RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 C4BP0C0L5 1744 aa26.22■■□□□ 1.79
HDAC7-220ENST00000471235 MAPK8IP3Q9UPT6 1336 aa26.22■■□□□ 1.79
HDAC7-220ENST00000471235 NEFMP07197 916 aa26.22■■□□□ 1.79
HDAC7-220ENST00000471235 SLC27A3Q5K4L6 730 aa26.22■■□□□ 1.79
HDAC7-220ENST00000471235 SMARCC1Q92922 1105 aaPredicted RBP26.22■■□□□ 1.79
HDAC7-220ENST00000471235 PNNQ9H307 717 aaKnown RBP26.22■■□□□ 1.79
HDAC7-220ENST00000471235 ASAP1Q9ULH1 1129 aa26.22■■□□□ 1.79
HDAC7-220ENST00000471235 CEMIPQ8WUJ3 1361 aa26.21■■□□□ 1.79
HDAC7-220ENST00000471235 SLC52A2Q9HAB3 445 aa26.21■■□□□ 1.79
HDAC7-220ENST00000471235 ATG3Q9NT62 314 aa26.21■■□□□ 1.79
HDAC7-220ENST00000471235 UBR3Q6ZT12 1888 aa26.2■■□□□ 1.78
HDAC7-220ENST00000471235 KCNQ4P56696 695 aa26.2■■□□□ 1.78
HDAC7-220ENST00000471235 NFATC2IPQ8NCF5 419 aa26.2■■□□□ 1.78
HDAC7-220ENST00000471235 CCNL1Q9UK58 526 aaPredicted RBP26.2■■□□□ 1.78
HDAC7-220ENST00000471235 NBPF14Q5TI25 921 aa26.19■■□□□ 1.78
HDAC7-220ENST00000471235 IL17REQ8NFR9 667 aa26.19■■□□□ 1.78
HDAC7-220ENST00000471235 ADAMTS8Q9UP79 889 aa26.19■■□□□ 1.78
HDAC7-220ENST00000471235 KCPQ6ZWJ8 1503 aa26.19■■□□□ 1.78
HDAC7-220ENST00000471235 KDM3BQ7LBC6 1761 aa26.18■■□□□ 1.78
HDAC7-220ENST00000471235 PSDA5PKW4 1024 aaPredicted RBP26.18■■□□□ 1.78
HDAC7-220ENST00000471235 NFE2L2Q16236 605 aa26.18■■□□□ 1.78
HDAC7-220ENST00000471235 R3HDM1Q15032 1099 aaKnown RBP26.17■■□□□ 1.78
HDAC7-220ENST00000471235 CCDC146Q8IYE0 955 aa26.17■■□□□ 1.78
HDAC7-220ENST00000471235 MRS2Q9HD23 443 aa26.16■■□□□ 1.78
HDAC7-220ENST00000471235 LOC102724428A0A0B4J2F2 783 aa26.14■■□□□ 1.78
HDAC7-220ENST00000471235 SIK1P57059 783 aa26.14■■□□□ 1.78
HDAC7-220ENST00000471235 MYH14Q7Z406 1995 aaKnown RBP26.13■■□□□ 1.77
HDAC7-220ENST00000471235 HTATSF1O43719 755 aaKnown RBP26.13■■□□□ 1.77
HDAC7-220ENST00000471235 TEFQ10587 303 aa26.13■■□□□ 1.77
HDAC7-220ENST00000471235 ZNF827Q17R98 1081 aa26.13■■□□□ 1.77
HDAC7-220ENST00000471235 MCM10Q7L590 875 aa26.13■■□□□ 1.77
HDAC7-220ENST00000471235 RTF1Q92541 710 aaKnown RBP26.13■■□□□ 1.77
HDAC7-220ENST00000471235 RUNDC1Q96C34 613 aa26.13■■□□□ 1.77
HDAC7-220ENST00000471235 STK32BQ9NY57 414 aa26.13■■□□□ 1.77
HDAC7-220ENST00000471235 DCTN1Q14203 1278 aa26.12■■□□□ 1.77
HDAC7-220ENST00000471235 LRP5O75197 1615 aa26.11■■□□□ 1.77
HDAC7-220ENST00000471235 SLC15A2Q16348 729 aa26.11■■□□□ 1.77
HDAC7-220ENST00000471235 AKT1S1Q96B36 256 aa26.1■■□□□ 1.77
HDAC7-220ENST00000471235 TMPOP42166 694 aaKnown RBP26.09■■□□□ 1.77
HDAC7-220ENST00000471235 SLC39A6Q13433 755 aa26.09■■□□□ 1.77
HDAC7-220ENST00000471235 ITPK1Q13572 414 aa26.09■■□□□ 1.77
HDAC7-220ENST00000471235 PNISRQ8TF01 805 aaKnown RBP26.09■■□□□ 1.77
HDAC7-220ENST00000471235 SLC4A9Q96Q91 983 aa26.09■■□□□ 1.77
HDAC7-220ENST00000471235 RBM42Q9BTD8 480 aaKnown RBP26.09■■□□□ 1.77
HDAC7-220ENST00000471235 LAMB4A4D0S4 1761 aa26.08■■□□□ 1.77
HDAC7-220ENST00000471235 PTCD1O75127 700 aaKnown RBP26.07■■□□□ 1.76
HDAC7-220ENST00000471235 ATP6V1AP38606 617 aa26.07■■□□□ 1.76
HDAC7-220ENST00000471235 LINC00116Q8NCU8 138 aa26.07■■□□□ 1.76
HDAC7-220ENST00000471235 RRP7AQ9Y3A4 280 aaKnown RBP26.07■■□□□ 1.76
HDAC7-220ENST00000471235 C4AP0C0L4 1744 aa26.06■■□□□ 1.76
HDAC7-220ENST00000471235 COL24A1Q17RW2 1714 aa26.06■■□□□ 1.76
HDAC7-220ENST00000471235 RIPK4P57078 832 aa26.06■■□□□ 1.76
HDAC7-220ENST00000471235 THUMPD2Q9BTF0 503 aaKnown RBP26.05■■□□□ 1.76
HDAC7-220ENST00000471235 LMOD3Q0VAK6 560 aa26.02■■□□□ 1.76
HDAC7-220ENST00000471235 ZNF790Q6PG37 636 aa26.02■■□□□ 1.76
HDAC7-220ENST00000471235 TTC5Q8N0Z6 440 aa26.02■■□□□ 1.76
HDAC7-220ENST00000471235 PDGFDQ9GZP0 370 aaPredicted RBP26.02■■□□□ 1.76
HDAC7-220ENST00000471235 BTBD11A6QL63 1104 aa26.01■■□□□ 1.75
HDAC7-220ENST00000471235 HMGB2P26583 209 aaKnown RBP26.01■■□□□ 1.75
HDAC7-220ENST00000471235 NEUROD2Q15784 382 aa26.01■■□□□ 1.75
HDAC7-220ENST00000471235 DIEXFQ68CQ4 756 aaKnown RBP26.01■■□□□ 1.75
HDAC7-220ENST00000471235 PNPLA7Q6ZV29 1317 aa26.01■■□□□ 1.75
HDAC7-220ENST00000471235 TFCP2L1Q9NZI6 479 aa26■■□□□ 1.75
HDAC7-220ENST00000471235 APAF1O14727 1248 aa25.99■■□□□ 1.75
HDAC7-220ENST00000471235 KCNQ3O43525 872 aa25.99■■□□□ 1.75
HDAC7-220ENST00000471235 AK7Q96M32 723 aa25.99■■□□□ 1.75
HDAC7-220ENST00000471235 TRIM35Q9UPQ4 493 aa25.99■■□□□ 1.75
HDAC7-220ENST00000471235 HEG1Q9ULI3 1381 aa25.98■■□□□ 1.75
HDAC7-220ENST00000471235 CNTNAP4Q9C0A0 1308 aa25.98■■□□□ 1.75
HDAC7-220ENST00000471235 TAF7Q15545 349 aaPredicted RBP25.98■■□□□ 1.75
HDAC7-220ENST00000471235 ZNF496Q96IT1 587 aaPredicted RBP25.98■■□□□ 1.75
HDAC7-220ENST00000471235 DNAJC10Q8IXB1 793 aa25.97■■□□□ 1.75
HDAC7-220ENST00000471235 AMIGO3Q86WK7 504 aa25.96■■□□□ 1.75
HDAC7-220ENST00000471235 VSIG10Q8N0Z9 540 aa25.96■■□□□ 1.75
HDAC7-220ENST00000471235 GNPATO15228 680 aa25.94■■□□□ 1.74
HDAC7-220ENST00000471235 FAM9BQ8IZU0 186 aa25.94■■□□□ 1.74
HDAC7-220ENST00000471235 FMNL2Q96PY5 1086 aa25.94■■□□□ 1.74
HDAC7-220ENST00000471235 MIS18AQ9NYP9 233 aa25.94■■□□□ 1.74
HDAC7-220ENST00000471235 CCER2I3L3R5 266 aa25.93■■□□□ 1.74
HDAC7-220ENST00000471235 RC3H1Q5TC82 1133 aaKnown RBP25.93■■□□□ 1.74
HDAC7-220ENST00000471235 CRKLP46109 303 aaKnown RBP25.92■■□□□ 1.74
HDAC7-220ENST00000471235 PHF14O94880 888 aa25.91■■□□□ 1.74
HDAC7-220ENST00000471235 SMIM5Q71RC9 77 aa25.91■■□□□ 1.74
HDAC7-220ENST00000471235 COL23A1Q86Y22 540 aaPredicted RBP25.91■■□□□ 1.74
HDAC7-220ENST00000471235 ZBTB7AO95365 584 aa25.9■■□□□ 1.74
HDAC7-220ENST00000471235 CYP19A1P11511 503 aaPredicted RBP25.9■■□□□ 1.74
HDAC7-220ENST00000471235 SSFA2P28290 1259 aa25.9■■□□□ 1.74
HDAC7-220ENST00000471235 SENP3-EIF4A1A0A087X0R7 540 aa25.89■■□□□ 1.74
HDAC7-220ENST00000471235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.89■■□□□ 1.74
HDAC7-220ENST00000471235 SCN7AQ01118 1682 aa25.88■■□□□ 1.73
HDAC7-220ENST00000471235 INTS5Q6P9B9 1019 aaKnown RBP25.88■■□□□ 1.73
HDAC7-220ENST00000471235 FLAD1Q8NFF5 587 aa25.88■■□□□ 1.73
HDAC7-220ENST00000471235 CCDC87Q9NVE4 849 aa25.88■■□□□ 1.73
HDAC7-220ENST00000471235 TSPYL4Q9UJ04 414 aa25.88■■□□□ 1.73
HDAC7-220ENST00000471235 BCORQ6W2J9 1755 aa25.87■■□□□ 1.73
HDAC7-220ENST00000471235 MTFR1LQ9H019 292 aa25.87■■□□□ 1.73
HDAC7-220ENST00000471235 RTCBQ9Y3I0 505 aaKnown RBP25.87■■□□□ 1.73
HDAC7-220ENST00000471235 MSH5O43196 834 aa25.86■■□□□ 1.73
HDAC7-220ENST00000471235 RPS6KA4O75676 772 aa25.86■■□□□ 1.73
HDAC7-220ENST00000471235 MIER1Q8N108 512 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms