RNA–Protein interactions for RNA: ENST00000474466.5

HM13-215, Transcript of histocompatibility minor 13, human

TSL 3

Gene HM13, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-215	ENST00000474466	MAPK8IP3	Q9UPT6	1336 aa		13.65	□□□□□ -0.22
HM13-215	ENST00000474466	COL5A3	P25940	1745 aa	Predicted RBP	13.65	□□□□□ -0.22
HM13-215	ENST00000474466	CCDC184	Q52MB2	194 aa		13.65	□□□□□ -0.22
HM13-215	ENST00000474466	SLC27A3	Q5K4L6	730 aa		13.65	□□□□□ -0.22
HM13-215	ENST00000474466	LGR6	Q9HBX8	967 aa		13.65	□□□□□ -0.22
HM13-215	ENST00000474466	CEMIP	Q8WUJ3	1361 aa		13.64	□□□□□ -0.23
HM13-215	ENST00000474466	NFATC2IP	Q8NCF5	419 aa		13.64	□□□□□ -0.23
HM13-215	ENST00000474466	SLC52A2	Q9HAB3	445 aa		13.64	□□□□□ -0.23
HM13-215	ENST00000474466	ADAMTS8	Q9UP79	889 aa		13.64	□□□□□ -0.23
HM13-215	ENST00000474466	TJP1	Q07157	1748 aa		13.64	□□□□□ -0.23
HM13-215	ENST00000474466	HTATSF1	O43719	755 aa	Known RBP	13.63	□□□□□ -0.23
HM13-215	ENST00000474466	NBPF14	Q5TI25	921 aa		13.63	□□□□□ -0.23
HM13-215	ENST00000474466	IL17RE	Q8NFR9	667 aa		13.63	□□□□□ -0.23
HM13-215	ENST00000474466	MRS2	Q9HD23	443 aa		13.63	□□□□□ -0.23
HM13-215	ENST00000474466	LRRC4B	Q9NT99	713 aa		13.63	□□□□□ -0.23
HM13-215	ENST00000474466	ASAP1	Q9ULH1	1129 aa		13.63	□□□□□ -0.23
HM13-215	ENST00000474466	C4B	P0C0L5	1744 aa		13.63	□□□□□ -0.23
HM13-215	ENST00000474466	UBR3	Q6ZT12	1888 aa		13.63	□□□□□ -0.23
HM13-215	ENST00000474466	KDM3B	Q7LBC6	1761 aa		13.63	□□□□□ -0.23
HM13-215	ENST00000474466	NFE2L2	Q16236	605 aa		13.62	□□□□□ -0.23
HM13-215	ENST00000474466	ATG3	Q9NT62	314 aa		13.62	□□□□□ -0.23
HM13-215	ENST00000474466	CCNL1	Q9UK58	526 aa	Predicted RBP	13.62	□□□□□ -0.23
HM13-215	ENST00000474466	CASZ1	Q86V15	1759 aa		13.62	□□□□□ -0.23
HM13-215	ENST00000474466	MYH14	Q7Z406	1995 aa	Known RBP	13.62	□□□□□ -0.23
HM13-215	ENST00000474466	HMGB2	P26583	209 aa	Known RBP	13.61	□□□□□ -0.23
HM13-215	ENST00000474466	TEF	Q10587	303 aa		13.61	□□□□□ -0.23
HM13-215	ENST00000474466	RTF1	Q92541	710 aa	Known RBP	13.61	□□□□□ -0.23
HM13-215	ENST00000474466	RUNDC1	Q96C34	613 aa		13.61	□□□□□ -0.23
HM13-215	ENST00000474466	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.6	□□□□□ -0.23
HM13-215	ENST00000474466	CCDC146	Q8IYE0	955 aa		13.6	□□□□□ -0.23
HM13-215	ENST00000474466	PNISR	Q8TF01	805 aa	Known RBP	13.6	□□□□□ -0.23
HM13-215	ENST00000474466	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.6	□□□□□ -0.23
HM13-215	ENST00000474466	KCP	Q6ZWJ8	1503 aa		13.59	□□□□□ -0.23
HM13-215	ENST00000474466	LOC102724428	A0A0B4J2F2	783 aa		13.59	□□□□□ -0.23
HM13-215	ENST00000474466	TMPO	P42166	694 aa	Known RBP	13.59	□□□□□ -0.23
HM13-215	ENST00000474466	KCNQ4	P56696	695 aa		13.59	□□□□□ -0.23
HM13-215	ENST00000474466	SIK1	P57059	783 aa		13.59	□□□□□ -0.23
HM13-215	ENST00000474466	R3HDM1	Q15032	1099 aa	Known RBP	13.59	□□□□□ -0.23
HM13-215	ENST00000474466	STK32B	Q9NY57	414 aa		13.59	□□□□□ -0.23
HM13-215	ENST00000474466	PSD	A5PKW4	1024 aa	Predicted RBP	13.58	□□□□□ -0.24
HM13-215	ENST00000474466	SLC15A2	Q16348	729 aa		13.58	□□□□□ -0.24
HM13-215	ENST00000474466	MCM10	Q7L590	875 aa		13.58	□□□□□ -0.24
HM13-215	ENST00000474466	ATP6V1A	P38606	617 aa		13.57	□□□□□ -0.24
HM13-215	ENST00000474466	RIPK4	P57078	832 aa		13.57	□□□□□ -0.24
HM13-215	ENST00000474466	DCTN1	Q14203	1278 aa		13.57	□□□□□ -0.24
HM13-215	ENST00000474466	AKT1S1	Q96B36	256 aa		13.57	□□□□□ -0.24
HM13-215	ENST00000474466	RBM42	Q9BTD8	480 aa	Known RBP	13.57	□□□□□ -0.24
HM13-215	ENST00000474466	LAMB4	A4D0S4	1761 aa		13.56	□□□□□ -0.24
HM13-215	ENST00000474466	LMOD3	Q0VAK6	560 aa		13.56	□□□□□ -0.24
HM13-215	ENST00000474466	SLC39A6	Q13433	755 aa		13.56	□□□□□ -0.24
HM13-215	ENST00000474466	ZNF827	Q17R98	1081 aa		13.56	□□□□□ -0.24
HM13-215	ENST00000474466	DIEXF	Q68CQ4	756 aa	Known RBP	13.56	□□□□□ -0.24
HM13-215	ENST00000474466	SLC4A9	Q96Q91	983 aa		13.56	□□□□□ -0.24
HM13-215	ENST00000474466	COL24A1	Q17RW2	1714 aa		13.56	□□□□□ -0.24
HM13-215	ENST00000474466	LRP5	O75197	1615 aa		13.55	□□□□□ -0.24
HM13-215	ENST00000474466	PTCD1	O75127	700 aa	Known RBP	13.55	□□□□□ -0.24
HM13-215	ENST00000474466	ITPK1	Q13572	414 aa		13.55	□□□□□ -0.24
HM13-215	ENST00000474466	ZNF790	Q6PG37	636 aa		13.55	□□□□□ -0.24
HM13-215	ENST00000474466	TTC5	Q8N0Z6	440 aa		13.55	□□□□□ -0.24
HM13-215	ENST00000474466	RRP7A	Q9Y3A4	280 aa	Known RBP	13.55	□□□□□ -0.24
HM13-215	ENST00000474466	C4A	P0C0L4	1744 aa		13.54	□□□□□ -0.24
HM13-215	ENST00000474466	BTBD11	A6QL63	1104 aa		13.54	□□□□□ -0.24
HM13-215	ENST00000474466	TAF7	Q15545	349 aa	Predicted RBP	13.54	□□□□□ -0.24
HM13-215	ENST00000474466	NEUROD2	Q15784	382 aa		13.54	□□□□□ -0.24
HM13-215	ENST00000474466	LINC00116	Q8NCU8	138 aa		13.54	□□□□□ -0.24
HM13-215	ENST00000474466	CCER2	I3L3R5	266 aa		13.53	□□□□□ -0.24
HM13-215	ENST00000474466	APAF1	O14727	1248 aa		13.53	□□□□□ -0.24
HM13-215	ENST00000474466	VSIG10	Q8N0Z9	540 aa		13.53	□□□□□ -0.24
HM13-215	ENST00000474466	THUMPD2	Q9BTF0	503 aa	Known RBP	13.53	□□□□□ -0.24
HM13-215	ENST00000474466	TRIM35	Q9UPQ4	493 aa		13.53	□□□□□ -0.24
HM13-215	ENST00000474466	TFCP2L1	Q9NZI6	479 aa		13.52	□□□□□ -0.25
HM13-215	ENST00000474466	CNTNAP4	Q9C0A0	1308 aa		13.52	□□□□□ -0.25
HM13-215	ENST00000474466	HEG1	Q9ULI3	1381 aa		13.52	□□□□□ -0.25
HM13-215	ENST00000474466	PNPLA7	Q6ZV29	1317 aa		13.51	□□□□□ -0.25
HM13-215	ENST00000474466	RC3H1	Q5TC82	1133 aa	Known RBP	13.51	□□□□□ -0.25
HM13-215	ENST00000474466	ZNF496	Q96IT1	587 aa	Predicted RBP	13.51	□□□□□ -0.25
HM13-215	ENST00000474466	AK7	Q96M32	723 aa		13.51	□□□□□ -0.25
HM13-215	ENST00000474466	FMNL2	Q96PY5	1086 aa		13.51	□□□□□ -0.25
HM13-215	ENST00000474466	KCNQ3	O43525	872 aa		13.5	□□□□□ -0.25
HM13-215	ENST00000474466	DNAJC10	Q8IXB1	793 aa		13.5	□□□□□ -0.25
HM13-215	ENST00000474466	FAM9B	Q8IZU0	186 aa		13.5	□□□□□ -0.25
HM13-215	ENST00000474466	FLAD1	Q8NFF5	587 aa		13.5	□□□□□ -0.25
HM13-215	ENST00000474466	NCBP3	Q53F19	620 aa	Known RBP	13.49	□□□□□ -0.25
HM13-215	ENST00000474466	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.49	□□□□□ -0.25
HM13-215	ENST00000474466	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.49	□□□□□ -0.25
HM13-215	ENST00000474466	BABAM1	Q9NWV8	329 aa		13.49	□□□□□ -0.25
HM13-215	ENST00000474466	GNPAT	O15228	680 aa		13.48	□□□□□ -0.25
HM13-215	ENST00000474466	CYP19A1	P11511	503 aa	Predicted RBP	13.48	□□□□□ -0.25
HM13-215	ENST00000474466	KCNA4	P22459	653 aa		13.48	□□□□□ -0.25
HM13-215	ENST00000474466	SSFA2	P28290	1259 aa		13.48	□□□□□ -0.25
HM13-215	ENST00000474466	CRKL	P46109	303 aa	Known RBP	13.48	□□□□□ -0.25
HM13-215	ENST00000474466	SLC16A10	Q8TF71	515 aa		13.48	□□□□□ -0.25
HM13-215	ENST00000474466	MIS18A	Q9NYP9	233 aa		13.48	□□□□□ -0.25
HM13-215	ENST00000474466	RPS6KA4	O75676	772 aa		13.47	□□□□□ -0.25
HM13-215	ENST00000474466	CCDC27	Q2M243	656 aa		13.47	□□□□□ -0.25
HM13-215	ENST00000474466	COL23A1	Q86Y22	540 aa	Predicted RBP	13.47	□□□□□ -0.25
HM13-215	ENST00000474466	TSPYL4	Q9UJ04	414 aa		13.47	□□□□□ -0.25
HM13-215	ENST00000474466	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.46	□□□□□ -0.25
HM13-215	ENST00000474466	STARD3NL	O95772	234 aa		13.46	□□□□□ -0.25
HM13-215	ENST00000474466	SNRPA1	P09661	255 aa	Known RBP	13.46	□□□□□ -0.25

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