RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
NUDCD3-205ENST00000472246 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
NUDCD3-205ENST00000472246 GNPATO15228 680 aa13.47□□□□□ -0.25
NUDCD3-205ENST00000472246 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
NUDCD3-205ENST00000472246 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.25
NUDCD3-205ENST00000472246 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
NUDCD3-205ENST00000472246 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
NUDCD3-205ENST00000472246 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.25
NUDCD3-205ENST00000472246 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
NUDCD3-205ENST00000472246 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
NUDCD3-205ENST00000472246 KNSTRNQ9Y448 316 aa13.45□□□□□ -0.26
NUDCD3-205ENST00000472246 KIF7Q2M1P5 1343 aa13.44□□□□□ -0.26
NUDCD3-205ENST00000472246 ZNF831Q5JPB2 1677 aa13.44□□□□□ -0.26
NUDCD3-205ENST00000472246 ERVV-2B6SEH9 535 aa13.44□□□□□ -0.26
NUDCD3-205ENST00000472246 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
NUDCD3-205ENST00000472246 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
NUDCD3-205ENST00000472246 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
NUDCD3-205ENST00000472246 CABP4P57796 275 aa13.43□□□□□ -0.26
NUDCD3-205ENST00000472246 AMOTQ4VCS5 1084 aa13.43□□□□□ -0.26
NUDCD3-205ENST00000472246 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
NUDCD3-205ENST00000472246 SULT6B1Q6IMI4 303 aa13.43□□□□□ -0.26
NUDCD3-205ENST00000472246 IL13P35225 146 aa13.42□□□□□ -0.26
NUDCD3-205ENST00000472246 C1QTNF8P60827 252 aa13.42□□□□□ -0.26
NUDCD3-205ENST00000472246 C1orf141Q5JVX7 400 aa13.42□□□□□ -0.26
NUDCD3-205ENST00000472246 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
NUDCD3-205ENST00000472246 MYH14Q7Z406 1995 aaKnown RBP13.41□□□□□ -0.26
NUDCD3-205ENST00000472246 SCN11AQ9UI33 1791 aa13.41□□□□□ -0.26
NUDCD3-205ENST00000472246 MTHFSP49914 203 aa13.41□□□□□ -0.26
NUDCD3-205ENST00000472246 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
NUDCD3-205ENST00000472246 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
NUDCD3-205ENST00000472246 TJP1Q07157 1748 aa13.4□□□□□ -0.26
NUDCD3-205ENST00000472246 KIAA1551Q9HCM1 1747 aa13.4□□□□□ -0.26
NUDCD3-205ENST00000472246 PTCD1O75127 700 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-205ENST00000472246 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
NUDCD3-205ENST00000472246 MMP10P09238 476 aa13.4□□□□□ -0.26
NUDCD3-205ENST00000472246 TRAPPC3LQ5T215 181 aa13.4□□□□□ -0.26
NUDCD3-205ENST00000472246 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
NUDCD3-205ENST00000472246 ATP10DQ9P241 1426 aa13.39□□□□□ -0.27
NUDCD3-205ENST00000472246 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
NUDCD3-205ENST00000472246 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
NUDCD3-205ENST00000472246 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-205ENST00000472246 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
NUDCD3-205ENST00000472246 N4BP2Q86UW6 1770 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-205ENST00000472246 PXDNLA1KZ92 1463 aa13.38□□□□□ -0.27
NUDCD3-205ENST00000472246 HMOX1P09601 288 aa13.38□□□□□ -0.27
NUDCD3-205ENST00000472246 RC3H1Q5TC82 1133 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-205ENST00000472246 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-205ENST00000472246 ADCY9O60503 1353 aa13.37□□□□□ -0.27
NUDCD3-205ENST00000472246 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
NUDCD3-205ENST00000472246 RPS6KA4O75676 772 aa13.37□□□□□ -0.27
NUDCD3-205ENST00000472246 GYS1P13807 737 aa13.37□□□□□ -0.27
NUDCD3-205ENST00000472246 CC2D1BQ5T0F9 858 aaKnown RBP13.37□□□□□ -0.27
NUDCD3-205ENST00000472246 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
NUDCD3-205ENST00000472246 ADRA2BP18089 450 aa13.36□□□□□ -0.27
NUDCD3-205ENST00000472246 RFC4P35249 363 aa13.36□□□□□ -0.27
NUDCD3-205ENST00000472246 CRKLP46109 303 aaKnown RBP13.36□□□□□ -0.27
NUDCD3-205ENST00000472246 AKAP4Q5JQC9 854 aa13.36□□□□□ -0.27
NUDCD3-205ENST00000472246 NLGN1Q8N2Q7 840 aa13.36□□□□□ -0.27
NUDCD3-205ENST00000472246 MRC1P22897 1456 aa13.36□□□□□ -0.27
NUDCD3-205ENST00000472246 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-205ENST00000472246 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
NUDCD3-205ENST00000472246 SRP68Q9UHB9 627 aaKnown RBP13.35□□□□□ -0.27
NUDCD3-205ENST00000472246 ZNF526Q8TF50 670 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-205ENST00000472246 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
NUDCD3-205ENST00000472246 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-205ENST00000472246 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
NUDCD3-205ENST00000472246 A0A0G2JLW4 131 aa13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 DIAPH1O60610 1272 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 SLC39A6Q13433 755 aa13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 DNAJC10Q8IXB1 793 aa13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 CCDC87Q9NVE4 849 aa13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 PARP3Q9Y6F1 533 aa13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.28
NUDCD3-205ENST00000472246 BRCA1P38398 1863 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-205ENST00000472246 TGFB2P61812 414 aa13.32□□□□□ -0.28
NUDCD3-205ENST00000472246 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-205ENST00000472246 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-205ENST00000472246 BCS1LQ9Y276 419 aa13.32□□□□□ -0.28
NUDCD3-205ENST00000472246 USP42Q9H9J4 1324 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-205ENST00000472246 DPEP1P16444 411 aa13.31□□□□□ -0.28
NUDCD3-205ENST00000472246 FKBP8Q14318 412 aa13.31□□□□□ -0.28
NUDCD3-205ENST00000472246 DDR1Q08345 913 aa13.3□□□□□ -0.28
NUDCD3-205ENST00000472246 UBR2Q8IWV8 1755 aa13.3□□□□□ -0.28
NUDCD3-205ENST00000472246 SOS1Q07889 1333 aaPredicted RBP13.29□□□□□ -0.28
NUDCD3-205ENST00000472246 NPC1L1Q9UHC9 1359 aa13.29□□□□□ -0.28
NUDCD3-205ENST00000472246 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
NUDCD3-205ENST00000472246 FCHSD2O94868 740 aa13.28□□□□□ -0.28
NUDCD3-205ENST00000472246 CYP19A1P11511 503 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-205ENST00000472246 ZBTB1Q9Y2K1 713 aa13.28□□□□□ -0.28
NUDCD3-205ENST00000472246 CEP350Q5VT06 3117 aa13.28□□□□□ -0.28
NUDCD3-205ENST00000472246 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.28
NUDCD3-205ENST00000472246 POLRMTO00411 1230 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-205ENST00000472246 KCNA3P22001 575 aa13.27□□□□□ -0.29
NUDCD3-205ENST00000472246 USPL1Q5W0Q7 1092 aa13.27□□□□□ -0.29
NUDCD3-205ENST00000472246 COL15A1P39059 1388 aa13.27□□□□□ -0.29
NUDCD3-205ENST00000472246 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-205ENST00000472246 ZPR1O75312 459 aa13.26□□□□□ -0.29
NUDCD3-205ENST00000472246 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms