RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 C10orf71Q711Q0 1435 aa26.62■■□□□ 1.85
SORT1-203ENST00000471996 TMF1P82094 1093 aa26.61■■□□□ 1.85
SORT1-203ENST00000471996 TRAPPC3LQ5T215 181 aa26.61■■□□□ 1.85
SORT1-203ENST00000471996 KIAA1551Q9HCM1 1747 aa26.61■■□□□ 1.85
SORT1-203ENST00000471996 KIF13BQ9NQT8 1826 aa26.6■■□□□ 1.85
SORT1-203ENST00000471996 TONSLQ96HA7 1378 aa26.6■■□□□ 1.85
SORT1-203ENST00000471996 FCHSD2O94868 740 aa26.6■■□□□ 1.85
SORT1-203ENST00000471996 DPEP1P16444 411 aa26.6■■□□□ 1.85
SORT1-203ENST00000471996 COL13A1Q5TAT6 717 aaPredicted RBP26.6■■□□□ 1.85
SORT1-203ENST00000471996 JMYQ8N9B5 988 aa26.6■■□□□ 1.85
SORT1-203ENST00000471996 ATG3Q9NT62 314 aa26.6■■□□□ 1.85
SORT1-203ENST00000471996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.6■■□□□ 1.85
SORT1-203ENST00000471996 RTCBQ9Y3I0 505 aaKnown RBP26.6■■□□□ 1.85
SORT1-203ENST00000471996 EMILIN1Q9Y6C2 1016 aa26.6■■□□□ 1.85
SORT1-203ENST00000471996 CCDC87Q9NVE4 849 aa26.59■■□□□ 1.85
SORT1-203ENST00000471996 HTRA3P83110 453 aa26.58■■□□□ 1.85
SORT1-203ENST00000471996 C9orf131Q5VYM1 1079 aa26.58■■□□□ 1.85
SORT1-203ENST00000471996 C16orf71Q8IYS4 520 aaPredicted RBP26.58■■□□□ 1.85
SORT1-203ENST00000471996 FSTL1Q12841 308 aa26.57■■□□□ 1.84
SORT1-203ENST00000471996 WDR90Q96KV7 1748 aa26.56■■□□□ 1.84
SORT1-203ENST00000471996 N4BP2Q86UW6 1770 aaPredicted RBP26.56■■□□□ 1.84
SORT1-203ENST00000471996 PHKG2P15735 406 aa26.56■■□□□ 1.84
SORT1-203ENST00000471996 IFNL2Q8IZJ0 200 aa26.56■■□□□ 1.84
SORT1-203ENST00000471996 ARHGEF1Q92888 912 aaKnown RBP26.55■■□□□ 1.84
SORT1-203ENST00000471996 PLEKHG2Q9H7P9 1386 aa26.55■■□□□ 1.84
SORT1-203ENST00000471996 ADRA2BP18089 450 aa26.54■■□□□ 1.84
SORT1-203ENST00000471996 KCNA3P22001 575 aa26.54■■□□□ 1.84
SORT1-203ENST00000471996 EYA1Q99502 592 aa26.54■■□□□ 1.84
SORT1-203ENST00000471996 GYS1P13807 737 aa26.53■■□□□ 1.84
SORT1-203ENST00000471996 RC3H1Q5TC82 1133 aaKnown RBP26.53■■□□□ 1.84
SORT1-203ENST00000471996 SLC4A9Q96Q91 983 aa26.53■■□□□ 1.84
SORT1-203ENST00000471996 PARP3Q9Y6F1 533 aa26.53■■□□□ 1.84
SORT1-203ENST00000471996 KDRP35968 1356 aa26.53■■□□□ 1.84
SORT1-203ENST00000471996 PPM1GO15355 546 aaPredicted RBP26.52■■□□□ 1.84
SORT1-203ENST00000471996 WASHC2AQ641Q2 1341 aa26.52■■□□□ 1.84
SORT1-203ENST00000471996 KDM2BQ8NHM5 1336 aa26.5■■□□□ 1.83
SORT1-203ENST00000471996 RFC4P35249 363 aa26.5■■□□□ 1.83
SORT1-203ENST00000471996 PIM2Q9P1W9 311 aa26.5■■□□□ 1.83
SORT1-203ENST00000471996 KIF20BQ96Q89 1820 aa26.49■■□□□ 1.83
SORT1-203ENST00000471996 C4AP0C0L4 1744 aa26.49■■□□□ 1.83
SORT1-203ENST00000471996 RPS6KA4O75676 772 aa26.49■■□□□ 1.83
SORT1-203ENST00000471996 CARD14Q9BXL6 1004 aa26.49■■□□□ 1.83
SORT1-203ENST00000471996 CNTNAP4Q9C0A0 1308 aa26.48■■□□□ 1.83
SORT1-203ENST00000471996 CAPN15O75808 1086 aa26.48■■□□□ 1.83
SORT1-203ENST00000471996 DCAF5Q96JK2 942 aa26.48■■□□□ 1.83
SORT1-203ENST00000471996 RBM42Q9BTD8 480 aaKnown RBP26.48■■□□□ 1.83
SORT1-203ENST00000471996 KCPQ6ZWJ8 1503 aa26.48■■□□□ 1.83
SORT1-203ENST00000471996 TNS4Q8IZW8 715 aa26.47■■□□□ 1.83
SORT1-203ENST00000471996 RRAGCQ9HB90 399 aa26.47■■□□□ 1.83
SORT1-203ENST00000471996 DALRD3Q5D0E6 543 aaKnown RBP26.46■■□□□ 1.83
SORT1-203ENST00000471996 RNF181Q9P0P0 153 aa26.46■■□□□ 1.83
SORT1-203ENST00000471996 BRCA1P38398 1863 aaKnown RBP26.45■■□□□ 1.83
SORT1-203ENST00000471996 ERVV-2B6SEH9 535 aa26.45■■□□□ 1.82
SORT1-203ENST00000471996 CDCA8Q53HL2 280 aa26.45■■□□□ 1.82
SORT1-203ENST00000471996 PRELPP51888 382 aa26.44■■□□□ 1.82
SORT1-203ENST00000471996 ZNF831Q5JPB2 1677 aa26.43■■□□□ 1.82
SORT1-203ENST00000471996 SMC1BQ8NDV3 1235 aa26.42■■□□□ 1.82
SORT1-203ENST00000471996 PCNTO95613 3336 aa26.41■■□□□ 1.82
SORT1-203ENST00000471996 ARFGEF1Q9Y6D6 1849 aa26.41■■□□□ 1.82
SORT1-203ENST00000471996 ANKRD26Q9UPS8 1709 aa26.4■■□□□ 1.82
SORT1-203ENST00000471996 HSP90AB1P08238 724 aaKnown RBP26.4■■□□□ 1.82
SORT1-203ENST00000471996 POLKQ9UBT6 870 aa26.4■■□□□ 1.82
SORT1-203ENST00000471996 DDR1Q08345 913 aa26.38■■□□□ 1.81
SORT1-203ENST00000471996 EIF4A2Q14240 407 aaKnown RBP26.38■■□□□ 1.81
SORT1-203ENST00000471996 FKBP8Q14318 412 aa26.38■■□□□ 1.81
SORT1-203ENST00000471996 SRP68Q9UHB9 627 aaKnown RBP26.38■■□□□ 1.81
SORT1-203ENST00000471996 COL5A3P25940 1745 aaPredicted RBP26.37■■□□□ 1.81
SORT1-203ENST00000471996 CHRNA5P30532 468 aa26.37■■□□□ 1.81
SORT1-203ENST00000471996 USP42Q9H9J4 1324 aaKnown RBP26.36■■□□□ 1.81
SORT1-203ENST00000471996 CABP4P57796 275 aa26.35■■□□□ 1.81
SORT1-203ENST00000471996 ZC3H4Q9UPT8 1303 aaKnown RBP26.35■■□□□ 1.81
SORT1-203ENST00000471996 CRKLP46109 303 aaKnown RBP26.34■■□□□ 1.81
SORT1-203ENST00000471996 TNRC6CQ9HCJ0 1690 aaKnown RBP26.34■■□□□ 1.81
SORT1-203ENST00000471996 KDM6AO15550 1401 aaPredicted RBP26.32■■□□□ 1.8
SORT1-203ENST00000471996 PTCD1O75127 700 aaKnown RBP26.32■■□□□ 1.8
SORT1-203ENST00000471996 HSPA1AP0DMV8 641 aaKnown RBP26.32■■□□□ 1.8
SORT1-203ENST00000471996 HSPA1BP0DMV9 641 aaKnown RBP26.32■■□□□ 1.8
SORT1-203ENST00000471996 PLEKHO1Q53GL0 409 aaPredicted RBP26.32■■□□□ 1.8
SORT1-203ENST00000471996 MYH14Q7Z406 1995 aaKnown RBP26.31■■□□□ 1.8
SORT1-203ENST00000471996 POLRMTO00411 1230 aaKnown RBP26.31■■□□□ 1.8
SORT1-203ENST00000471996 TM4SF1P30408 202 aa26.31■■□□□ 1.8
SORT1-203ENST00000471996 VEGFAP15692 232 aaPredicted RBP26.3■■□□□ 1.8
SORT1-203ENST00000471996 GLTPD2A6NH11 291 aa26.29■■□□□ 1.8
SORT1-203ENST00000471996 RASSF7Q02833 373 aa26.29■■□□□ 1.8
SORT1-203ENST00000471996 ZNF530Q6P9A1 599 aaPredicted RBP26.29■■□□□ 1.8
SORT1-203ENST00000471996 AMOTQ4VCS5 1084 aa26.28■■□□□ 1.8
SORT1-203ENST00000471996 LMNB1P20700 586 aa26.27■■□□□ 1.8
SORT1-203ENST00000471996 MTHFSP49914 203 aa26.27■■□□□ 1.8
SORT1-203ENST00000471996 SBF1O95248 1867 aa26.26■■□□□ 1.79
SORT1-203ENST00000471996 INTS5Q6P9B9 1019 aaKnown RBP26.26■■□□□ 1.79
SORT1-203ENST00000471996 NFATC2IPQ8NCF5 419 aa26.26■■□□□ 1.79
SORT1-203ENST00000471996 TNNT2P45379 298 aaPredicted RBP26.25■■□□□ 1.79
SORT1-203ENST00000471996 ZPR1O75312 459 aa26.24■■□□□ 1.79
SORT1-203ENST00000471996 USPL1Q5W0Q7 1092 aa26.23■■□□□ 1.79
SORT1-203ENST00000471996 C1orf141Q5JVX7 400 aa26.22■■□□□ 1.79
SORT1-203ENST00000471996 NFIXQ14938 502 aa26.19■■□□□ 1.78
SORT1-203ENST00000471996 TTLL6Q8N841 843 aa26.19■■□□□ 1.78
SORT1-203ENST00000471996 ADAMTS7Q9UKP4 1686 aa26.19■■□□□ 1.78
SORT1-203ENST00000471996 SOS1Q07889 1333 aaPredicted RBP26.18■■□□□ 1.78
SORT1-203ENST00000471996 TJP1Q07157 1748 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms