RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	C8orf58	Q8NAV2	365 aa		13.85	□□□□□ -0.19
RPS18-231	ENST00000472218	SSH1	Q8WYL5	1049 aa		13.85	□□□□□ -0.19
RPS18-231	ENST00000472218	NGLY1	Q96IV0	654 aa		13.85	□□□□□ -0.19
RPS18-231	ENST00000472218	PPP4R2	Q9NY27	417 aa		13.85	□□□□□ -0.19
RPS18-231	ENST00000472218	PLCH1	Q4KWH8	1693 aa		13.85	□□□□□ -0.19
RPS18-231	ENST00000472218	KDM6A	O15550	1401 aa	Predicted RBP	13.84	□□□□□ -0.19
RPS18-231	ENST00000472218	EXOC5	O00471	708 aa		13.84	□□□□□ -0.19
RPS18-231	ENST00000472218	ZKSCAN2	Q63HK3	967 aa		13.84	□□□□□ -0.19
RPS18-231	ENST00000472218	NRAP	Q86VF7	1730 aa		13.84	□□□□□ -0.19
RPS18-231	ENST00000472218	BCL9L	Q86UU0	1499 aa		13.83	□□□□□ -0.2
RPS18-231	ENST00000472218	CANX	P27824	592 aa	Known RBP	13.83	□□□□□ -0.2
RPS18-231	ENST00000472218	TSPYL6	Q8N831	410 aa		13.83	□□□□□ -0.2
RPS18-231	ENST00000472218	HEG1	Q9ULI3	1381 aa		13.83	□□□□□ -0.2
RPS18-231	ENST00000472218	EIF4A1	P60842	406 aa	Known RBP	13.82	□□□□□ -0.2
RPS18-231	ENST00000472218	CCDC30	Q5VVM6	783 aa		13.82	□□□□□ -0.2
RPS18-231	ENST00000472218	ATF7IP	Q6VMQ6	1270 aa		13.82	□□□□□ -0.2
RPS18-231	ENST00000472218	C8orf37	Q96NL8	207 aa		13.82	□□□□□ -0.2
RPS18-231	ENST00000472218	TNS2	Q63HR2	1409 aa		13.81	□□□□□ -0.2
RPS18-231	ENST00000472218	CABP4	P57796	275 aa		13.81	□□□□□ -0.2
RPS18-231	ENST00000472218	MRPL50	Q8N5N7	158 aa	Known RBP	13.81	□□□□□ -0.2
RPS18-231	ENST00000472218	CHMP4B	Q9H444	224 aa	Known RBP	13.81	□□□□□ -0.2
RPS18-231	ENST00000472218	PTPRC	P08575	1304 aa		13.81	□□□□□ -0.2
RPS18-231	ENST00000472218	PLIN1	O60240	522 aa		13.8	□□□□□ -0.2
RPS18-231	ENST00000472218	MEX3C	Q5U5Q3	659 aa	Known RBP	13.8	□□□□□ -0.2
RPS18-231	ENST00000472218	ZNF790	Q6PG37	636 aa		13.8	□□□□□ -0.2
RPS18-231	ENST00000472218	STK31	Q9BXU1	1019 aa		13.8	□□□□□ -0.2
RPS18-231	ENST00000472218	API5	Q9BZZ5	524 aa	Known RBP	13.8	□□□□□ -0.2
RPS18-231	ENST00000472218	MIS18A	Q9NYP9	233 aa		13.8	□□□□□ -0.2
RPS18-231	ENST00000472218	USP35	Q9P2H5	1018 aa		13.8	□□□□□ -0.2
RPS18-231	ENST00000472218	USP21	Q9UK80	565 aa		13.8	□□□□□ -0.2
RPS18-231	ENST00000472218	DDB1	Q16531	1140 aa		13.79	□□□□□ -0.2
RPS18-231	ENST00000472218	DZIP1L	Q8IYY4	767 aa	Known RBP	13.79	□□□□□ -0.2
RPS18-231	ENST00000472218	NFATC2IP	Q8NCF5	419 aa		13.79	□□□□□ -0.2
RPS18-231	ENST00000472218	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.78	□□□□□ -0.2
RPS18-231	ENST00000472218	FTSJ3	Q8IY81	847 aa	Known RBP	13.78	□□□□□ -0.2
RPS18-231	ENST00000472218	TTC5	Q8N0Z6	440 aa		13.78	□□□□□ -0.2
RPS18-231	ENST00000472218	DDX54	Q8TDD1	881 aa	Known RBP	13.78	□□□□□ -0.2
RPS18-231	ENST00000472218	FRAT1	Q92837	279 aa	Predicted RBP	13.78	□□□□□ -0.2
RPS18-231	ENST00000472218	NOB1	Q9ULX3	412 aa	Known RBP	13.78	□□□□□ -0.2
RPS18-231	ENST00000472218	SCN11A	Q9UI33	1791 aa		13.78	□□□□□ -0.2
RPS18-231	ENST00000472218	ELL2	O00472	640 aa	Predicted RBP	13.77	□□□□□ -0.21
RPS18-231	ENST00000472218	GIGYF1	O75420	1035 aa	Predicted RBP	13.77	□□□□□ -0.21
RPS18-231	ENST00000472218	TRIM27	P14373	513 aa		13.77	□□□□□ -0.21
RPS18-231	ENST00000472218	IRX6	P78412	446 aa	Predicted RBP	13.77	□□□□□ -0.21
RPS18-231	ENST00000472218	FMNL2	Q96PY5	1086 aa		13.77	□□□□□ -0.21
RPS18-231	ENST00000472218	BCL2L13	Q9BXK5	485 aa		13.77	□□□□□ -0.21
RPS18-231	ENST00000472218	TRPC5	Q9UL62	973 aa	Predicted RBP	13.77	□□□□□ -0.21
RPS18-231	ENST00000472218	KDM3B	Q7LBC6	1761 aa		13.76	□□□□□ -0.21
RPS18-231	ENST00000472218	ONECUT3	O60422	494 aa	Predicted RBP	13.76	□□□□□ -0.21
RPS18-231	ENST00000472218	HDGFL1	Q5TGJ6	251 aa		13.76	□□□□□ -0.21
RPS18-231	ENST00000472218	CRBN	Q96SW2	442 aa		13.76	□□□□□ -0.21
RPS18-231	ENST00000472218	DDX19B	Q9UMR2	479 aa		13.76	□□□□□ -0.21
RPS18-231	ENST00000472218	CCDC9	Q9Y3X0	531 aa	Known RBP	13.76	□□□□□ -0.21
RPS18-231	ENST00000472218	SIPA1L3	O60292	1781 aa	Predicted RBP	13.76	□□□□□ -0.21
RPS18-231	ENST00000472218	ATRN	O75882	1429 aa		13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	AFF2	P51816	1311 aa		13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	ERBB4	Q15303	1308 aa		13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	SLC4A2	P04920	1241 aa		13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	SNRPA1	P09661	255 aa	Known RBP	13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	MVP	Q14764	893 aa	Known RBP	13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	KRT24	Q2M2I5	525 aa		13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	C20orf194	Q5TEA3	1177 aa		13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	EXOC6	Q8TAG9	804 aa		13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	TMOD3	Q9NYL9	352 aa		13.75	□□□□□ -0.21
RPS18-231	ENST00000472218	BCL9	O00512	1426 aa		13.74	□□□□□ -0.21
RPS18-231	ENST00000472218	ABCC4	O15439	1325 aa		13.74	□□□□□ -0.21
RPS18-231	ENST00000472218	ZNF772	Q68DY9	489 aa	Predicted RBP	13.74	□□□□□ -0.21
RPS18-231	ENST00000472218	VSIG10	Q8N0Z9	540 aa		13.74	□□□□□ -0.21
RPS18-231	ENST00000472218	GJD4	Q96KN9	370 aa	Predicted RBP	13.74	□□□□□ -0.21
RPS18-231	ENST00000472218	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.74	□□□□□ -0.21
RPS18-231	ENST00000472218	DBF4	Q9UBU7	674 aa	Predicted RBP	13.74	□□□□□ -0.21
RPS18-231	ENST00000472218	WNK3	Q9BYP7	1800 aa		13.73	□□□□□ -0.21
RPS18-231	ENST00000472218	SHANK3	Q9BYB0	1731 aa		13.73	□□□□□ -0.21
RPS18-231	ENST00000472218	KCNQ3	O43525	872 aa		13.72	□□□□□ -0.21
RPS18-231	ENST00000472218	PANK1	Q8TE04	598 aa		13.72	□□□□□ -0.21
RPS18-231	ENST00000472218	ZNF496	Q96IT1	587 aa	Predicted RBP	13.72	□□□□□ -0.21
RPS18-231	ENST00000472218	CCDC136	Q96JN2	1154 aa		13.72	□□□□□ -0.21
RPS18-231	ENST00000472218	HYPK	Q9NX55	129 aa		13.72	□□□□□ -0.21
RPS18-231	ENST00000472218	RGS17	Q9UGC6	210 aa	Predicted RBP	13.72	□□□□□ -0.21
RPS18-231	ENST00000472218	RLBP1	P12271	317 aa		13.71	□□□□□ -0.21
RPS18-231	ENST00000472218	INTS3	Q68E01	1043 aa	Known RBP	13.71	□□□□□ -0.21
RPS18-231	ENST00000472218	PELP1	Q8IZL8	1130 aa	Known RBP	13.71	□□□□□ -0.21
RPS18-231	ENST00000472218	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
RPS18-231	ENST00000472218	CCT4	P50991	539 aa	Known RBP	13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	FLII	Q13045	1269 aa		13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	SLC39A6	Q13433	755 aa		13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	FAM98C	Q17RN3	349 aa	Known RBP	13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	MARCH10	Q8NA82	808 aa	Predicted RBP	13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	PIGB	Q92521	554 aa		13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	CLUAP1	Q96AJ1	413 aa		13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	COG6	Q9Y2V7	657 aa		13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	CACNA1F	O60840	1977 aa		13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.7	□□□□□ -0.22
RPS18-231	ENST00000472218	PXDNL	A1KZ92	1463 aa		13.68	□□□□□ -0.22
RPS18-231	ENST00000472218	RGS12	O14924	1447 aa		13.68	□□□□□ -0.22
RPS18-231	ENST00000472218	EIF2S2	P20042	333 aa	Known RBP	13.68	□□□□□ -0.22
RPS18-231	ENST00000472218	ITPRIP	Q8IWB1	547 aa		13.68	□□□□□ -0.22
RPS18-231	ENST00000472218	TMEM57	Q8N5G2	664 aa		13.68	□□□□□ -0.22
RPS18-231	ENST00000472218	SMARCC1	Q92922	1105 aa	Predicted RBP	13.68	□□□□□ -0.22
RPS18-231	ENST00000472218	THSD7A	Q9UPZ6	1657 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms