RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 KIAA1551Q9HCM1 1747 aa18.44■□□□□ 0.54
GAPDH-208ENST00000474249 KIF13BQ9NQT8 1826 aa18.44■□□□□ 0.54
GAPDH-208ENST00000474249 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
GAPDH-208ENST00000474249 GNPATO15228 680 aa18.43■□□□□ 0.54
GAPDH-208ENST00000474249 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
GAPDH-208ENST00000474249 EIF4A2Q14240 407 aaKnown RBP18.43■□□□□ 0.54
GAPDH-208ENST00000474249 ZNF831Q5JPB2 1677 aa18.42■□□□□ 0.54
GAPDH-208ENST00000474249 MMP10P09238 476 aa18.42■□□□□ 0.54
GAPDH-208ENST00000474249 WWC3Q9ULE0 1092 aa18.42■□□□□ 0.54
GAPDH-208ENST00000474249 PXDNLA1KZ92 1463 aa18.42■□□□□ 0.54
GAPDH-208ENST00000474249 ZNF526Q8TF50 670 aaPredicted RBP18.41■□□□□ 0.54
GAPDH-208ENST00000474249 TGFB2P61812 414 aa18.4■□□□□ 0.54
GAPDH-208ENST00000474249 RC3H1Q5TC82 1133 aaKnown RBP18.4■□□□□ 0.54
GAPDH-208ENST00000474249 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
GAPDH-208ENST00000474249 ARHGEF1Q92888 912 aaKnown RBP18.39■□□□□ 0.53
GAPDH-208ENST00000474249 TRAPPC3LQ5T215 181 aa18.38■□□□□ 0.53
GAPDH-208ENST00000474249 NLGN1Q8N2Q7 840 aa18.38■□□□□ 0.53
GAPDH-208ENST00000474249 C10orf71Q711Q0 1435 aa18.37■□□□□ 0.53
GAPDH-208ENST00000474249 GYS1P13807 737 aa18.37■□□□□ 0.53
GAPDH-208ENST00000474249 KCNA3P22001 575 aa18.37■□□□□ 0.53
GAPDH-208ENST00000474249 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
GAPDH-208ENST00000474249 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
GAPDH-208ENST00000474249 A0A0G2JLW4 131 aa18.36■□□□□ 0.53
GAPDH-208ENST00000474249 RPS6KA4O75676 772 aa18.36■□□□□ 0.53
GAPDH-208ENST00000474249 ADRA2BP18089 450 aa18.36■□□□□ 0.53
GAPDH-208ENST00000474249 DCAF5Q96JK2 942 aa18.36■□□□□ 0.53
GAPDH-208ENST00000474249 RTCBQ9Y3I0 505 aaKnown RBP18.36■□□□□ 0.53
GAPDH-208ENST00000474249 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
GAPDH-208ENST00000474249 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
GAPDH-208ENST00000474249 N4BP2Q86UW6 1770 aaPredicted RBP18.35■□□□□ 0.53
GAPDH-208ENST00000474249 DNAJC5GQ8N7S2 189 aa18.35■□□□□ 0.53
GAPDH-208ENST00000474249 KDM6AO15550 1401 aaPredicted RBP18.35■□□□□ 0.53
GAPDH-208ENST00000474249 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.53
GAPDH-208ENST00000474249 DPEP1P16444 411 aa18.33■□□□□ 0.53
GAPDH-208ENST00000474249 PCNTO95613 3336 aa18.32■□□□□ 0.52
GAPDH-208ENST00000474249 C4AP0C0L4 1744 aa18.31■□□□□ 0.52
GAPDH-208ENST00000474249 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
GAPDH-208ENST00000474249 TNNT2P45379 298 aaPredicted RBP18.31■□□□□ 0.52
GAPDH-208ENST00000474249 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
GAPDH-208ENST00000474249 TOMM70O94826 608 aa18.3■□□□□ 0.52
GAPDH-208ENST00000474249 PLEKHO1Q53GL0 409 aaPredicted RBP18.3■□□□□ 0.52
GAPDH-208ENST00000474249 BCS1LQ9Y276 419 aa18.3■□□□□ 0.52
GAPDH-208ENST00000474249 AMOTQ4VCS5 1084 aa18.29■□□□□ 0.52
GAPDH-208ENST00000474249 RFC4P35249 363 aa18.28■□□□□ 0.52
GAPDH-208ENST00000474249 ARHGAP27Q6ZUM4 889 aa18.28■□□□□ 0.52
GAPDH-208ENST00000474249 AEBP1Q8IUX7 1158 aa18.28■□□□□ 0.52
GAPDH-208ENST00000474249 CCDC87Q9NVE4 849 aa18.28■□□□□ 0.52
GAPDH-208ENST00000474249 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
GAPDH-208ENST00000474249 APLP1P51693 650 aa18.27■□□□□ 0.52
GAPDH-208ENST00000474249 CABP4P57796 275 aa18.27■□□□□ 0.52
GAPDH-208ENST00000474249 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.52
GAPDH-208ENST00000474249 NFATC2IPQ8NCF5 419 aa18.27■□□□□ 0.52
GAPDH-208ENST00000474249 PANK3Q9H999 370 aa18.27■□□□□ 0.52
GAPDH-208ENST00000474249 NMRK2Q9NPI5 230 aa18.27■□□□□ 0.52
GAPDH-208ENST00000474249 CRKLP46109 303 aaKnown RBP18.26■□□□□ 0.51
GAPDH-208ENST00000474249 DDR1Q08345 913 aa18.26■□□□□ 0.51
GAPDH-208ENST00000474249 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
GAPDH-208ENST00000474249 INTS5Q6P9B9 1019 aaKnown RBP18.26■□□□□ 0.51
GAPDH-208ENST00000474249 PARP3Q9Y6F1 533 aa18.26■□□□□ 0.51
GAPDH-208ENST00000474249 ARFGEF1Q9Y6D6 1849 aa18.26■□□□□ 0.51
GAPDH-208ENST00000474249 FCHSD2O94868 740 aa18.25■□□□□ 0.51
GAPDH-208ENST00000474249 TM4SF1P30408 202 aa18.25■□□□□ 0.51
GAPDH-208ENST00000474249 MTHFSP49914 203 aa18.25■□□□□ 0.51
GAPDH-208ENST00000474249 FKBP8Q14318 412 aa18.25■□□□□ 0.51
GAPDH-208ENST00000474249 SRP68Q9UHB9 627 aaKnown RBP18.25■□□□□ 0.51
GAPDH-208ENST00000474249 USP42Q9H9J4 1324 aaKnown RBP18.25■□□□□ 0.51
GAPDH-208ENST00000474249 PTCD1O75127 700 aaKnown RBP18.24■□□□□ 0.51
GAPDH-208ENST00000474249 IL13P35225 146 aa18.23■□□□□ 0.51
GAPDH-208ENST00000474249 C9orf131Q5VYM1 1079 aa18.23■□□□□ 0.51
GAPDH-208ENST00000474249 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
GAPDH-208ENST00000474249 TJP1Q07157 1748 aa18.23■□□□□ 0.51
GAPDH-208ENST00000474249 RBM46Q8TBY0 533 aaKnown RBP18.23■□□□□ 0.51
GAPDH-208ENST00000474249 POLRMTO00411 1230 aaKnown RBP18.22■□□□□ 0.51
GAPDH-208ENST00000474249 CLSPNQ9HAW4 1339 aa18.21■□□□□ 0.51
GAPDH-208ENST00000474249 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.51
GAPDH-208ENST00000474249 SCN11AQ9UI33 1791 aa18.2■□□□□ 0.5
GAPDH-208ENST00000474249 HSPA5P11021 654 aaKnown RBP18.2■□□□□ 0.5
GAPDH-208ENST00000474249 DALRD3Q5D0E6 543 aaKnown RBP18.2■□□□□ 0.5
GAPDH-208ENST00000474249 SBF1O95248 1867 aa18.19■□□□□ 0.5
GAPDH-208ENST00000474249 CHRNA5P30532 468 aa18.19■□□□□ 0.5
GAPDH-208ENST00000474249 C1orf141Q5JVX7 400 aa18.19■□□□□ 0.5
GAPDH-208ENST00000474249 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
GAPDH-208ENST00000474249 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
GAPDH-208ENST00000474249 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
GAPDH-208ENST00000474249 JMYQ8N9B5 988 aa18.18■□□□□ 0.5
GAPDH-208ENST00000474249 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
GAPDH-208ENST00000474249 SOS1Q07889 1333 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-208ENST00000474249 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
GAPDH-208ENST00000474249 FSTL1Q12841 308 aa18.17■□□□□ 0.5
GAPDH-208ENST00000474249 AKAP4Q5JQC9 854 aa18.17■□□□□ 0.5
GAPDH-208ENST00000474249 MORC1Q86VD1 984 aa18.17■□□□□ 0.5
GAPDH-208ENST00000474249 DNAJC10Q8IXB1 793 aa18.17■□□□□ 0.5
GAPDH-208ENST00000474249 BCL2L12Q9HB09 334 aa18.17■□□□□ 0.5
GAPDH-208ENST00000474249 PRELPP51888 382 aa18.16■□□□□ 0.5
GAPDH-208ENST00000474249 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
GAPDH-208ENST00000474249 KCPQ6ZWJ8 1503 aa18.16■□□□□ 0.5
GAPDH-208ENST00000474249 WDR90Q96KV7 1748 aa18.16■□□□□ 0.5
GAPDH-208ENST00000474249 NRXN2Q9P2S2 1712 aa18.15■□□□□ 0.5
GAPDH-208ENST00000474249 MRC1P22897 1456 aa18.15■□□□□ 0.5
GAPDH-208ENST00000474249 HTRA3P83110 453 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 825.5 ms