RNA–Protein interactions for RNA: ENST00000470266.5

RFC2-204, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-204ENST00000470266 LINC00116Q8NCU8 138 aa13.93□□□□□ -0.18
RFC2-204ENST00000470266 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
RFC2-204ENST00000470266 RNMTO43148 476 aaKnown RBP13.92□□□□□ -0.18
RFC2-204ENST00000470266 HMGB2P26583 209 aaKnown RBP13.92□□□□□ -0.18
RFC2-204ENST00000470266 AMIGO3Q86WK7 504 aa13.92□□□□□ -0.18
RFC2-204ENST00000470266 COL23A1Q86Y22 540 aaPredicted RBP13.92□□□□□ -0.18
RFC2-204ENST00000470266 PHACTR3Q96KR7 559 aa13.92□□□□□ -0.18
RFC2-204ENST00000470266 SGIP1Q9BQI5 828 aa13.92□□□□□ -0.18
RFC2-204ENST00000470266 GAS2L2Q8NHY3 880 aa13.91□□□□□ -0.18
RFC2-204ENST00000470266 SLC16A10Q8TF71 515 aa13.91□□□□□ -0.18
RFC2-204ENST00000470266 AK7Q96M32 723 aa13.91□□□□□ -0.18
RFC2-204ENST00000470266 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
RFC2-204ENST00000470266 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
RFC2-204ENST00000470266 UTRNP46939 3433 aa13.91□□□□□ -0.18
RFC2-204ENST00000470266 MSH5O43196 834 aa13.9□□□□□ -0.18
RFC2-204ENST00000470266 PTCD1O75127 700 aaKnown RBP13.9□□□□□ -0.18
RFC2-204ENST00000470266 RALBP1Q15311 655 aa13.9□□□□□ -0.18
RFC2-204ENST00000470266 SMIM5Q71RC9 77 aa13.9□□□□□ -0.18
RFC2-204ENST00000470266 C5P01031 1676 aa13.89□□□□□ -0.19
RFC2-204ENST00000470266 MRC1P22897 1456 aa13.89□□□□□ -0.19
RFC2-204ENST00000470266 MAP3K5Q99683 1374 aa13.89□□□□□ -0.19
RFC2-204ENST00000470266 FCHSD2O94868 740 aa13.89□□□□□ -0.19
RFC2-204ENST00000470266 C4BP0C0L5 1744 aa13.88□□□□□ -0.19
RFC2-204ENST00000470266 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
RFC2-204ENST00000470266 PHF14O94880 888 aa13.88□□□□□ -0.19
RFC2-204ENST00000470266 IL17REQ8NFR9 667 aa13.88□□□□□ -0.19
RFC2-204ENST00000470266 GOLGB1Q14789 3259 aaKnown RBP13.88□□□□□ -0.19
RFC2-204ENST00000470266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.87□□□□□ -0.19
RFC2-204ENST00000470266 GNPATO15228 680 aa13.87□□□□□ -0.19
RFC2-204ENST00000470266 SLC39A6Q13433 755 aa13.87□□□□□ -0.19
RFC2-204ENST00000470266 FLAD1Q8NFF5 587 aa13.87□□□□□ -0.19
RFC2-204ENST00000470266 ARXQ96QS3 562 aa13.87□□□□□ -0.19
RFC2-204ENST00000470266 TUBGCP6Q96RT7 1819 aa13.86□□□□□ -0.19
RFC2-204ENST00000470266 SSFA2P28290 1259 aa13.86□□□□□ -0.19
RFC2-204ENST00000470266 MSL1Q68DK7 614 aa13.86□□□□□ -0.19
RFC2-204ENST00000470266 FHDC1Q9C0D6 1143 aaPredicted RBP13.86□□□□□ -0.19
RFC2-204ENST00000470266 QSER1Q2KHR3 1735 aa13.86□□□□□ -0.19
RFC2-204ENST00000470266 ADAMTS7Q9UKP4 1686 aa13.85□□□□□ -0.19
RFC2-204ENST00000470266 POLD1P28340 1107 aa13.85□□□□□ -0.19
RFC2-204ENST00000470266 MYBBP1AQ9BQG0 1328 aaKnown RBP13.85□□□□□ -0.19
RFC2-204ENST00000470266 CNTNAP4Q9C0A0 1308 aa13.85□□□□□ -0.19
RFC2-204ENST00000470266 CEMIPQ8WUJ3 1361 aa13.84□□□□□ -0.19
RFC2-204ENST00000470266 SCN11AQ9UI33 1791 aa13.84□□□□□ -0.19
RFC2-204ENST00000470266 TEFQ10587 303 aa13.84□□□□□ -0.19
RFC2-204ENST00000470266 TAF1LQ8IZX4 1826 aa13.84□□□□□ -0.19
RFC2-204ENST00000470266 RC3H1Q5TC82 1133 aaKnown RBP13.83□□□□□ -0.2
RFC2-204ENST00000470266 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
RFC2-204ENST00000470266 SYT17Q9BSW7 474 aa13.83□□□□□ -0.2
RFC2-204ENST00000470266 RTCBQ9Y3I0 505 aaKnown RBP13.83□□□□□ -0.2
RFC2-204ENST00000470266 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
RFC2-204ENST00000470266 CRKLP46109 303 aaKnown RBP13.82□□□□□ -0.2
RFC2-204ENST00000470266 MCM10Q7L590 875 aa13.82□□□□□ -0.2
RFC2-204ENST00000470266 DNAJC10Q8IXB1 793 aa13.82□□□□□ -0.2
RFC2-204ENST00000470266 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
RFC2-204ENST00000470266 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
RFC2-204ENST00000470266 RPS6KA4O75676 772 aa13.81□□□□□ -0.2
RFC2-204ENST00000470266 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
RFC2-204ENST00000470266 TRAPPC3LQ5T215 181 aa13.81□□□□□ -0.2
RFC2-204ENST00000470266 ZNF790Q6PG37 636 aa13.81□□□□□ -0.2
RFC2-204ENST00000470266 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
RFC2-204ENST00000470266 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
RFC2-204ENST00000470266 RTF1Q92541 710 aaKnown RBP13.81□□□□□ -0.2
RFC2-204ENST00000470266 NEFMP07197 916 aa13.8□□□□□ -0.2
RFC2-204ENST00000470266 ADRA2BP18089 450 aa13.8□□□□□ -0.2
RFC2-204ENST00000470266 INTS5Q6P9B9 1019 aaKnown RBP13.8□□□□□ -0.2
RFC2-204ENST00000470266 VSIG10Q8N0Z9 540 aa13.8□□□□□ -0.2
RFC2-204ENST00000470266 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
RFC2-204ENST00000470266 ZNF496Q96IT1 587 aaPredicted RBP13.8□□□□□ -0.2
RFC2-204ENST00000470266 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
RFC2-204ENST00000470266 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
RFC2-204ENST00000470266 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
RFC2-204ENST00000470266 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
RFC2-204ENST00000470266 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
RFC2-204ENST00000470266 KCNQ3O43525 872 aa13.78□□□□□ -0.2
RFC2-204ENST00000470266 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
RFC2-204ENST00000470266 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
RFC2-204ENST00000470266 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
RFC2-204ENST00000470266 CCDC87Q9NVE4 849 aa13.78□□□□□ -0.2
RFC2-204ENST00000470266 MAPK8IP3Q9UPT6 1336 aa13.78□□□□□ -0.2
RFC2-204ENST00000470266 TJP1Q07157 1748 aa13.78□□□□□ -0.2
RFC2-204ENST00000470266 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
RFC2-204ENST00000470266 RFC4P35249 363 aa13.77□□□□□ -0.21
RFC2-204ENST00000470266 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
RFC2-204ENST00000470266 CICQ96RK0 1608 aaPredicted RBP13.77□□□□□ -0.21
RFC2-204ENST00000470266 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.21
RFC2-204ENST00000470266 ZBTB1Q9Y2K1 713 aa13.77□□□□□ -0.21
RFC2-204ENST00000470266 SOS1Q07889 1333 aaPredicted RBP13.76□□□□□ -0.21
RFC2-204ENST00000470266 GYS1P13807 737 aa13.76□□□□□ -0.21
RFC2-204ENST00000470266 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
RFC2-204ENST00000470266 MMP10P09238 476 aa13.75□□□□□ -0.21
RFC2-204ENST00000470266 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.21
RFC2-204ENST00000470266 THUMPD2Q9BTF0 503 aaKnown RBP13.75□□□□□ -0.21
RFC2-204ENST00000470266 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
RFC2-204ENST00000470266 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
RFC2-204ENST00000470266 DCAF8L1A6NGE4 600 aa13.74□□□□□ -0.21
RFC2-204ENST00000470266 STARD3NLO95772 234 aa13.74□□□□□ -0.21
RFC2-204ENST00000470266 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
RFC2-204ENST00000470266 CCDC146Q8IYE0 955 aa13.74□□□□□ -0.21
RFC2-204ENST00000470266 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
RFC2-204ENST00000470266 MIS18AQ9NYP9 233 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms