RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 MBIPQ9NS73 344 aa14.69□□□□□ -0.06
SREBF1-209ENST00000470247 TOGARAM1Q9Y4F4 1720 aa14.69□□□□□ -0.06
SREBF1-209ENST00000470247 BRWD3Q6RI45 1802 aa14.69□□□□□ -0.06
SREBF1-209ENST00000470247 KCNQ3O43525 872 aa14.68□□□□□ -0.06
SREBF1-209ENST00000470247 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
SREBF1-209ENST00000470247 CABP4P57796 275 aa14.68□□□□□ -0.06
SREBF1-209ENST00000470247 TEFQ10587 303 aa14.68□□□□□ -0.06
SREBF1-209ENST00000470247 PIGBQ92521 554 aa14.68□□□□□ -0.06
SREBF1-209ENST00000470247 TSR2Q969E8 191 aaKnown RBP14.68□□□□□ -0.06
SREBF1-209ENST00000470247 BABAM1Q9NWV8 329 aa14.68□□□□□ -0.06
SREBF1-209ENST00000470247 FANCIQ9NVI1 1328 aa14.67□□□□□ -0.06
SREBF1-209ENST00000470247 KCNQ2O43526 872 aa14.67□□□□□ -0.06
SREBF1-209ENST00000470247 PTF1AQ7RTS3 328 aa14.67□□□□□ -0.06
SREBF1-209ENST00000470247 ACSBG1Q96GR2 724 aa14.67□□□□□ -0.06
SREBF1-209ENST00000470247 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
SREBF1-209ENST00000470247 VIRMAQ69YN4 1812 aaKnown RBP14.66□□□□□ -0.06
SREBF1-209ENST00000470247 SIPA1L3O60292 1781 aaPredicted RBP14.66□□□□□ -0.06
SREBF1-209ENST00000470247 BTBD11A6QL63 1104 aa14.66□□□□□ -0.06
SREBF1-209ENST00000470247 SLC39A6Q13433 755 aa14.66□□□□□ -0.06
SREBF1-209ENST00000470247 MYH16Q9H6N6 1097 aa14.65□□□□□ -0.06
SREBF1-209ENST00000470247 TMOD3Q9NYL9 352 aa14.65□□□□□ -0.06
SREBF1-209ENST00000470247 TSPYL4Q9UJ04 414 aa14.65□□□□□ -0.06
SREBF1-209ENST00000470247 EIF4A1P60842 406 aaKnown RBP14.64□□□□□ -0.07
SREBF1-209ENST00000470247 ZNF790Q6PG37 636 aa14.64□□□□□ -0.07
SREBF1-209ENST00000470247 FAM196AQ6ZSG2 479 aa14.64□□□□□ -0.07
SREBF1-209ENST00000470247 ATG3Q9NT62 314 aa14.64□□□□□ -0.07
SREBF1-209ENST00000470247 HEG1Q9ULI3 1381 aa14.63□□□□□ -0.07
SREBF1-209ENST00000470247 EXOSC9Q06265 439 aaKnown RBP14.63□□□□□ -0.07
SREBF1-209ENST00000470247 KRT24Q2M2I5 525 aa14.63□□□□□ -0.07
SREBF1-209ENST00000470247 TSPYL6Q8N831 410 aa14.63□□□□□ -0.07
SREBF1-209ENST00000470247 C8orf58Q8NAV2 365 aa14.63□□□□□ -0.07
SREBF1-209ENST00000470247 ASAP1Q9ULH1 1129 aa14.63□□□□□ -0.07
SREBF1-209ENST00000470247 KAT6BQ8WYB5 2073 aa14.62□□□□□ -0.07
SREBF1-209ENST00000470247 ITGB4P16144 1822 aa14.62□□□□□ -0.07
SREBF1-209ENST00000470247 DOT1LQ8TEK3 1739 aa14.62□□□□□ -0.07
SREBF1-209ENST00000470247 SYTL4Q96C24 671 aaPredicted RBP14.62□□□□□ -0.07
SREBF1-209ENST00000470247 KDM3BQ7LBC6 1761 aa14.61□□□□□ -0.07
SREBF1-209ENST00000470247 ZNF496Q96IT1 587 aaPredicted RBP14.61□□□□□ -0.07
SREBF1-209ENST00000470247 VAMP4O75379 141 aa14.6□□□□□ -0.07
SREBF1-209ENST00000470247 BCL11BQ9C0K0 894 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-209ENST00000470247 SBF2Q86WG5 1849 aa14.59□□□□□ -0.07
SREBF1-209ENST00000470247 SLC4A9Q96Q91 983 aa14.59□□□□□ -0.07
SREBF1-209ENST00000470247 KCPQ6ZWJ8 1503 aa14.58□□□□□ -0.08
SREBF1-209ENST00000470247 PRAMEF22A3QJZ6 481 aa14.58□□□□□ -0.08
SREBF1-209ENST00000470247 ELL2O00472 640 aaPredicted RBP14.58□□□□□ -0.08
SREBF1-209ENST00000470247 GIGYF1O75420 1035 aaPredicted RBP14.58□□□□□ -0.08
SREBF1-209ENST00000470247 TRIM37O94972 964 aa14.58□□□□□ -0.08
SREBF1-209ENST00000470247 PAPPAQ13219 1627 aa14.58□□□□□ -0.08
SREBF1-209ENST00000470247 NHSQ6T4R5 1651 aa14.58□□□□□ -0.08
SREBF1-209ENST00000470247 TTC5Q8N0Z6 440 aa14.57□□□□□ -0.08
SREBF1-209ENST00000470247 PTCD1O75127 700 aaKnown RBP14.56□□□□□ -0.08
SREBF1-209ENST00000470247 CT47B1P0C2W7 299 aaPredicted RBP14.56□□□□□ -0.08
SREBF1-209ENST00000470247 TWISTNBQ3B726 338 aaPredicted RBP14.56□□□□□ -0.08
SREBF1-209ENST00000470247 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
SREBF1-209ENST00000470247 SMARCC1Q92922 1105 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-209ENST00000470247 USP16Q9Y5T5 823 aa14.55□□□□□ -0.08
SREBF1-209ENST00000470247 UBR2Q8IWV8 1755 aa14.55□□□□□ -0.08
SREBF1-209ENST00000470247 HOXB7P09629 217 aa14.54□□□□□ -0.08
SREBF1-209ENST00000470247 SNRPA1P09661 255 aaKnown RBP14.54□□□□□ -0.08
SREBF1-209ENST00000470247 VSIG10Q8N0Z9 540 aa14.54□□□□□ -0.08
SREBF1-209ENST00000470247 SOS1Q07889 1333 aaPredicted RBP14.54□□□□□ -0.08
SREBF1-209ENST00000470247 PALLDQ8WX93 1383 aa14.54□□□□□ -0.08
SREBF1-209ENST00000470247 BTAF1O14981 1849 aa14.53□□□□□ -0.08
SREBF1-209ENST00000470247 LOC102724428A0A0B4J2F2 783 aa14.53□□□□□ -0.08
SREBF1-209ENST00000470247 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
SREBF1-209ENST00000470247 SIK1P57059 783 aa14.53□□□□□ -0.08
SREBF1-209ENST00000470247 ITPK1Q13572 414 aa14.52□□□□□ -0.09
SREBF1-209ENST00000470247 DNAJC10Q8IXB1 793 aa14.52□□□□□ -0.09
SREBF1-209ENST00000470247 PROM2Q8N271 834 aa14.52□□□□□ -0.09
SREBF1-209ENST00000470247 SSH1Q8WYL5 1049 aa14.52□□□□□ -0.09
SREBF1-209ENST00000470247 ZNF428Q96B54 188 aa14.52□□□□□ -0.09
SREBF1-209ENST00000470247 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
SREBF1-209ENST00000470247 RCAN3Q9UKA8 241 aa14.52□□□□□ -0.09
SREBF1-209ENST00000470247 CENPBP07199 599 aaPredicted RBP14.51□□□□□ -0.09
SREBF1-209ENST00000470247 EP400Q96L91 3159 aa14.5□□□□□ -0.09
SREBF1-209ENST00000470247 TCERG1O14776 1098 aaKnown RBP14.5□□□□□ -0.09
SREBF1-209ENST00000470247 PLSCR1O15162 318 aa14.5□□□□□ -0.09
SREBF1-209ENST00000470247 BCAR3O75815 825 aa14.5□□□□□ -0.09
SREBF1-209ENST00000470247 EIF2S2P20042 333 aaKnown RBP14.5□□□□□ -0.09
SREBF1-209ENST00000470247 BRPF1P55201 1214 aaPredicted RBP14.5□□□□□ -0.09
SREBF1-209ENST00000470247 KCNQ4P56696 695 aa14.5□□□□□ -0.09
SREBF1-209ENST00000470247 PDIA6Q15084 440 aa14.5□□□□□ -0.09
SREBF1-209ENST00000470247 NECTIN2Q92692 538 aa14.5□□□□□ -0.09
SREBF1-209ENST00000470247 APBA3O96018 575 aa14.49□□□□□ -0.09
SREBF1-209ENST00000470247 CYP19A1P11511 503 aaPredicted RBP14.49□□□□□ -0.09
SREBF1-209ENST00000470247 ATP6V1AP38606 617 aa14.49□□□□□ -0.09
SREBF1-209ENST00000470247 ALDH1L2Q3SY69 923 aa14.49□□□□□ -0.09
SREBF1-209ENST00000470247 HDGFL1Q5TGJ6 251 aa14.49□□□□□ -0.09
SREBF1-209ENST00000470247 LRP10Q7Z4F1 713 aa14.49□□□□□ -0.09
SREBF1-209ENST00000470247 MRPL50Q8N5N7 158 aaKnown RBP14.49□□□□□ -0.09
SREBF1-209ENST00000470247 TEX13AQ9BXU3 409 aaPredicted RBP14.49□□□□□ -0.09
SREBF1-209ENST00000470247 LRRC4BQ9NT99 713 aa14.49□□□□□ -0.09
SREBF1-209ENST00000470247 C5P01031 1676 aa14.49□□□□□ -0.09
SREBF1-209ENST00000470247 NBPF26B4DH59 902 aa14.48□□□□□ -0.09
SREBF1-209ENST00000470247 A1BGP04217 495 aa14.48□□□□□ -0.09
SREBF1-209ENST00000470247 PROSER3Q2NL68 480 aa14.48□□□□□ -0.09
SREBF1-209ENST00000470247 NBPF14Q5TI25 921 aa14.48□□□□□ -0.09
SREBF1-209ENST00000470247 CCDC30Q5VVM6 783 aa14.48□□□□□ -0.09
SREBF1-209ENST00000470247 NBPF10Q6P3W6 841 aaKnown RBP14.48□□□□□ -0.09
SREBF1-209ENST00000470247 NBPF15Q8N660 670 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms