RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 IFT57Q9NWB7 429 aa8.22□□□□□ -1.09
SPEN-204ENST00000471538 CALD1Q05682 793 aaKnown RBP8.21□□□□□ -1.09
SPEN-204ENST00000471538 NHSL1Q5SYE7 1610 aa8.21□□□□□ -1.09
SPEN-204ENST00000471538 ATF7IPQ6VMQ6 1270 aa8.21□□□□□ -1.09
SPEN-204ENST00000471538 ARHGEF10O15013 1369 aa8.21□□□□□ -1.1
SPEN-204ENST00000471538 KIF16BQ96L93 1317 aa8.21□□□□□ -1.1
SPEN-204ENST00000471538 NEFMP07197 916 aa8.2□□□□□ -1.1
SPEN-204ENST00000471538 LMOD3Q0VAK6 560 aa8.2□□□□□ -1.1
SPEN-204ENST00000471538 NOB1Q9ULX3 412 aaKnown RBP8.2□□□□□ -1.1
SPEN-204ENST00000471538 SBNO1A3KN83 1393 aa8.2□□□□□ -1.1
SPEN-204ENST00000471538 KDRP35968 1356 aa8.2□□□□□ -1.1
SPEN-204ENST00000471538 NUTM2FA1L443 756 aa8.2□□□□□ -1.1
SPEN-204ENST00000471538 FAM205CA6NFA0 338 aa8.2□□□□□ -1.1
SPEN-204ENST00000471538 VAMP4O75379 141 aa8.2□□□□□ -1.1
SPEN-204ENST00000471538 GNAI1P63096 354 aa8.2□□□□□ -1.1
SPEN-204ENST00000471538 THUMPD2Q9BTF0 503 aaKnown RBP8.2□□□□□ -1.1
SPEN-204ENST00000471538 FLT4P35916 1363 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 MAP3K19Q56UN5 1328 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 RGS3P49796 1198 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 HDAC1Q13547 482 aaPredicted RBP8.19□□□□□ -1.1
SPEN-204ENST00000471538 HSP90AB2PQ58FF8 381 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 ERICH6Q7L0X2 663 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 AEBP1Q8IUX7 1158 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 FTSJ3Q8IY81 847 aaKnown RBP8.19□□□□□ -1.1
SPEN-204ENST00000471538 MRPL50Q8N5N7 158 aaKnown RBP8.19□□□□□ -1.1
SPEN-204ENST00000471538 DDX17Q92841 729 aaKnown RBP8.19□□□□□ -1.1
SPEN-204ENST00000471538 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 QTRT2Q9H974 415 aaKnown RBP8.19□□□□□ -1.1
SPEN-204ENST00000471538 MBIPQ9NS73 344 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 DDX19BQ9UMR2 479 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 LRRC37A3O60309 1634 aa8.19□□□□□ -1.1
SPEN-204ENST00000471538 MST1RQ04912 1400 aa8.18□□□□□ -1.1
SPEN-204ENST00000471538 KIF24Q5T7B8 1368 aa8.18□□□□□ -1.1
SPEN-204ENST00000471538 RBM6P78332 1123 aaKnown RBP8.18□□□□□ -1.1
SPEN-204ENST00000471538 SULT6B1Q6IMI4 303 aa8.18□□□□□ -1.1
SPEN-204ENST00000471538 CADPS2Q86UW7 1296 aa8.18□□□□□ -1.1
SPEN-204ENST00000471538 TMEM57Q8N5G2 664 aa8.18□□□□□ -1.1
SPEN-204ENST00000471538 TSPYL6Q8N831 410 aa8.18□□□□□ -1.1
SPEN-204ENST00000471538 ARHGAP45Q92619 1136 aa8.18□□□□□ -1.1
SPEN-204ENST00000471538 RWDD1Q9H446 243 aaPredicted RBP8.18□□□□□ -1.1
SPEN-204ENST00000471538 ZBTB40Q9NUA8 1239 aa8.18□□□□□ -1.1
SPEN-204ENST00000471538 DCCP43146 1447 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 CRB1P82279 1406 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 ABCC4O15439 1325 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 IGSF1Q8N6C5 1336 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 FAM83GA6ND36 823 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 IPO8O15397 1037 aaKnown RBP8.17□□□□□ -1.1
SPEN-204ENST00000471538 ATF3P18847 181 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
SPEN-204ENST00000471538 C14orf37Q86TY3 774 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 C8orf37Q96NL8 207 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 FBXO3Q9UK99 471 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 ADGRL3Q9HAR2 1447 aa8.17□□□□□ -1.1
SPEN-204ENST00000471538 PHRF1Q9P1Y6 1649 aaKnown RBP8.16□□□□□ -1.1
SPEN-204ENST00000471538 USP19O94966 1318 aa8.16□□□□□ -1.1
SPEN-204ENST00000471538 NFAT5O94916 1531 aa8.16□□□□□ -1.1
SPEN-204ENST00000471538 C8orf58Q8NAV2 365 aa8.16□□□□□ -1.1
SPEN-204ENST00000471538 NGDNQ8NEJ9 315 aaKnown RBP8.16□□□□□ -1.1
SPEN-204ENST00000471538 LAS1LQ9Y4W2 734 aaKnown RBP8.16□□□□□ -1.1
SPEN-204ENST00000471538 KIAA0232Q92628 1395 aa8.16□□□□□ -1.1
SPEN-204ENST00000471538 CHL1O00533 1208 aa8.15□□□□□ -1.1
SPEN-204ENST00000471538 DCTN1Q14203 1278 aa8.15□□□□□ -1.1
SPEN-204ENST00000471538 TWISTNBQ3B726 338 aaPredicted RBP8.15□□□□□ -1.1
SPEN-204ENST00000471538 ITPRIPQ8IWB1 547 aa8.15□□□□□ -1.1
SPEN-204ENST00000471538 SMC5Q8IY18 1101 aa8.15□□□□□ -1.1
SPEN-204ENST00000471538 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
SPEN-204ENST00000471538 L3MBTL3Q96JM7 780 aaPredicted RBP8.15□□□□□ -1.1
SPEN-204ENST00000471538 RTL1A6NKG5 1358 aa8.15□□□□□ -1.11
SPEN-204ENST00000471538 LTN1O94822 1766 aa8.14□□□□□ -1.11
SPEN-204ENST00000471538 C3orf67Q6ZVT6 689 aa8.14□□□□□ -1.11
SPEN-204ENST00000471538 KLHL34Q8N239 644 aa8.14□□□□□ -1.11
SPEN-204ENST00000471538 ZBTB7BO15156 539 aaPredicted RBP8.13□□□□□ -1.11
SPEN-204ENST00000471538 HOXC9P31274 260 aa8.13□□□□□ -1.11
SPEN-204ENST00000471538 EYA1Q99502 592 aa8.13□□□□□ -1.11
SPEN-204ENST00000471538 ATRNO75882 1429 aa8.13□□□□□ -1.11
SPEN-204ENST00000471538 ADAMTS2O95450 1211 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 GSE1Q14687 1217 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
SPEN-204ENST00000471538 MCM10Q7L590 875 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 LRRC59Q96AG4 307 aaKnown RBP8.12□□□□□ -1.11
SPEN-204ENST00000471538 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 SLIT3O75094 1523 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 TRPM3Q9HCF6 1732 aaPredicted RBP8.12□□□□□ -1.11
SPEN-204ENST00000471538 SOX12O15370 315 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 HOXB3P14651 431 aaPredicted RBP8.12□□□□□ -1.11
SPEN-204ENST00000471538 AMPHP49418 695 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 NLRP6P59044 892 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 MKRN3Q13064 507 aaKnown RBP8.12□□□□□ -1.11
SPEN-204ENST00000471538 ZNF467Q7Z7K2 595 aaPredicted RBP8.12□□□□□ -1.11
SPEN-204ENST00000471538 NGLY1Q96IV0 654 aa8.12□□□□□ -1.11
SPEN-204ENST00000471538 API5Q9BZZ5 524 aaKnown RBP8.12□□□□□ -1.11
SPEN-204ENST00000471538 FAM208AQ9UK61 1670 aaKnown RBP8.11□□□□□ -1.11
SPEN-204ENST00000471538 ELL2O00472 640 aaPredicted RBP8.11□□□□□ -1.11
SPEN-204ENST00000471538 FOXO3O43524 673 aa8.11□□□□□ -1.11
SPEN-204ENST00000471538 HTATSF1O43719 755 aaKnown RBP8.11□□□□□ -1.11
SPEN-204ENST00000471538 NUCB1Q02818 461 aa8.11□□□□□ -1.11
SPEN-204ENST00000471538 KRT24Q2M2I5 525 aa8.11□□□□□ -1.11
SPEN-204ENST00000471538 GAS2L2Q8NHY3 880 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms