RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 LAPTM4BQ86VI4 370 aa7.63□□□□□ -1.19
HDAC8-216ENST00000470998 ANKK1Q8NFD2 765 aa7.63□□□□□ -1.19
HDAC8-216ENST00000470998 NPDC1Q9NQX5 325 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-216ENST00000470998 COL22A1Q8NFW1 1626 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-216ENST00000470998 PARD3Q8TEW0 1356 aa7.62□□□□□ -1.19
HDAC8-216ENST00000470998 GNPATO15228 680 aa7.62□□□□□ -1.19
HDAC8-216ENST00000470998 FAM98CQ17RN3 349 aaKnown RBP7.62□□□□□ -1.19
HDAC8-216ENST00000470998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.62□□□□□ -1.19
HDAC8-216ENST00000470998 NLRP13Q86W25 1043 aa7.62□□□□□ -1.19
HDAC8-216ENST00000470998 WNT2BQ93097 391 aa7.62□□□□□ -1.19
HDAC8-216ENST00000470998 KCTD12Q96CX2 325 aaKnown RBP7.62□□□□□ -1.19
HDAC8-216ENST00000470998 TESK2Q96S53 571 aa7.62□□□□□ -1.19
HDAC8-216ENST00000470998 KIF1AQ12756 1690 aa7.62□□□□□ -1.19
HDAC8-216ENST00000470998 ADGRB1O14514 1584 aa7.62□□□□□ -1.19
HDAC8-216ENST00000470998 ATRNO75882 1429 aa7.61□□□□□ -1.19
HDAC8-216ENST00000470998 ARHGEF10O15013 1369 aa7.61□□□□□ -1.19
HDAC8-216ENST00000470998 BHMG1C9JSJ3 638 aaPredicted RBP7.61□□□□□ -1.19
HDAC8-216ENST00000470998 SLC4A3P48751 1232 aa7.61□□□□□ -1.19
HDAC8-216ENST00000470998 HNRNPUQ00839 825 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDAC8-216ENST00000470998 NUDT18Q6ZVK8 323 aa7.61□□□□□ -1.19
HDAC8-216ENST00000470998 TATDN2Q93075 761 aa7.61□□□□□ -1.19
HDAC8-216ENST00000470998 TRAK1Q9UPV9 953 aa7.61□□□□□ -1.19
HDAC8-216ENST00000470998 SUPT16HQ9Y5B9 1047 aaKnown RBP7.61□□□□□ -1.19
HDAC8-216ENST00000470998 RGS12O14924 1447 aa7.61□□□□□ -1.19
HDAC8-216ENST00000470998 TNS3Q68CZ2 1445 aa7.61□□□□□ -1.19
HDAC8-216ENST00000470998 SMAPO00193 183 aa7.6□□□□□ -1.19
HDAC8-216ENST00000470998 WASLO00401 505 aaPredicted RBP7.6□□□□□ -1.19
HDAC8-216ENST00000470998 XPCQ01831 940 aaPredicted RBP7.6□□□□□ -1.19
HDAC8-216ENST00000470998 RBM46Q8TBY0 533 aaKnown RBP7.6□□□□□ -1.19
HDAC8-216ENST00000470998 GJD4Q96KN9 370 aaPredicted RBP7.6□□□□□ -1.19
HDAC8-216ENST00000470998 PUS7Q96PZ0 661 aaKnown RBP7.6□□□□□ -1.19
HDAC8-216ENST00000470998 FMN2Q9NZ56 1722 aa7.6□□□□□ -1.19
HDAC8-216ENST00000470998 ATAD2Q6PL18 1390 aa7.59□□□□□ -1.19
HDAC8-216ENST00000470998 ADGRB2O60241 1585 aa7.59□□□□□ -1.19
HDAC8-216ENST00000470998 SAFB2Q14151 953 aaKnown RBP eCLIP7.59□□□□□ -1.19
HDAC8-216ENST00000470998 CCDC125Q86Z20 511 aa7.59□□□□□ -1.19
HDAC8-216ENST00000470998 UNC5CLQ8IV45 518 aa7.59□□□□□ -1.19
HDAC8-216ENST00000470998 BCL9LQ86UU0 1499 aa7.58□□□□□ -1.2
HDAC8-216ENST00000470998 RNF40O75150 1001 aa7.58□□□□□ -1.2
HDAC8-216ENST00000470998 NBPF1Q3BBV0 1214 aa7.58□□□□□ -1.2
HDAC8-216ENST00000470998 TMC1Q8TDI8 760 aa7.58□□□□□ -1.2
HDAC8-216ENST00000470998 LRCH3Q96II8 777 aa7.58□□□□□ -1.2
HDAC8-216ENST00000470998 ZFRQ96KR1 1074 aaKnown RBP7.58□□□□□ -1.2
HDAC8-216ENST00000470998 FAM198AQ9UFP1 575 aa7.58□□□□□ -1.2
HDAC8-216ENST00000470998 SLIT2O94813 1529 aa7.57□□□□□ -1.2
HDAC8-216ENST00000470998 TULP4Q9NRJ4 1543 aa7.57□□□□□ -1.2
HDAC8-216ENST00000470998 MINK1Q8N4C8 1332 aaPredicted RBP7.57□□□□□ -1.2
HDAC8-216ENST00000470998 OATP04181 439 aa7.57□□□□□ -1.2
HDAC8-216ENST00000470998 VPS72Q15906 364 aa7.57□□□□□ -1.2
HDAC8-216ENST00000470998 KRI1Q8N9T8 703 aaKnown RBP7.57□□□□□ -1.2
HDAC8-216ENST00000470998 TTC13Q8NBP0 860 aa7.57□□□□□ -1.2
HDAC8-216ENST00000470998 PMFBP1Q8TBY8 1022 aa7.57□□□□□ -1.2
HDAC8-216ENST00000470998 SMG6Q86US8 1419 aaKnown RBP7.57□□□□□ -1.2
HDAC8-216ENST00000470998 NINLQ9Y2I6 1382 aa7.57□□□□□ -1.2
HDAC8-216ENST00000470998 PRR36Q9H6K5 1346 aa7.56□□□□□ -1.2
HDAC8-216ENST00000470998 GPR37O15354 613 aa7.56□□□□□ -1.2
HDAC8-216ENST00000470998 PER1O15534 1290 aaPredicted RBP7.56□□□□□ -1.2
HDAC8-216ENST00000470998 PDE3BQ13370 1112 aa7.56□□□□□ -1.2
HDAC8-216ENST00000470998 PNISRQ8TF01 805 aaKnown RBP7.56□□□□□ -1.2
HDAC8-216ENST00000470998 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
HDAC8-216ENST00000470998 ADGRG1Q9Y653 693 aa7.56□□□□□ -1.2
HDAC8-216ENST00000470998 DNAJB2P25686 324 aa7.55□□□□□ -1.2
HDAC8-216ENST00000470998 PTPN5P54829 565 aa7.55□□□□□ -1.2
HDAC8-216ENST00000470998 THSD4Q6ZMP0 1018 aa7.55□□□□□ -1.2
HDAC8-216ENST00000470998 NGDNQ8NEJ9 315 aaKnown RBP7.55□□□□□ -1.2
HDAC8-216ENST00000470998 POLR3GLQ9BT43 218 aa7.55□□□□□ -1.2
HDAC8-216ENST00000470998 HCSTQ9UBK5 93 aa7.55□□□□□ -1.2
HDAC8-216ENST00000470998 USP32Q8NFA0 1604 aa7.55□□□□□ -1.2
HDAC8-216ENST00000470998 CENPJQ9HC77 1338 aaPredicted RBP7.54□□□□□ -1.2
HDAC8-216ENST00000470998 PLEKHG3A1L390 1219 aa7.54□□□□□ -1.2
HDAC8-216ENST00000470998 MAP2K5Q13163 448 aa7.54□□□□□ -1.2
HDAC8-216ENST00000470998 FAM161AQ3B820 660 aa7.54□□□□□ -1.2
HDAC8-216ENST00000470998 FAM9BQ8IZU0 186 aa7.54□□□□□ -1.2
HDAC8-216ENST00000470998 NGEFQ8N5V2 710 aa7.54□□□□□ -1.2
HDAC8-216ENST00000470998 NUDT16Q96DE0 195 aaKnown RBP7.54□□□□□ -1.2
HDAC8-216ENST00000470998 CDK19Q9BWU1 502 aa7.54□□□□□ -1.2
HDAC8-216ENST00000470998 KNSTRNQ9Y448 316 aa7.54□□□□□ -1.2
HDAC8-216ENST00000470998 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.54□□□□□ -1.2
HDAC8-216ENST00000470998 FAM83GA6ND36 823 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 FECHP22830 423 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 BCAMP50895 628 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 SAMD7Q7Z3H4 446 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 CABLES1Q8TDN4 633 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 NECTIN2Q92692 538 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 PANK3Q9H999 370 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 POLR3AO14802 1390 aaPredicted RBP7.53□□□□□ -1.2
HDAC8-216ENST00000470998 NSD2O96028 1365 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 ATP7BP35670 1465 aa7.53□□□□□ -1.2
HDAC8-216ENST00000470998 BLMP54132 1417 aaPredicted RBP7.52□□□□□ -1.2
HDAC8-216ENST00000470998 MARF1Q9Y4F3 1742 aaKnown RBP7.52□□□□□ -1.2
HDAC8-216ENST00000470998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.52□□□□□ -1.21
HDAC8-216ENST00000470998 SOWAHBA6NEL2 793 aa7.52□□□□□ -1.21
HDAC8-216ENST00000470998 SLF2Q8IX21 1173 aa7.52□□□□□ -1.21
HDAC8-216ENST00000470998 SEPT12Q8IYM1 358 aa7.52□□□□□ -1.21
HDAC8-216ENST00000470998 ZC3H15Q8WU90 426 aaKnown RBP7.52□□□□□ -1.21
HDAC8-216ENST00000470998 EYA1Q99502 592 aa7.52□□□□□ -1.21
HDAC8-216ENST00000470998 HPS5Q9UPZ3 1129 aa7.52□□□□□ -1.21
HDAC8-216ENST00000470998 NUDCQ9Y266 331 aa7.52□□□□□ -1.21
HDAC8-216ENST00000470998 RCCD1A6NED2 376 aa7.51□□□□□ -1.21
HDAC8-216ENST00000470998 C3orf80F5H4A9 247 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms