RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
ABCF3-208ENST00000471226 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
ABCF3-208ENST00000471226 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
ABCF3-208ENST00000471226 GNAT3A8MTJ3 354 aa20.21■□□□□ 0.83
ABCF3-208ENST00000471226 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
ABCF3-208ENST00000471226 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
ABCF3-208ENST00000471226 ZNF827Q17R98 1081 aa20.2■□□□□ 0.82
ABCF3-208ENST00000471226 PLEKHF1Q96S99 279 aa20.2■□□□□ 0.82
ABCF3-208ENST00000471226 LRP5O75197 1615 aa20.18■□□□□ 0.82
ABCF3-208ENST00000471226 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
ABCF3-208ENST00000471226 HMGB2P26583 209 aaKnown RBP20.18■□□□□ 0.82
ABCF3-208ENST00000471226 SIK1P57059 783 aa20.18■□□□□ 0.82
ABCF3-208ENST00000471226 IL17REQ8NFR9 667 aa20.18■□□□□ 0.82
ABCF3-208ENST00000471226 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
ABCF3-208ENST00000471226 C4BP0C0L5 1744 aa20.17■□□□□ 0.82
ABCF3-208ENST00000471226 CEMIPQ8WUJ3 1361 aa20.16■□□□□ 0.82
ABCF3-208ENST00000471226 COL5A3P25940 1745 aaPredicted RBP20.16■□□□□ 0.82
ABCF3-208ENST00000471226 SLC4A9Q96Q91 983 aa20.15■□□□□ 0.82
ABCF3-208ENST00000471226 PDGFDQ9GZP0 370 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-208ENST00000471226 CICQ96RK0 1608 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-208ENST00000471226 UBR2Q8IWV8 1755 aa20.15■□□□□ 0.82
ABCF3-208ENST00000471226 UBR3Q6ZT12 1888 aa20.14■□□□□ 0.81
ABCF3-208ENST00000471226 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
ABCF3-208ENST00000471226 NEFMP07197 916 aa20.14■□□□□ 0.81
ABCF3-208ENST00000471226 ITPK1Q13572 414 aa20.14■□□□□ 0.81
ABCF3-208ENST00000471226 ANP32CO43423 234 aa20.13■□□□□ 0.81
ABCF3-208ENST00000471226 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
ABCF3-208ENST00000471226 TEFQ10587 303 aa20.12■□□□□ 0.81
ABCF3-208ENST00000471226 LINC00116Q8NCU8 138 aa20.12■□□□□ 0.81
ABCF3-208ENST00000471226 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
ABCF3-208ENST00000471226 TJP1Q07157 1748 aa20.12■□□□□ 0.81
ABCF3-208ENST00000471226 MYH14Q7Z406 1995 aaKnown RBP20.12■□□□□ 0.81
ABCF3-208ENST00000471226 PNPLA7Q6ZV29 1317 aa20.11■□□□□ 0.81
ABCF3-208ENST00000471226 MAPK8IP3Q9UPT6 1336 aa20.11■□□□□ 0.81
ABCF3-208ENST00000471226 WDR43Q15061 677 aaKnown RBP eCLIP20.11■□□□□ 0.81
ABCF3-208ENST00000471226 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
ABCF3-208ENST00000471226 TFCP2L1Q9NZI6 479 aa20.11■□□□□ 0.81
ABCF3-208ENST00000471226 ADAMTS8Q9UP79 889 aa20.11■□□□□ 0.81
ABCF3-208ENST00000471226 SRCAPQ6ZRS2 3230 aa20.11■□□□□ 0.81
ABCF3-208ENST00000471226 KCPQ6ZWJ8 1503 aa20.11■□□□□ 0.81
ABCF3-208ENST00000471226 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
ABCF3-208ENST00000471226 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
ABCF3-208ENST00000471226 CCDC184Q52MB2 194 aa20.1■□□□□ 0.81
ABCF3-208ENST00000471226 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
ABCF3-208ENST00000471226 MCM10Q7L590 875 aa20.09■□□□□ 0.81
ABCF3-208ENST00000471226 COL24A1Q17RW2 1714 aa20.09■□□□□ 0.81
ABCF3-208ENST00000471226 DCTN1Q14203 1278 aa20.08■□□□□ 0.81
ABCF3-208ENST00000471226 RUNDC1Q96C34 613 aa20.07■□□□□ 0.8
ABCF3-208ENST00000471226 SPON1Q9HCB6 807 aa20.07■□□□□ 0.8
ABCF3-208ENST00000471226 RC3H1Q5TC82 1133 aaKnown RBP20.06■□□□□ 0.8
ABCF3-208ENST00000471226 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
ABCF3-208ENST00000471226 SLC16A10Q8TF71 515 aa20.06■□□□□ 0.8
ABCF3-208ENST00000471226 AK7Q96M32 723 aa20.06■□□□□ 0.8
ABCF3-208ENST00000471226 ZBTB7AO95365 584 aa20.05■□□□□ 0.8
ABCF3-208ENST00000471226 TMPOP42166 694 aaKnown RBP20.05■□□□□ 0.8
ABCF3-208ENST00000471226 AMIGO3Q86WK7 504 aa20.05■□□□□ 0.8
ABCF3-208ENST00000471226 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
ABCF3-208ENST00000471226 CCDC146Q8IYE0 955 aa20.05■□□□□ 0.8
ABCF3-208ENST00000471226 FLAD1Q8NFF5 587 aa20.05■□□□□ 0.8
ABCF3-208ENST00000471226 MTFR1LQ9H019 292 aa20.05■□□□□ 0.8
ABCF3-208ENST00000471226 CNTNAP4Q9C0A0 1308 aa20.04■□□□□ 0.8
ABCF3-208ENST00000471226 BTBD11A6QL63 1104 aa20.04■□□□□ 0.8
ABCF3-208ENST00000471226 TTC5Q8N0Z6 440 aa20.04■□□□□ 0.8
ABCF3-208ENST00000471226 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
ABCF3-208ENST00000471226 RIPK4P57078 832 aa20.03■□□□□ 0.8
ABCF3-208ENST00000471226 ATF5Q9Y2D1 282 aaPredicted RBP20.03■□□□□ 0.8
ABCF3-208ENST00000471226 KDM3BQ7LBC6 1761 aa20.03■□□□□ 0.8
ABCF3-208ENST00000471226 SSFA2P28290 1259 aa20.02■□□□□ 0.8
ABCF3-208ENST00000471226 PTGER2P43116 358 aa20.02■□□□□ 0.8
ABCF3-208ENST00000471226 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
ABCF3-208ENST00000471226 DNAJC10Q8IXB1 793 aa20.02■□□□□ 0.8
ABCF3-208ENST00000471226 ZNF496Q96IT1 587 aaPredicted RBP20.02■□□□□ 0.8
ABCF3-208ENST00000471226 SGIP1Q9BQI5 828 aa20.02■□□□□ 0.8
ABCF3-208ENST00000471226 HEG1Q9ULI3 1381 aa20.01■□□□□ 0.79
ABCF3-208ENST00000471226 GNPATO15228 680 aa20.01■□□□□ 0.79
ABCF3-208ENST00000471226 KCNQ3O43525 872 aa20.01■□□□□ 0.79
ABCF3-208ENST00000471226 PNISRQ8TF01 805 aaKnown RBP20.01■□□□□ 0.79
ABCF3-208ENST00000471226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20■□□□□ 0.79
ABCF3-208ENST00000471226 RPS6KA4O75676 772 aa20■□□□□ 0.79
ABCF3-208ENST00000471226 CRKLP46109 303 aaKnown RBP20■□□□□ 0.79
ABCF3-208ENST00000471226 SMIM5Q71RC9 77 aa20■□□□□ 0.79
ABCF3-208ENST00000471226 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
ABCF3-208ENST00000471226 MRS2Q9HD23 443 aa20■□□□□ 0.79
ABCF3-208ENST00000471226 CYP19A1P11511 503 aaPredicted RBP19.99■□□□□ 0.79
ABCF3-208ENST00000471226 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
ABCF3-208ENST00000471226 RRP7AQ9Y3A4 280 aaKnown RBP19.99■□□□□ 0.79
ABCF3-208ENST00000471226 RTCBQ9Y3I0 505 aaKnown RBP19.99■□□□□ 0.79
ABCF3-208ENST00000471226 C4AP0C0L4 1744 aa19.99■□□□□ 0.79
ABCF3-208ENST00000471226 MSH5O43196 834 aa19.98■□□□□ 0.79
ABCF3-208ENST00000471226 PHF14O94880 888 aa19.98■□□□□ 0.79
ABCF3-208ENST00000471226 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
ABCF3-208ENST00000471226 INTS5Q6P9B9 1019 aaKnown RBP19.98■□□□□ 0.79
ABCF3-208ENST00000471226 NEUROD2Q15784 382 aa19.97■□□□□ 0.79
ABCF3-208ENST00000471226 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
ABCF3-208ENST00000471226 TRIM35Q9UPQ4 493 aa19.97■□□□□ 0.79
ABCF3-208ENST00000471226 ADRA2BP18089 450 aa19.96■□□□□ 0.79
ABCF3-208ENST00000471226 TRAPPC3LQ5T215 181 aa19.96■□□□□ 0.79
ABCF3-208ENST00000471226 CCDC87Q9NVE4 849 aa19.96■□□□□ 0.79
ABCF3-208ENST00000471226 MIS18AQ9NYP9 233 aa19.96■□□□□ 0.79
ABCF3-208ENST00000471226 APAF1O14727 1248 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms