RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 LGR6Q9HBX8 967 aa16.87■□□□□ 0.29
PPP1R3F-204ENST00000471261 RALBP1Q15311 655 aa16.86■□□□□ 0.29
PPP1R3F-204ENST00000471261 RNMTO43148 476 aaKnown RBP16.85■□□□□ 0.29
PPP1R3F-204ENST00000471261 GAS2L2Q8NHY3 880 aa16.85■□□□□ 0.29
PPP1R3F-204ENST00000471261 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
PPP1R3F-204ENST00000471261 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
PPP1R3F-204ENST00000471261 ITPK1Q13572 414 aa16.84■□□□□ 0.29
PPP1R3F-204ENST00000471261 LINC00116Q8NCU8 138 aa16.84■□□□□ 0.29
PPP1R3F-204ENST00000471261 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
PPP1R3F-204ENST00000471261 SLC52A2Q9HAB3 445 aa16.84■□□□□ 0.29
PPP1R3F-204ENST00000471261 C5P01031 1676 aa16.84■□□□□ 0.29
PPP1R3F-204ENST00000471261 PHF14O94880 888 aa16.83■□□□□ 0.28
PPP1R3F-204ENST00000471261 PTGER2P43116 358 aa16.83■□□□□ 0.28
PPP1R3F-204ENST00000471261 MAP3K5Q99683 1374 aa16.83■□□□□ 0.28
PPP1R3F-204ENST00000471261 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
PPP1R3F-204ENST00000471261 FCHSD2O94868 740 aa16.82■□□□□ 0.28
PPP1R3F-204ENST00000471261 COL23A1Q86Y22 540 aaPredicted RBP16.82■□□□□ 0.28
PPP1R3F-204ENST00000471261 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
PPP1R3F-204ENST00000471261 C4BP0C0L5 1744 aa16.8■□□□□ 0.28
PPP1R3F-204ENST00000471261 GNPATO15228 680 aa16.8■□□□□ 0.28
PPP1R3F-204ENST00000471261 SLC39A6Q13433 755 aa16.8■□□□□ 0.28
PPP1R3F-204ENST00000471261 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
PPP1R3F-204ENST00000471261 FLAD1Q8NFF5 587 aa16.8■□□□□ 0.28
PPP1R3F-204ENST00000471261 SLC4A9Q96Q91 983 aa16.8■□□□□ 0.28
PPP1R3F-204ENST00000471261 MYBBP1AQ9BQG0 1328 aaKnown RBP16.79■□□□□ 0.28
PPP1R3F-204ENST00000471261 NEFMP07197 916 aa16.79■□□□□ 0.28
PPP1R3F-204ENST00000471261 POLD1P28340 1107 aa16.79■□□□□ 0.28
PPP1R3F-204ENST00000471261 TEFQ10587 303 aa16.79■□□□□ 0.28
PPP1R3F-204ENST00000471261 MSL1Q68DK7 614 aa16.79■□□□□ 0.28
PPP1R3F-204ENST00000471261 TUBGCP6Q96RT7 1819 aa16.79■□□□□ 0.28
PPP1R3F-204ENST00000471261 SCN11AQ9UI33 1791 aa16.79■□□□□ 0.28
PPP1R3F-204ENST00000471261 TAF1LQ8IZX4 1826 aa16.78■□□□□ 0.28
PPP1R3F-204ENST00000471261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.78■□□□□ 0.28
PPP1R3F-204ENST00000471261 AMIGO3Q86WK7 504 aa16.78■□□□□ 0.28
PPP1R3F-204ENST00000471261 IL17REQ8NFR9 667 aa16.78■□□□□ 0.28
PPP1R3F-204ENST00000471261 ARXQ96QS3 562 aa16.78■□□□□ 0.28
PPP1R3F-204ENST00000471261 SGIP1Q9BQI5 828 aa16.78■□□□□ 0.28
PPP1R3F-204ENST00000471261 QSER1Q2KHR3 1735 aa16.77■□□□□ 0.28
PPP1R3F-204ENST00000471261 RTF1Q92541 710 aaKnown RBP16.77■□□□□ 0.28
PPP1R3F-204ENST00000471261 MRC1P22897 1456 aa16.77■□□□□ 0.28
PPP1R3F-204ENST00000471261 SSFA2P28290 1259 aa16.76■□□□□ 0.27
PPP1R3F-204ENST00000471261 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
PPP1R3F-204ENST00000471261 ZNF316A6NFI3 1004 aaPredicted RBP16.75■□□□□ 0.27
PPP1R3F-204ENST00000471261 MCM10Q7L590 875 aa16.75■□□□□ 0.27
PPP1R3F-204ENST00000471261 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
PPP1R3F-204ENST00000471261 FHDC1Q9C0D6 1143 aaPredicted RBP16.75■□□□□ 0.27
PPP1R3F-204ENST00000471261 RTCBQ9Y3I0 505 aaKnown RBP16.75■□□□□ 0.27
PPP1R3F-204ENST00000471261 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
PPP1R3F-204ENST00000471261 PRKRIP1Q9H875 184 aaPredicted RBP16.74■□□□□ 0.27
PPP1R3F-204ENST00000471261 CNTNAP4Q9C0A0 1308 aa16.73■□□□□ 0.27
PPP1R3F-204ENST00000471261 MAPK8IP3Q9UPT6 1336 aa16.73■□□□□ 0.27
PPP1R3F-204ENST00000471261 CRKLP46109 303 aaKnown RBP16.73■□□□□ 0.27
PPP1R3F-204ENST00000471261 TRAPPC3LQ5T215 181 aa16.73■□□□□ 0.27
PPP1R3F-204ENST00000471261 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
PPP1R3F-204ENST00000471261 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
PPP1R3F-204ENST00000471261 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
PPP1R3F-204ENST00000471261 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
PPP1R3F-204ENST00000471261 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
PPP1R3F-204ENST00000471261 ZNF790Q6PG37 636 aa16.72■□□□□ 0.27
PPP1R3F-204ENST00000471261 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
PPP1R3F-204ENST00000471261 CEMIPQ8WUJ3 1361 aa16.72■□□□□ 0.27
PPP1R3F-204ENST00000471261 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
PPP1R3F-204ENST00000471261 SYT17Q9BSW7 474 aa16.71■□□□□ 0.27
PPP1R3F-204ENST00000471261 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
PPP1R3F-204ENST00000471261 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
PPP1R3F-204ENST00000471261 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
PPP1R3F-204ENST00000471261 RPS6KA4O75676 772 aa16.7■□□□□ 0.26
PPP1R3F-204ENST00000471261 RFC4P35249 363 aa16.7■□□□□ 0.26
PPP1R3F-204ENST00000471261 ARHGEF1Q92888 912 aaKnown RBP16.7■□□□□ 0.26
PPP1R3F-204ENST00000471261 VIRMAQ69YN4 1812 aaKnown RBP16.7■□□□□ 0.26
PPP1R3F-204ENST00000471261 KCPQ6ZWJ8 1503 aa16.7■□□□□ 0.26
PPP1R3F-204ENST00000471261 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
PPP1R3F-204ENST00000471261 ADRA2BP18089 450 aa16.69■□□□□ 0.26
PPP1R3F-204ENST00000471261 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
PPP1R3F-204ENST00000471261 ZNF496Q96IT1 587 aaPredicted RBP16.69■□□□□ 0.26
PPP1R3F-204ENST00000471261 COL5A3P25940 1745 aaPredicted RBP16.68■□□□□ 0.26
PPP1R3F-204ENST00000471261 INTS5Q6P9B9 1019 aaKnown RBP16.68■□□□□ 0.26
PPP1R3F-204ENST00000471261 VSIG10Q8N0Z9 540 aa16.68■□□□□ 0.26
PPP1R3F-204ENST00000471261 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
PPP1R3F-204ENST00000471261 KCNQ3O43525 872 aa16.67■□□□□ 0.26
PPP1R3F-204ENST00000471261 CYP19A1P11511 503 aaPredicted RBP16.67■□□□□ 0.26
PPP1R3F-204ENST00000471261 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
PPP1R3F-204ENST00000471261 FMNL2Q96PY5 1086 aa16.67■□□□□ 0.26
PPP1R3F-204ENST00000471261 TJP1Q07157 1748 aa16.67■□□□□ 0.26
PPP1R3F-204ENST00000471261 STARD3NLO95772 234 aa16.66■□□□□ 0.26
PPP1R3F-204ENST00000471261 HEG1Q9ULI3 1381 aa16.65■□□□□ 0.26
PPP1R3F-204ENST00000471261 UTRNP46939 3433 aa16.65■□□□□ 0.26
PPP1R3F-204ENST00000471261 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
PPP1R3F-204ENST00000471261 TAF7Q15545 349 aaPredicted RBP16.65■□□□□ 0.26
PPP1R3F-204ENST00000471261 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
PPP1R3F-204ENST00000471261 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
PPP1R3F-204ENST00000471261 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
PPP1R3F-204ENST00000471261 MMP10P09238 476 aa16.64■□□□□ 0.25
PPP1R3F-204ENST00000471261 RIPK4P57078 832 aa16.64■□□□□ 0.25
PPP1R3F-204ENST00000471261 NLGN1Q8N2Q7 840 aa16.64■□□□□ 0.25
PPP1R3F-204ENST00000471261 TEX13AQ9BXU3 409 aaPredicted RBP16.64■□□□□ 0.25
PPP1R3F-204ENST00000471261 SRP68Q9UHB9 627 aaKnown RBP16.64■□□□□ 0.25
PPP1R3F-204ENST00000471261 ADAMTS8Q9UP79 889 aa16.64■□□□□ 0.25
PPP1R3F-204ENST00000471261 RRP7AQ9Y3A4 280 aaKnown RBP16.64■□□□□ 0.25
PPP1R3F-204ENST00000471261 MYH14Q7Z406 1995 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms