RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 ARFGEF1Q9Y6D6 1849 aa11.39□□□□□ -0.59
NCSTN-212ENST00000469159 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
NCSTN-212ENST00000469159 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
NCSTN-212ENST00000469159 FOXN1O15353 648 aa11.39□□□□□ -0.59
NCSTN-212ENST00000469159 AMPHP49418 695 aa11.39□□□□□ -0.59
NCSTN-212ENST00000469159 TMF1P82094 1093 aa11.39□□□□□ -0.59
NCSTN-212ENST00000469159 HDGFL2Q7Z4V5 671 aaPredicted RBP11.39□□□□□ -0.59
NCSTN-212ENST00000469159 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
NCSTN-212ENST00000469159 CYP27B1O15528 508 aa11.38□□□□□ -0.59
NCSTN-212ENST00000469159 TATP17735 454 aaPredicted RBP11.38□□□□□ -0.59
NCSTN-212ENST00000469159 ITPK1Q13572 414 aa11.38□□□□□ -0.59
NCSTN-212ENST00000469159 DALRD3Q5D0E6 543 aaKnown RBP11.38□□□□□ -0.59
NCSTN-212ENST00000469159 USHBP1Q8N6Y0 703 aa11.38□□□□□ -0.59
NCSTN-212ENST00000469159 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
NCSTN-212ENST00000469159 TRAPPC3LQ5T215 181 aa11.37□□□□□ -0.59
NCSTN-212ENST00000469159 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
NCSTN-212ENST00000469159 SLC12A5Q9H2X9 1139 aa11.37□□□□□ -0.59
NCSTN-212ENST00000469159 FBLN1P23142 703 aa11.36□□□□□ -0.59
NCSTN-212ENST00000469159 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
NCSTN-212ENST00000469159 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
NCSTN-212ENST00000469159 TERF2IPQ9NYB0 399 aa11.36□□□□□ -0.59
NCSTN-212ENST00000469159 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
NCSTN-212ENST00000469159 ITGB4P16144 1822 aa11.36□□□□□ -0.59
NCSTN-212ENST00000469159 C4AP0C0L4 1744 aa11.35□□□□□ -0.59
NCSTN-212ENST00000469159 GYS1P13807 737 aa11.35□□□□□ -0.59
NCSTN-212ENST00000469159 CTCFP49711 727 aaPredicted RBP11.35□□□□□ -0.59
NCSTN-212ENST00000469159 NKX1-1Q15270 411 aaPredicted RBP11.35□□□□□ -0.59
NCSTN-212ENST00000469159 ABHD8Q96I13 439 aa11.35□□□□□ -0.59
NCSTN-212ENST00000469159 MKRN1Q9UHC7 482 aaKnown RBP11.35□□□□□ -0.59
NCSTN-212ENST00000469159 RTCBQ9Y3I0 505 aaKnown RBP11.35□□□□□ -0.59
NCSTN-212ENST00000469159 A0A1W2PP64 1363 aa11.35□□□□□ -0.59
NCSTN-212ENST00000469159 RTL1A6NKG5 1358 aa11.35□□□□□ -0.59
NCSTN-212ENST00000469159 SBF1O95248 1867 aa11.35□□□□□ -0.59
NCSTN-212ENST00000469159 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
NCSTN-212ENST00000469159 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
NCSTN-212ENST00000469159 COG3Q96JB2 828 aa11.34□□□□□ -0.59
NCSTN-212ENST00000469159 ASAP1Q9ULH1 1129 aa11.34□□□□□ -0.59
NCSTN-212ENST00000469159 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
NCSTN-212ENST00000469159 POTECB2RU33 542 aa11.33□□□□□ -0.6
NCSTN-212ENST00000469159 MLLT1Q03111 559 aaPredicted RBP11.33□□□□□ -0.6
NCSTN-212ENST00000469159 AIDAQ96BJ3 306 aa11.33□□□□□ -0.6
NCSTN-212ENST00000469159 SMG6Q86US8 1419 aaKnown RBP11.33□□□□□ -0.6
NCSTN-212ENST00000469159 CNTNAP1P78357 1384 aa11.32□□□□□ -0.6
NCSTN-212ENST00000469159 LMNB1P20700 586 aa11.32□□□□□ -0.6
NCSTN-212ENST00000469159 RFC4P35249 363 aa11.32□□□□□ -0.6
NCSTN-212ENST00000469159 RGS19P49795 217 aa11.32□□□□□ -0.6
NCSTN-212ENST00000469159 TMOD3Q9NYL9 352 aa11.32□□□□□ -0.6
NCSTN-212ENST00000469159 CHRNA5P30532 468 aa11.31□□□□□ -0.6
NCSTN-212ENST00000469159 LBX1P52954 281 aa11.31□□□□□ -0.6
NCSTN-212ENST00000469159 RASSF7Q02833 373 aa11.31□□□□□ -0.6
NCSTN-212ENST00000469159 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
NCSTN-212ENST00000469159 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
NCSTN-212ENST00000469159 L3MBTL2Q969R5 705 aa11.31□□□□□ -0.6
NCSTN-212ENST00000469159 ATG3Q9NT62 314 aa11.31□□□□□ -0.6
NCSTN-212ENST00000469159 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
NCSTN-212ENST00000469159 KDRP35968 1356 aa11.29□□□□□ -0.6
NCSTN-212ENST00000469159 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
NCSTN-212ENST00000469159 HSP90AB2PQ58FF8 381 aa11.29□□□□□ -0.6
NCSTN-212ENST00000469159 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
NCSTN-212ENST00000469159 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
NCSTN-212ENST00000469159 INSRP06213 1382 aa11.28□□□□□ -0.6
NCSTN-212ENST00000469159 VEGFBP49765 207 aa11.28□□□□□ -0.6
NCSTN-212ENST00000469159 DDR1Q08345 913 aa11.28□□□□□ -0.6
NCSTN-212ENST00000469159 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
NCSTN-212ENST00000469159 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
NCSTN-212ENST00000469159 SPG7Q9UQ90 795 aa11.28□□□□□ -0.6
NCSTN-212ENST00000469159 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
NCSTN-212ENST00000469159 FKBP8Q14318 412 aa11.27□□□□□ -0.61
NCSTN-212ENST00000469159 CCDC85CA6NKD9 419 aa11.26□□□□□ -0.61
NCSTN-212ENST00000469159 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
NCSTN-212ENST00000469159 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
NCSTN-212ENST00000469159 PASKQ96RG2 1323 aa11.26□□□□□ -0.61
NCSTN-212ENST00000469159 ZNF831Q5JPB2 1677 aa11.26□□□□□ -0.61
NCSTN-212ENST00000469159 POLRMTO00411 1230 aaKnown RBP11.25□□□□□ -0.61
NCSTN-212ENST00000469159 POTEIP0CG38 1075 aa11.25□□□□□ -0.61
NCSTN-212ENST00000469159 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
NCSTN-212ENST00000469159 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
NCSTN-212ENST00000469159 KIF24Q5T7B8 1368 aa11.25□□□□□ -0.61
NCSTN-212ENST00000469159 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
NCSTN-212ENST00000469159 TIAM2Q8IVF5 1701 aa11.24□□□□□ -0.61
NCSTN-212ENST00000469159 NFKBIEO00221 500 aa11.24□□□□□ -0.61
NCSTN-212ENST00000469159 PHKG2P15735 406 aa11.24□□□□□ -0.61
NCSTN-212ENST00000469159 TM4SF1P30408 202 aa11.24□□□□□ -0.61
NCSTN-212ENST00000469159 IFNL2Q8IZJ0 200 aa11.24□□□□□ -0.61
NCSTN-212ENST00000469159 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
NCSTN-212ENST00000469159 SRP68Q9UHB9 627 aaKnown RBP11.24□□□□□ -0.61
NCSTN-212ENST00000469159 FLT4P35916 1363 aa11.24□□□□□ -0.61
NCSTN-212ENST00000469159 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
NCSTN-212ENST00000469159 TMEM88BA6NKF7 163 aa11.23□□□□□ -0.61
NCSTN-212ENST00000469159 FYB1O15117 783 aa11.23□□□□□ -0.61
NCSTN-212ENST00000469159 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
NCSTN-212ENST00000469159 VIRMAQ69YN4 1812 aaKnown RBP11.23□□□□□ -0.61
NCSTN-212ENST00000469159 MAP2K1Q02750 393 aaPredicted RBP11.22□□□□□ -0.61
NCSTN-212ENST00000469159 TONSLQ96HA7 1378 aa11.22□□□□□ -0.61
NCSTN-212ENST00000469159 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
NCSTN-212ENST00000469159 MYH14Q7Z406 1995 aaKnown RBP11.21□□□□□ -0.61
NCSTN-212ENST00000469159 ERVV-2B6SEH9 535 aa11.21□□□□□ -0.61
NCSTN-212ENST00000469159 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
NCSTN-212ENST00000469159 ERFEQ4G0M1 354 aa11.21□□□□□ -0.61
NCSTN-212ENST00000469159 LDHDQ86WU2 507 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 200.6 ms