RNA–Protein interactions for RNA: ENST00000471145.1

NPHP3-205, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-205ENST00000471145 TAS1R3Q7RTX0 852 aa8.53□□□□□ -1.04
NPHP3-205ENST00000471145 FHDC1Q9C0D6 1143 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-205ENST00000471145 ETNK1Q9HBU6 452 aa8.53□□□□□ -1.04
NPHP3-205ENST00000471145 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-205ENST00000471145 INHAP05111 366 aa8.52□□□□□ -1.05
NPHP3-205ENST00000471145 ZSCAN1Q8NBB4 408 aa8.52□□□□□ -1.05
NPHP3-205ENST00000471145 NOD1Q9Y239 953 aa8.52□□□□□ -1.05
NPHP3-205ENST00000471145 CDC14CA4D256 554 aa8.51□□□□□ -1.05
NPHP3-205ENST00000471145 SCNN1DP51172 638 aa8.51□□□□□ -1.05
NPHP3-205ENST00000471145 GDF10P55107 478 aa8.51□□□□□ -1.05
NPHP3-205ENST00000471145 GNASQ5JWF2 1037 aa8.51□□□□□ -1.05
NPHP3-205ENST00000471145 TMEM214Q6NUQ4 689 aaKnown RBP8.51□□□□□ -1.05
NPHP3-205ENST00000471145 TIMMDC1Q9NPL8 285 aa8.51□□□□□ -1.05
NPHP3-205ENST00000471145 PCDHGA11Q9Y5H2 935 aa8.51□□□□□ -1.05
NPHP3-205ENST00000471145 H7C1W4 665 aa8.5□□□□□ -1.05
NPHP3-205ENST00000471145 LORP23490 312 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-205ENST00000471145 PPARGC1BQ86YN6 1023 aaKnown RBP8.5□□□□□ -1.05
NPHP3-205ENST00000471145 TRIM22Q8IYM9 498 aa8.5□□□□□ -1.05
NPHP3-205ENST00000471145 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
NPHP3-205ENST00000471145 USP17L5A8MUK1 530 aa8.49□□□□□ -1.05
NPHP3-205ENST00000471145 F11P03951 625 aa8.49□□□□□ -1.05
NPHP3-205ENST00000471145 RFX1P22670 979 aa8.49□□□□□ -1.05
NPHP3-205ENST00000471145 NCOA4Q13772 614 aa8.49□□□□□ -1.05
NPHP3-205ENST00000471145 PLEKHM2Q8IWE5 1019 aa8.49□□□□□ -1.05
NPHP3-205ENST00000471145 SLC4A9Q96Q91 983 aa8.49□□□□□ -1.05
NPHP3-205ENST00000471145 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
NPHP3-205ENST00000471145 CUEDC1Q9NWM3 386 aaPredicted RBP8.49□□□□□ -1.05
NPHP3-205ENST00000471145 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
NPHP3-205ENST00000471145 TLR1Q15399 786 aa8.48□□□□□ -1.05
NPHP3-205ENST00000471145 FOXR1Q6PIV2 292 aa8.48□□□□□ -1.05
NPHP3-205ENST00000471145 RIPOR1Q6ZS17 1223 aa8.48□□□□□ -1.05
NPHP3-205ENST00000471145 RHBDD1Q8TEB9 315 aa8.48□□□□□ -1.05
NPHP3-205ENST00000471145 CNTNAP3BQ96NU0 1288 aa8.48□□□□□ -1.05
NPHP3-205ENST00000471145 GAS2L1Q99501 681 aaPredicted RBP8.48□□□□□ -1.05
NPHP3-205ENST00000471145 CNTNAP3Q9BZ76 1288 aa8.48□□□□□ -1.05
NPHP3-205ENST00000471145 A0A1B0GTH6 734 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 ATP9BO43861 1147 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 SMTNP53814 917 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 GTF2IP78347 998 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 KRT76Q01546 638 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 TRIM26Q12899 539 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-205ENST00000471145 DBN1Q16643 649 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 TBC1D9Q6ZT07 1266 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 UCN2Q96RP3 112 aa8.47□□□□□ -1.05
NPHP3-205ENST00000471145 TMEM229AB2RXF0 380 aa8.46□□□□□ -1.06
NPHP3-205ENST00000471145 BACH1O14867 736 aa8.46□□□□□ -1.06
NPHP3-205ENST00000471145 C4orf17Q53FE4 359 aa8.46□□□□□ -1.06
NPHP3-205ENST00000471145 DEPDC4Q8N2C3 294 aa8.46□□□□□ -1.06
NPHP3-205ENST00000471145 ZNF837Q96EG3 531 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-205ENST00000471145 CDK2AP1O14519 115 aa8.45□□□□□ -1.06
NPHP3-205ENST00000471145 PDIA4P13667 645 aaKnown RBP8.45□□□□□ -1.06
NPHP3-205ENST00000471145 PHKA2P46019 1235 aa8.45□□□□□ -1.06
NPHP3-205ENST00000471145 RNFT1Q5M7Z0 435 aa8.45□□□□□ -1.06
NPHP3-205ENST00000471145 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-205ENST00000471145 USP17L3A6NCW0 530 aa8.44□□□□□ -1.06
NPHP3-205ENST00000471145 USP17L4A6NCW7 530 aa8.44□□□□□ -1.06
NPHP3-205ENST00000471145 ATP1A2P50993 1020 aa8.44□□□□□ -1.06
NPHP3-205ENST00000471145 MTFR1Q15390 333 aa8.44□□□□□ -1.06
NPHP3-205ENST00000471145 USP17L2Q6R6M4 530 aa8.44□□□□□ -1.06
NPHP3-205ENST00000471145 USP17L1Q7RTZ2 530 aa8.44□□□□□ -1.06
NPHP3-205ENST00000471145 RETREG2Q8NC44 543 aa8.44□□□□□ -1.06
NPHP3-205ENST00000471145 NIFKQ9BYG3 293 aaKnown RBP8.44□□□□□ -1.06
NPHP3-205ENST00000471145 SERTAD1Q9UHV2 236 aa8.44□□□□□ -1.06
NPHP3-205ENST00000471145 A6NJY4 79 aa8.43□□□□□ -1.06
NPHP3-205ENST00000471145 PSME1Q06323 249 aa8.43□□□□□ -1.06
NPHP3-205ENST00000471145 LBRQ14739 615 aaKnown RBP8.43□□□□□ -1.06
NPHP3-205ENST00000471145 CFAP70Q5T0N1 1121 aa8.43□□□□□ -1.06
NPHP3-205ENST00000471145 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
NPHP3-205ENST00000471145 NUCKS1Q9H1E3 243 aaKnown RBP8.43□□□□□ -1.06
NPHP3-205ENST00000471145 ZBTB7BO15156 539 aaPredicted RBP8.42□□□□□ -1.06
NPHP3-205ENST00000471145 SLURP2P0DP57 97 aa8.42□□□□□ -1.06
NPHP3-205ENST00000471145 MSX1P28360 303 aa8.42□□□□□ -1.06
NPHP3-205ENST00000471145 GTPBP3Q969Y2 492 aaKnown RBP8.42□□□□□ -1.06
NPHP3-205ENST00000471145 TRERF1Q96PN7 1200 aa8.42□□□□□ -1.06
NPHP3-205ENST00000471145 TFIP11Q9UBB9 837 aaKnown RBP8.42□□□□□ -1.06
NPHP3-205ENST00000471145 PALM3A6NDB9 673 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-205ENST00000471145 CSB-PGBD3P0DP91 1061 aa8.41□□□□□ -1.06
NPHP3-205ENST00000471145 LMOD1P29536 600 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-205ENST00000471145 SRSF11Q05519 484 aaKnown RBP8.41□□□□□ -1.06
NPHP3-205ENST00000471145 GAS6Q14393 721 aa8.41□□□□□ -1.06
NPHP3-205ENST00000471145 CDCA8Q53HL2 280 aa8.41□□□□□ -1.06
NPHP3-205ENST00000471145 PGBD3Q8N328 593 aa8.41□□□□□ -1.06
NPHP3-205ENST00000471145 LARGE2Q8N3Y3 721 aa8.41□□□□□ -1.06
NPHP3-205ENST00000471145 C1orf216Q8TAB5 229 aa8.41□□□□□ -1.06
NPHP3-205ENST00000471145 ZNF358Q9NW07 568 aa8.41□□□□□ -1.06
NPHP3-205ENST00000471145 PODXL2Q9NZ53 605 aa8.41□□□□□ -1.06
NPHP3-205ENST00000471145 MKRN1Q9UHC7 482 aaKnown RBP8.41□□□□□ -1.06
NPHP3-205ENST00000471145 ZNF295-AS1Q8N0V1 137 aa8.4□□□□□ -1.06
NPHP3-205ENST00000471145 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
NPHP3-205ENST00000471145 CFHR5Q9BXR6 569 aa8.4□□□□□ -1.06
NPHP3-205ENST00000471145 GPAMQ9HCL2 828 aa8.4□□□□□ -1.06
NPHP3-205ENST00000471145 DNAAF2Q9NVR5 837 aaKnown RBP8.4□□□□□ -1.06
NPHP3-205ENST00000471145 SCHIP1Q9P0W5 487 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-205ENST00000471145 IQSEC3Q9UPP2 1182 aaPredicted RBP8.4□□□□□ -1.06
NPHP3-205ENST00000471145 PLA2G4AP47712 749 aa8.39□□□□□ -1.07
NPHP3-205ENST00000471145 CLDN10P78369 228 aa8.39□□□□□ -1.07
NPHP3-205ENST00000471145 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
NPHP3-205ENST00000471145 CCDC102BQ68D86 513 aa8.39□□□□□ -1.07
NPHP3-205ENST00000471145 OGFOD1Q8N543 542 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms