.56
SNRPE-205ENST00000475035 ARHGEF1Q92888 912 aaKnown RBP11.55□□□□□ -0.56
SNRPE-205ENST00000475035 KIF13BQ9NQT8 1826 aa11.54□□□□□ -0.56
SNRPE-205ENST00000475035 CCDC87Q9NVE4 849 aa11.54□□□□□ -0.56
SNRPE-205ENST00000475035 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
SNRPE-205ENST00000475035 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms