RNA–Protein interactions for RNA: ENST00000471134.1

TRA2B-210, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-210ENST00000471134 ABL2P42684 1182 aa11.35□□□□□ -0.59
TRA2B-210ENST00000471134 C4orf17Q53FE4 359 aa11.35□□□□□ -0.59
TRA2B-210ENST00000471134 OXLD1Q5BKU9 147 aa11.35□□□□□ -0.59
TRA2B-210ENST00000471134 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
TRA2B-210ENST00000471134 PRM3Q9NNZ6 103 aa11.35□□□□□ -0.59
TRA2B-210ENST00000471134 UBAP2LQ14157 1087 aaKnown RBP11.34□□□□□ -0.59
TRA2B-210ENST00000471134 USP4Q13107 963 aa11.33□□□□□ -0.6
TRA2B-210ENST00000471134 MCM6Q14566 821 aa11.33□□□□□ -0.6
TRA2B-210ENST00000471134 A0A1B0GTH6 734 aa11.32□□□□□ -0.6
TRA2B-210ENST00000471134 MX2P20592 715 aa11.32□□□□□ -0.6
TRA2B-210ENST00000471134 SCNN1DP51172 638 aa11.32□□□□□ -0.6
TRA2B-210ENST00000471134 ESCO1Q5FWF5 840 aa11.32□□□□□ -0.6
TRA2B-210ENST00000471134 TMEM214Q6NUQ4 689 aaKnown RBP11.32□□□□□ -0.6
TRA2B-210ENST00000471134 BCRP11274 1271 aa11.31□□□□□ -0.6
TRA2B-210ENST00000471134 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
TRA2B-210ENST00000471134 SCARF2Q96GP6 870 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-210ENST00000471134 RUBCNLQ9H714 662 aa11.3□□□□□ -0.6
TRA2B-210ENST00000471134 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-210ENST00000471134 MSX1P28360 303 aa11.29□□□□□ -0.6
TRA2B-210ENST00000471134 TLR1Q15399 786 aa11.29□□□□□ -0.6
TRA2B-210ENST00000471134 KANK3Q6NY19 840 aa11.29□□□□□ -0.6
TRA2B-210ENST00000471134 RHBDD1Q8TEB9 315 aa11.29□□□□□ -0.6
TRA2B-210ENST00000471134 DNMT3AQ9Y6K1 912 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-210ENST00000471134 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
TRA2B-210ENST00000471134 PPARGC1BQ86YN6 1023 aaKnown RBP11.28□□□□□ -0.6
TRA2B-210ENST00000471134 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
TRA2B-210ENST00000471134 CFHR5Q9BXR6 569 aa11.28□□□□□ -0.6
TRA2B-210ENST00000471134 ENAMQ9NRM1 1142 aa11.28□□□□□ -0.6
TRA2B-210ENST00000471134 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
TRA2B-210ENST00000471134 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
TRA2B-210ENST00000471134 INHAP05111 366 aa11.26□□□□□ -0.61
TRA2B-210ENST00000471134 GDF10P55107 478 aa11.26□□□□□ -0.61
TRA2B-210ENST00000471134 GTF2E1P29083 439 aaPredicted RBP11.25□□□□□ -0.61
TRA2B-210ENST00000471134 SUZ12Q15022 739 aaKnown RBP11.25□□□□□ -0.61
TRA2B-210ENST00000471134 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
TRA2B-210ENST00000471134 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
TRA2B-210ENST00000471134 LOC100996750A0A140TA64 210 aa11.24□□□□□ -0.61
TRA2B-210ENST00000471134 OIP5O43482 229 aa11.24□□□□□ -0.61
TRA2B-210ENST00000471134 PLA2G4AP47712 749 aa11.24□□□□□ -0.61
TRA2B-210ENST00000471134 LBRQ14739 615 aaKnown RBP11.24□□□□□ -0.61
TRA2B-210ENST00000471134 MAP7D1Q3KQU3 841 aa11.24□□□□□ -0.61
TRA2B-210ENST00000471134 GPAT2Q6NUI2 795 aa11.24□□□□□ -0.61
TRA2B-210ENST00000471134 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-210ENST00000471134 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
TRA2B-210ENST00000471134 OXCT2Q9BYC2 517 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-210ENST00000471134 KRTAP4-6Q9BYQ5 205 aa11.24□□□□□ -0.61
TRA2B-210ENST00000471134 MAP2K3P46734 347 aa11.23□□□□□ -0.61
TRA2B-210ENST00000471134 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
TRA2B-210ENST00000471134 KLRG1Q96E93 195 aa11.23□□□□□ -0.61
TRA2B-210ENST00000471134 LRRC4BQ9NT99 713 aa11.23□□□□□ -0.61
TRA2B-210ENST00000471134 NDFIP2Q9NV92 336 aa11.23□□□□□ -0.61
TRA2B-210ENST00000471134 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
TRA2B-210ENST00000471134 TMEM229AB2RXF0 380 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 SHISA8B8ZZ34 492 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 ATP4AP20648 1035 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 ZNF295-AS1Q8N0V1 137 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 PGBD3Q8N328 593 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 ABHD17AQ96GS6 310 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 CRISPLD1Q9H336 500 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 USP3Q9Y6I4 520 aa11.22□□□□□ -0.61
TRA2B-210ENST00000471134 C2CD2LO14523 706 aa11.21□□□□□ -0.61
TRA2B-210ENST00000471134 DNAAF2Q9NVR5 837 aaKnown RBP11.21□□□□□ -0.61
TRA2B-210ENST00000471134 PHF24Q9UPV7 400 aa11.21□□□□□ -0.61
TRA2B-210ENST00000471134 BNIP3LO60238 219 aa11.2□□□□□ -0.62
TRA2B-210ENST00000471134 ITGB2P05107 769 aa11.2□□□□□ -0.62
TRA2B-210ENST00000471134 SOX11P35716 441 aa11.2□□□□□ -0.62
TRA2B-210ENST00000471134 SMTNP53814 917 aa11.2□□□□□ -0.62
TRA2B-210ENST00000471134 EFHC2Q5JST6 749 aa11.2□□□□□ -0.62
TRA2B-210ENST00000471134 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
TRA2B-210ENST00000471134 SERTAD1Q9UHV2 236 aa11.2□□□□□ -0.62
TRA2B-210ENST00000471134 ATXN7L1Q9ULK2 861 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-210ENST00000471134 SNRPNP63162 240 aaKnown RBP11.19□□□□□ -0.62
TRA2B-210ENST00000471134 TBC1D9Q6ZT07 1266 aa11.19□□□□□ -0.62
TRA2B-210ENST00000471134 DCAF5Q96JK2 942 aa11.19□□□□□ -0.62
TRA2B-210ENST00000471134 HCN2Q9UL51 889 aa11.19□□□□□ -0.62
TRA2B-210ENST00000471134 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
TRA2B-210ENST00000471134 PCDHGA11Q9Y5H2 935 aa11.19□□□□□ -0.62
TRA2B-210ENST00000471134 PHF20L1A8MW92 1017 aa11.18□□□□□ -0.62
TRA2B-210ENST00000471134 CTBSQ01459 385 aa11.18□□□□□ -0.62
TRA2B-210ENST00000471134 BEND7Q8N7W2 519 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-210ENST00000471134 FGFR3P22607 806 aa11.17□□□□□ -0.62
TRA2B-210ENST00000471134 PODNQ7Z5L7 613 aa11.17□□□□□ -0.62
TRA2B-210ENST00000471134 ALG2Q9H553 416 aa11.17□□□□□ -0.62
TRA2B-210ENST00000471134 MTFR1Q15390 333 aa11.16□□□□□ -0.62
TRA2B-210ENST00000471134 PLA2G4EQ3MJ16 856 aa11.16□□□□□ -0.62
TRA2B-210ENST00000471134 GALNT6Q8NCL4 622 aa11.16□□□□□ -0.62
TRA2B-210ENST00000471134 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
TRA2B-210ENST00000471134 NIFKQ9BYG3 293 aaKnown RBP11.16□□□□□ -0.62
TRA2B-210ENST00000471134 BMP4P12644 408 aa11.15□□□□□ -0.62
TRA2B-210ENST00000471134 FOXK2Q01167 660 aa11.15□□□□□ -0.62
TRA2B-210ENST00000471134 ZCCHC2Q9C0B9 1178 aaKnown RBP11.15□□□□□ -0.62
TRA2B-210ENST00000471134 IGHA1P01876 353 aa11.14□□□□□ -0.63
TRA2B-210ENST00000471134 SKIP12755 728 aa11.14□□□□□ -0.63
TRA2B-210ENST00000471134 EDARADDQ8WWZ3 215 aa11.14□□□□□ -0.63
TRA2B-210ENST00000471134 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
TRA2B-210ENST00000471134 GDF2Q9UK05 429 aaPredicted RBP11.14□□□□□ -0.63
TRA2B-210ENST00000471134 A6NJY4 79 aa11.13□□□□□ -0.63
TRA2B-210ENST00000471134 HOXB4P17483 251 aaPredicted RBP11.13□□□□□ -0.63
TRA2B-210ENST00000471134 C1orf216Q8TAB5 229 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms