RNA–Protein interactions for RNA: ENST00000470977.5

SNHG12-205, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-205ENST00000470977 TMF1P82094 1093 aa18.37■□□□□ 0.53
SNHG12-205ENST00000470977 ITPK1Q13572 414 aa18.37■□□□□ 0.53
SNHG12-205ENST00000470977 CCDC87Q9NVE4 849 aa18.37■□□□□ 0.53
SNHG12-205ENST00000470977 KIF13BQ9NQT8 1826 aa18.37■□□□□ 0.53
SNHG12-205ENST00000470977 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
SNHG12-205ENST00000470977 RRS1Q15050 365 aaKnown RBP18.36■□□□□ 0.53
SNHG12-205ENST00000470977 SMG6Q86US8 1419 aaKnown RBP18.34■□□□□ 0.53
SNHG12-205ENST00000470977 ATP6V1AP38606 617 aa18.34■□□□□ 0.53
SNHG12-205ENST00000470977 TRAPPC3LQ5T215 181 aa18.34■□□□□ 0.53
SNHG12-205ENST00000470977 DCAF5Q96JK2 942 aa18.34■□□□□ 0.53
SNHG12-205ENST00000470977 PIM2Q9P1W9 311 aa18.34■□□□□ 0.53
SNHG12-205ENST00000470977 DALRD3Q5D0E6 543 aaKnown RBP18.33■□□□□ 0.52
SNHG12-205ENST00000470977 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.52
SNHG12-205ENST00000470977 NKX1-1Q15270 411 aaPredicted RBP18.32■□□□□ 0.52
SNHG12-205ENST00000470977 RTCBQ9Y3I0 505 aaKnown RBP18.32■□□□□ 0.52
SNHG12-205ENST00000470977 MAP2P11137 1827 aaKnown RBP18.32■□□□□ 0.52
SNHG12-205ENST00000470977 HSP90AB2PQ58FF8 381 aa18.31■□□□□ 0.52
SNHG12-205ENST00000470977 TMOD3Q9NYL9 352 aa18.31■□□□□ 0.52
SNHG12-205ENST00000470977 PARP3Q9Y6F1 533 aa18.31■□□□□ 0.52
SNHG12-205ENST00000470977 ITGB4P16144 1822 aa18.3■□□□□ 0.52
SNHG12-205ENST00000470977 GYS1P13807 737 aa18.3■□□□□ 0.52
SNHG12-205ENST00000470977 ARHGEF1Q92888 912 aaKnown RBP18.3■□□□□ 0.52
SNHG12-205ENST00000470977 PUS7Q96PZ0 661 aaKnown RBP18.3■□□□□ 0.52
SNHG12-205ENST00000470977 VEGFAP15692 232 aaPredicted RBP18.29■□□□□ 0.52
SNHG12-205ENST00000470977 PKD1L3Q7Z443 1732 aa18.29■□□□□ 0.52
SNHG12-205ENST00000470977 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
SNHG12-205ENST00000470977 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
SNHG12-205ENST00000470977 BRCA1P38398 1863 aaKnown RBP18.28■□□□□ 0.52
SNHG12-205ENST00000470977 INSRP06213 1382 aa18.28■□□□□ 0.52
SNHG12-205ENST00000470977 ADRA2BP18089 450 aa18.27■□□□□ 0.52
SNHG12-205ENST00000470977 RFC4P35249 363 aa18.27■□□□□ 0.52
SNHG12-205ENST00000470977 C4AP0C0L4 1744 aa18.26■□□□□ 0.51
SNHG12-205ENST00000470977 ARFGEF1Q9Y6D6 1849 aa18.26■□□□□ 0.51
SNHG12-205ENST00000470977 SIN3AQ96ST3 1273 aa18.26■□□□□ 0.51
SNHG12-205ENST00000470977 CARD11Q9BXL7 1154 aa18.26■□□□□ 0.51
SNHG12-205ENST00000470977 SPG7Q9UQ90 795 aa18.26■□□□□ 0.51
SNHG12-205ENST00000470977 ZC3H4Q9UPT8 1303 aaKnown RBP18.25■□□□□ 0.51
SNHG12-205ENST00000470977 GLTPD2A6NH11 291 aa18.25■□□□□ 0.51
SNHG12-205ENST00000470977 FYB1O15117 783 aa18.24■□□□□ 0.51
SNHG12-205ENST00000470977 CHRNA5P30532 468 aa18.24■□□□□ 0.51
SNHG12-205ENST00000470977 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
SNHG12-205ENST00000470977 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
SNHG12-205ENST00000470977 FLT4P35916 1363 aa18.23■□□□□ 0.51
SNHG12-205ENST00000470977 SLC4A9Q96Q91 983 aa18.23■□□□□ 0.51
SNHG12-205ENST00000470977 PCDH10Q9P2E7 1040 aa18.23■□□□□ 0.51
SNHG12-205ENST00000470977 FOXN1O15353 648 aa18.22■□□□□ 0.51
SNHG12-205ENST00000470977 RPS6KA4O75676 772 aa18.22■□□□□ 0.51
SNHG12-205ENST00000470977 RASSF7Q02833 373 aa18.22■□□□□ 0.51
SNHG12-205ENST00000470977 PRDM10Q9NQV6 1147 aa18.22■□□□□ 0.51
SNHG12-205ENST00000470977 KDRP35968 1356 aa18.21■□□□□ 0.51
SNHG12-205ENST00000470977 LMNB1P20700 586 aa18.21■□□□□ 0.51
SNHG12-205ENST00000470977 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
SNHG12-205ENST00000470977 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.51
SNHG12-205ENST00000470977 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
SNHG12-205ENST00000470977 DDR1Q08345 913 aa18.2■□□□□ 0.5
SNHG12-205ENST00000470977 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
SNHG12-205ENST00000470977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNHG12-205ENST00000470977 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
SNHG12-205ENST00000470977 SBF1O95248 1867 aa18.2■□□□□ 0.5
SNHG12-205ENST00000470977 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
SNHG12-205ENST00000470977 PHKG2P15735 406 aa18.19■□□□□ 0.5
SNHG12-205ENST00000470977 FKBP8Q14318 412 aa18.19■□□□□ 0.5
SNHG12-205ENST00000470977 IFNL2Q8IZJ0 200 aa18.19■□□□□ 0.5
SNHG12-205ENST00000470977 CREBZFQ9NS37 354 aa18.19■□□□□ 0.5
SNHG12-205ENST00000470977 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
SNHG12-205ENST00000470977 SRP68Q9UHB9 627 aaKnown RBP18.18■□□□□ 0.5
SNHG12-205ENST00000470977 POTECB2RU33 542 aa18.17■□□□□ 0.5
SNHG12-205ENST00000470977 NCAPD2Q15021 1401 aa18.16■□□□□ 0.5
SNHG12-205ENST00000470977 CTCFP49711 727 aaPredicted RBP18.16■□□□□ 0.5
SNHG12-205ENST00000470977 TRIM26Q12899 539 aaPredicted RBP18.15■□□□□ 0.5
SNHG12-205ENST00000470977 TESK2Q96S53 571 aa18.15■□□□□ 0.5
SNHG12-205ENST00000470977 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
SNHG12-205ENST00000470977 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
SNHG12-205ENST00000470977 USP42Q9H9J4 1324 aaKnown RBP18.14■□□□□ 0.49
SNHG12-205ENST00000470977 TONSLQ96HA7 1378 aa18.14■□□□□ 0.49
SNHG12-205ENST00000470977 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
SNHG12-205ENST00000470977 CHADLQ6NUI6 762 aa18.13■□□□□ 0.49
SNHG12-205ENST00000470977 EYA1Q99502 592 aa18.13■□□□□ 0.49
SNHG12-205ENST00000470977 ERVV-2B6SEH9 535 aa18.12■□□□□ 0.49
SNHG12-205ENST00000470977 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
SNHG12-205ENST00000470977 TM4SF1P30408 202 aa18.12■□□□□ 0.49
SNHG12-205ENST00000470977 DPY19L2Q6NUT2 758 aa18.12■□□□□ 0.49
SNHG12-205ENST00000470977 CNTNAP1P78357 1384 aa18.12■□□□□ 0.49
SNHG12-205ENST00000470977 CRKLP46109 303 aaKnown RBP18.11■□□□□ 0.49
SNHG12-205ENST00000470977 LBX1P52954 281 aa18.11■□□□□ 0.49
SNHG12-205ENST00000470977 ABHD8Q96I13 439 aa18.11■□□□□ 0.49
SNHG12-205ENST00000470977 ZNF831Q5JPB2 1677 aa18.1■□□□□ 0.49
SNHG12-205ENST00000470977 MYH14Q7Z406 1995 aaKnown RBP18.1■□□□□ 0.49
SNHG12-205ENST00000470977 ST20-MTHFSA0A0A6YYL1 179 aa18.09■□□□□ 0.49
SNHG12-205ENST00000470977 NFKBIEO00221 500 aa18.09■□□□□ 0.49
SNHG12-205ENST00000470977 TTLL6Q8N841 843 aa18.09■□□□□ 0.49
SNHG12-205ENST00000470977 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
SNHG12-205ENST00000470977 PTCD1O75127 700 aaKnown RBP18.08■□□□□ 0.48
SNHG12-205ENST00000470977 POTEIP0CG38 1075 aa18.08■□□□□ 0.48
SNHG12-205ENST00000470977 POTEJP0CG39 1038 aa18.08■□□□□ 0.48
SNHG12-205ENST00000470977 VEGFBP49765 207 aa18.08■□□□□ 0.48
SNHG12-205ENST00000470977 WBP1LQ9NX94 342 aa18.08■□□□□ 0.48
SNHG12-205ENST00000470977 WASHC2AQ641Q2 1341 aa18.07■□□□□ 0.48
SNHG12-205ENST00000470977 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
SNHG12-205ENST00000470977 CABP4P57796 275 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms