RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 LMOD3Q0VAK6 560 aa25.02■■□□□ 1.6
CTDSP1-207ENST00000473420 APAF1O14727 1248 aa25■■□□□ 1.59
CTDSP1-207ENST00000473420 TEFQ10587 303 aa25■■□□□ 1.59
CTDSP1-207ENST00000473420 NFATC2IPQ8NCF5 419 aa25■■□□□ 1.59
CTDSP1-207ENST00000473420 CAMKK2Q96RR4 588 aa25■■□□□ 1.59
CTDSP1-207ENST00000473420 ZNF831Q5JPB2 1677 aa24.99■■□□□ 1.59
CTDSP1-207ENST00000473420 MCM10Q7L590 875 aa24.99■■□□□ 1.59
CTDSP1-207ENST00000473420 DEFB132Q7Z7B7 95 aa24.99■■□□□ 1.59
CTDSP1-207ENST00000473420 SMARCC1Q92922 1105 aaPredicted RBP24.99■■□□□ 1.59
CTDSP1-207ENST00000473420 NUP188Q5SRE5 1749 aa24.98■■□□□ 1.59
CTDSP1-207ENST00000473420 EN1Q05925 392 aaPredicted RBP24.98■■□□□ 1.59
CTDSP1-207ENST00000473420 NCBP3Q53F19 620 aaKnown RBP24.98■■□□□ 1.59
CTDSP1-207ENST00000473420 UBR2Q8IWV8 1755 aa24.98■■□□□ 1.59
CTDSP1-207ENST00000473420 PALLDQ8WX93 1383 aa24.97■■□□□ 1.59
CTDSP1-207ENST00000473420 RRP7AQ9Y3A4 280 aaKnown RBP24.97■■□□□ 1.59
CTDSP1-207ENST00000473420 DCTN1Q14203 1278 aa24.96■■□□□ 1.59
CTDSP1-207ENST00000473420 NEUROD2Q15784 382 aa24.96■■□□□ 1.59
CTDSP1-207ENST00000473420 EZH2Q15910 746 aaKnown RBP24.95■■□□□ 1.58
CTDSP1-207ENST00000473420 TRIM35Q9UPQ4 493 aa24.95■■□□□ 1.58
CTDSP1-207ENST00000473420 CICQ96RK0 1608 aaPredicted RBP24.94■■□□□ 1.58
CTDSP1-207ENST00000473420 ATG3Q9NT62 314 aa24.94■■□□□ 1.58
CTDSP1-207ENST00000473420 ASAP1Q9ULH1 1129 aa24.94■■□□□ 1.58
CTDSP1-207ENST00000473420 KDM3BQ7LBC6 1761 aa24.94■■□□□ 1.58
CTDSP1-207ENST00000473420 TAF1LQ8IZX4 1826 aa24.93■■□□□ 1.58
CTDSP1-207ENST00000473420 TXNRD1Q16881 649 aa24.92■■□□□ 1.58
CTDSP1-207ENST00000473420 CCDC27Q2M243 656 aa24.92■■□□□ 1.58
CTDSP1-207ENST00000473420 SLC27A3Q5K4L6 730 aa24.92■■□□□ 1.58
CTDSP1-207ENST00000473420 NGEFQ8N5V2 710 aa24.91■■□□□ 1.58
CTDSP1-207ENST00000473420 KCPQ6ZWJ8 1503 aa24.91■■□□□ 1.58
CTDSP1-207ENST00000473420 C5P01031 1676 aa24.91■■□□□ 1.58
CTDSP1-207ENST00000473420 TAF7Q15545 349 aaPredicted RBP24.9■■□□□ 1.58
CTDSP1-207ENST00000473420 PROM2Q8N271 834 aa24.9■■□□□ 1.58
CTDSP1-207ENST00000473420 BTBD11A6QL63 1104 aa24.89■■□□□ 1.58
CTDSP1-207ENST00000473420 THUMPD2Q9BTF0 503 aaKnown RBP24.89■■□□□ 1.58
CTDSP1-207ENST00000473420 HMGB2P26583 209 aaKnown RBP24.88■■□□□ 1.57
CTDSP1-207ENST00000473420 TJP1Q07157 1748 aa24.87■■□□□ 1.57
CTDSP1-207ENST00000473420 ZNF790Q6PG37 636 aa24.87■■□□□ 1.57
CTDSP1-207ENST00000473420 TTC5Q8N0Z6 440 aa24.87■■□□□ 1.57
CTDSP1-207ENST00000473420 BABAM1Q9NWV8 329 aa24.87■■□□□ 1.57
CTDSP1-207ENST00000473420 CCNL1Q9UK58 526 aaPredicted RBP24.87■■□□□ 1.57
CTDSP1-207ENST00000473420 COL5A3P25940 1745 aaPredicted RBP24.86■■□□□ 1.57
CTDSP1-207ENST00000473420 LOC102724428A0A0B4J2F2 783 aa24.86■■□□□ 1.57
CTDSP1-207ENST00000473420 SIK1P57059 783 aa24.86■■□□□ 1.57
CTDSP1-207ENST00000473420 CALD1Q05682 793 aaKnown RBP24.86■■□□□ 1.57
CTDSP1-207ENST00000473420 SLC39A6Q13433 755 aa24.86■■□□□ 1.57
CTDSP1-207ENST00000473420 LRRC4BQ9NT99 713 aa24.85■■□□□ 1.57
CTDSP1-207ENST00000473420 WWC1Q8IX03 1113 aa24.83■■□□□ 1.57
CTDSP1-207ENST00000473420 RBM42Q9BTD8 480 aaKnown RBP24.83■■□□□ 1.57
CTDSP1-207ENST00000473420 PTCD1O75127 700 aaKnown RBP24.82■■□□□ 1.56
CTDSP1-207ENST00000473420 C4BP0C0L5 1744 aa24.82■■□□□ 1.56
CTDSP1-207ENST00000473420 VSIG10Q8N0Z9 540 aa24.82■■□□□ 1.56
CTDSP1-207ENST00000473420 QSER1Q2KHR3 1735 aa24.81■■□□□ 1.56
CTDSP1-207ENST00000473420 ATP6V1AP38606 617 aa24.81■■□□□ 1.56
CTDSP1-207ENST00000473420 FMNL2Q96PY5 1086 aa24.81■■□□□ 1.56
CTDSP1-207ENST00000473420 SLC4A9Q96Q91 983 aa24.81■■□□□ 1.56
CTDSP1-207ENST00000473420 CFAP44Q96MT7 982 aa24.8■■□□□ 1.56
CTDSP1-207ENST00000473420 HEG1Q9ULI3 1381 aa24.8■■□□□ 1.56
CTDSP1-207ENST00000473420 CHL1O00533 1208 aa24.79■■□□□ 1.56
CTDSP1-207ENST00000473420 NBPF14Q5TI25 921 aa24.79■■□□□ 1.56
CTDSP1-207ENST00000473420 ZNF496Q96IT1 587 aaPredicted RBP24.79■■□□□ 1.56
CTDSP1-207ENST00000473420 IFT57Q9NWB7 429 aa24.79■■□□□ 1.56
CTDSP1-207ENST00000473420 TSPYL4Q9UJ04 414 aa24.79■■□□□ 1.56
CTDSP1-207ENST00000473420 LAMB4A4D0S4 1761 aa24.79■■□□□ 1.56
CTDSP1-207ENST00000473420 IL16Q14005 1332 aa24.79■■□□□ 1.56
CTDSP1-207ENST00000473420 SENP3-EIF4A1A0A087X0R7 540 aa24.78■■□□□ 1.56
CTDSP1-207ENST00000473420 KCNQ3O43525 872 aa24.78■■□□□ 1.56
CTDSP1-207ENST00000473420 ZNF853P0CG23 659 aa24.78■■□□□ 1.56
CTDSP1-207ENST00000473420 KCNQ4P56696 695 aa24.78■■□□□ 1.56
CTDSP1-207ENST00000473420 GNAI1P63096 354 aa24.78■■□□□ 1.56
CTDSP1-207ENST00000473420 WDR63Q8IWG1 891 aa24.78■■□□□ 1.56
CTDSP1-207ENST00000473420 MIS18AQ9NYP9 233 aa24.78■■□□□ 1.56
CTDSP1-207ENST00000473420 TUBGCP6Q96RT7 1819 aa24.77■■□□□ 1.56
CTDSP1-207ENST00000473420 ITPK1Q13572 414 aa24.77■■□□□ 1.56
CTDSP1-207ENST00000473420 SALL2Q9Y467 1007 aaPredicted RBP24.76■■□□□ 1.55
CTDSP1-207ENST00000473420 UBR3Q6ZT12 1888 aa24.75■■□□□ 1.55
CTDSP1-207ENST00000473420 TEX13AQ9BXU3 409 aaPredicted RBP24.75■■□□□ 1.55
CTDSP1-207ENST00000473420 ZNF521Q96K83 1311 aa24.75■■□□□ 1.55
CTDSP1-207ENST00000473420 EIF4A1P60842 406 aaKnown RBP24.74■■□□□ 1.55
CTDSP1-207ENST00000473420 LINC00116Q8NCU8 138 aa24.74■■□□□ 1.55
CTDSP1-207ENST00000473420 AKT1S1Q96B36 256 aa24.74■■□□□ 1.55
CTDSP1-207ENST00000473420 ANO8Q9HCE9 1232 aaPredicted RBP24.74■■□□□ 1.55
CTDSP1-207ENST00000473420 STK32BQ9NY57 414 aa24.74■■□□□ 1.55
CTDSP1-207ENST00000473420 LAS1LQ9Y4W2 734 aaKnown RBP24.74■■□□□ 1.55
CTDSP1-207ENST00000473420 MYH14Q7Z406 1995 aaKnown RBP24.73■■□□□ 1.55
CTDSP1-207ENST00000473420 CNTNAP4Q9C0A0 1308 aa24.73■■□□□ 1.55
CTDSP1-207ENST00000473420 SLC15A2Q16348 729 aa24.73■■□□□ 1.55
CTDSP1-207ENST00000473420 SNRPA1P09661 255 aaKnown RBP24.72■■□□□ 1.55
CTDSP1-207ENST00000473420 DNAJC10Q8IXB1 793 aa24.72■■□□□ 1.55
CTDSP1-207ENST00000473420 MBIPQ9NS73 344 aa24.72■■□□□ 1.55
CTDSP1-207ENST00000473420 ZNF827Q17R98 1081 aa24.71■■□□□ 1.55
CTDSP1-207ENST00000473420 RC3H1Q5TC82 1133 aaKnown RBP24.71■■□□□ 1.55
CTDSP1-207ENST00000473420 CYP19A1P11511 503 aaPredicted RBP24.69■■□□□ 1.54
CTDSP1-207ENST00000473420 AK7Q96M32 723 aa24.69■■□□□ 1.54
CTDSP1-207ENST00000473420 GIGYF1O75420 1035 aaPredicted RBP24.68■■□□□ 1.54
CTDSP1-207ENST00000473420 STARD3NLO95772 234 aa24.68■■□□□ 1.54
CTDSP1-207ENST00000473420 CRKLP46109 303 aaKnown RBP24.68■■□□□ 1.54
CTDSP1-207ENST00000473420 CASZ1Q86V15 1759 aa24.67■■□□□ 1.54
CTDSP1-207ENST00000473420 TFCP2L1Q9NZI6 479 aa24.66■■□□□ 1.54
CTDSP1-207ENST00000473420 HOXB7P09629 217 aa24.65■■□□□ 1.54
CTDSP1-207ENST00000473420 HNRNPUQ00839 825 aaKnown RBP eCLIP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms