RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
HDAC3-204ENST00000469207 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
HDAC3-204ENST00000469207 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
HDAC3-204ENST00000469207 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
HDAC3-204ENST00000469207 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
HDAC3-204ENST00000469207 ZNF526Q8TF50 670 aaPredicted RBP16.87■□□□□ 0.29
HDAC3-204ENST00000469207 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
HDAC3-204ENST00000469207 MMP10P09238 476 aa16.85■□□□□ 0.29
HDAC3-204ENST00000469207 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
HDAC3-204ENST00000469207 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
HDAC3-204ENST00000469207 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
HDAC3-204ENST00000469207 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
HDAC3-204ENST00000469207 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
HDAC3-204ENST00000469207 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
HDAC3-204ENST00000469207 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
HDAC3-204ENST00000469207 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
HDAC3-204ENST00000469207 RTCBQ9Y3I0 505 aaKnown RBP16.84■□□□□ 0.29
HDAC3-204ENST00000469207 CABP4P57796 275 aa16.83■□□□□ 0.28
HDAC3-204ENST00000469207 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
HDAC3-204ENST00000469207 KDRP35968 1356 aa16.82■□□□□ 0.28
HDAC3-204ENST00000469207 A0A0G2JLW4 131 aa16.82■□□□□ 0.28
HDAC3-204ENST00000469207 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
HDAC3-204ENST00000469207 MTHFSP49914 203 aa16.82■□□□□ 0.28
HDAC3-204ENST00000469207 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
HDAC3-204ENST00000469207 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
HDAC3-204ENST00000469207 GPBP1L1Q9HC44 474 aaPredicted RBP16.81■□□□□ 0.28
HDAC3-204ENST00000469207 HSP90AB1P08238 724 aaKnown RBP16.8■□□□□ 0.28
HDAC3-204ENST00000469207 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
HDAC3-204ENST00000469207 RPS6KA4O75676 772 aa16.79■□□□□ 0.28
HDAC3-204ENST00000469207 GYS1P13807 737 aa16.79■□□□□ 0.28
HDAC3-204ENST00000469207 IL13P35225 146 aa16.79■□□□□ 0.28
HDAC3-204ENST00000469207 AMOTQ4VCS5 1084 aa16.79■□□□□ 0.28
HDAC3-204ENST00000469207 RC3H1Q5TC82 1133 aaKnown RBP16.79■□□□□ 0.28
HDAC3-204ENST00000469207 NLGN1Q8N2Q7 840 aa16.79■□□□□ 0.28
HDAC3-204ENST00000469207 ADCY9O60503 1353 aa16.78■□□□□ 0.28
HDAC3-204ENST00000469207 RFC4P35249 363 aa16.78■□□□□ 0.28
HDAC3-204ENST00000469207 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
HDAC3-204ENST00000469207 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
HDAC3-204ENST00000469207 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
HDAC3-204ENST00000469207 DPEP1P16444 411 aa16.77■□□□□ 0.28
HDAC3-204ENST00000469207 C1orf141Q5JVX7 400 aa16.77■□□□□ 0.28
HDAC3-204ENST00000469207 LGR6Q9HBX8 967 aa16.77■□□□□ 0.28
HDAC3-204ENST00000469207 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.27
HDAC3-204ENST00000469207 CNTNAP4Q9C0A0 1308 aa16.76■□□□□ 0.27
HDAC3-204ENST00000469207 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
HDAC3-204ENST00000469207 CEP350Q5VT06 3117 aa16.76■□□□□ 0.27
HDAC3-204ENST00000469207 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
HDAC3-204ENST00000469207 CICQ96RK0 1608 aaPredicted RBP16.75■□□□□ 0.27
HDAC3-204ENST00000469207 HMOX1P09601 288 aa16.75■□□□□ 0.27
HDAC3-204ENST00000469207 CRKLP46109 303 aaKnown RBP16.75■□□□□ 0.27
HDAC3-204ENST00000469207 TGFB2P61812 414 aa16.75■□□□□ 0.27
HDAC3-204ENST00000469207 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
HDAC3-204ENST00000469207 KCNA3P22001 575 aa16.74■□□□□ 0.27
HDAC3-204ENST00000469207 FKBP8Q14318 412 aa16.74■□□□□ 0.27
HDAC3-204ENST00000469207 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
HDAC3-204ENST00000469207 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
HDAC3-204ENST00000469207 KIF3CO14782 793 aa16.73■□□□□ 0.27
HDAC3-204ENST00000469207 ADRA2BP18089 450 aa16.73■□□□□ 0.27
HDAC3-204ENST00000469207 SLC39A6Q13433 755 aa16.73■□□□□ 0.27
HDAC3-204ENST00000469207 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
HDAC3-204ENST00000469207 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
HDAC3-204ENST00000469207 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
HDAC3-204ENST00000469207 PLEKHG2Q9H7P9 1386 aa16.73■□□□□ 0.27
HDAC3-204ENST00000469207 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
HDAC3-204ENST00000469207 KIAA1551Q9HCM1 1747 aa16.73■□□□□ 0.27
HDAC3-204ENST00000469207 FCHSD2O94868 740 aa16.72■□□□□ 0.27
HDAC3-204ENST00000469207 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
HDAC3-204ENST00000469207 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
HDAC3-204ENST00000469207 DDR1Q08345 913 aa16.71■□□□□ 0.27
HDAC3-204ENST00000469207 C10orf71Q711Q0 1435 aa16.7■□□□□ 0.26
HDAC3-204ENST00000469207 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
HDAC3-204ENST00000469207 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
HDAC3-204ENST00000469207 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
HDAC3-204ENST00000469207 SLC52A2Q9HAB3 445 aa16.7■□□□□ 0.26
HDAC3-204ENST00000469207 KIF13BQ9NQT8 1826 aa16.7■□□□□ 0.26
HDAC3-204ENST00000469207 PER1O15534 1290 aaPredicted RBP16.69■□□□□ 0.26
HDAC3-204ENST00000469207 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
HDAC3-204ENST00000469207 HSPA6P17066 643 aa16.69■□□□□ 0.26
HDAC3-204ENST00000469207 CHRNA5P30532 468 aa16.69■□□□□ 0.26
HDAC3-204ENST00000469207 MTHFSDQ2M296 383 aaKnown RBP16.69■□□□□ 0.26
HDAC3-204ENST00000469207 C4AP0C0L4 1744 aa16.69■□□□□ 0.26
HDAC3-204ENST00000469207 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
HDAC3-204ENST00000469207 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
HDAC3-204ENST00000469207 TM4SF1P30408 202 aa16.67■□□□□ 0.26
HDAC3-204ENST00000469207 TJP1Q07157 1748 aa16.67■□□□□ 0.26
HDAC3-204ENST00000469207 POLRMTO00411 1230 aaKnown RBP16.66■□□□□ 0.26
HDAC3-204ENST00000469207 CYP19A1P11511 503 aaPredicted RBP16.66■□□□□ 0.26
HDAC3-204ENST00000469207 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
HDAC3-204ENST00000469207 PIM2Q9P1W9 311 aa16.66■□□□□ 0.26
HDAC3-204ENST00000469207 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
HDAC3-204ENST00000469207 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
HDAC3-204ENST00000469207 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
HDAC3-204ENST00000469207 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
HDAC3-204ENST00000469207 ZPR1O75312 459 aa16.64■□□□□ 0.25
HDAC3-204ENST00000469207 SOS1Q07889 1333 aaPredicted RBP16.64■□□□□ 0.25
HDAC3-204ENST00000469207 NFIXQ14938 502 aa16.63■□□□□ 0.25
HDAC3-204ENST00000469207 DALRD3Q5D0E6 543 aaKnown RBP16.63■□□□□ 0.25
HDAC3-204ENST00000469207 BCL2L12Q9HB09 334 aa16.63■□□□□ 0.25
HDAC3-204ENST00000469207 ADAMTS7Q9UKP4 1686 aa16.62■□□□□ 0.25
HDAC3-204ENST00000469207 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 387.9 ms