RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 U2SURPO15042 1029 aaKnown RBP23.01■■□□□ 1.27
SSBP1-207ENST00000468267 PPP2R1AP30153 589 aa23.01■■□□□ 1.27
SSBP1-207ENST00000468267 ATP6V1AP38606 617 aa23.01■■□□□ 1.27
SSBP1-207ENST00000468267 CFAP53Q96M91 514 aa23.01■■□□□ 1.27
SSBP1-207ENST00000468267 ARXQ96QS3 562 aa23.01■■□□□ 1.27
SSBP1-207ENST00000468267 ITPK1Q13572 414 aa23■■□□□ 1.27
SSBP1-207ENST00000468267 NFATC2IPQ8NCF5 419 aa23■■□□□ 1.27
SSBP1-207ENST00000468267 LINC00116Q8NCU8 138 aa23■■□□□ 1.27
SSBP1-207ENST00000468267 FLAD1Q8NFF5 587 aa23■■□□□ 1.27
SSBP1-207ENST00000468267 AK7Q96M32 723 aa23■■□□□ 1.27
SSBP1-207ENST00000468267 UBR3Q6ZT12 1888 aa23■■□□□ 1.27
SSBP1-207ENST00000468267 VIRMAQ69YN4 1812 aaKnown RBP22.99■■□□□ 1.27
SSBP1-207ENST00000468267 MTHFSDQ2M296 383 aaKnown RBP22.99■■□□□ 1.27
SSBP1-207ENST00000468267 ZNF831Q5JPB2 1677 aa22.98■■□□□ 1.27
SSBP1-207ENST00000468267 FHDC1Q9C0D6 1143 aaPredicted RBP22.98■■□□□ 1.27
SSBP1-207ENST00000468267 POLD1P28340 1107 aa22.97■■□□□ 1.27
SSBP1-207ENST00000468267 SLC4A9Q96Q91 983 aa22.97■■□□□ 1.27
SSBP1-207ENST00000468267 SYT17Q9BSW7 474 aa22.97■■□□□ 1.27
SSBP1-207ENST00000468267 RBM42Q9BTD8 480 aaKnown RBP22.97■■□□□ 1.27
SSBP1-207ENST00000468267 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
SSBP1-207ENST00000468267 AMIGO3Q86WK7 504 aa22.96■■□□□ 1.27
SSBP1-207ENST00000468267 RNMTO43148 476 aaKnown RBP22.95■■□□□ 1.26
SSBP1-207ENST00000468267 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
SSBP1-207ENST00000468267 NUDCQ9Y266 331 aa22.94■■□□□ 1.26
SSBP1-207ENST00000468267 UTRNP46939 3433 aa22.94■■□□□ 1.26
SSBP1-207ENST00000468267 MAP3K5Q99683 1374 aa22.93■■□□□ 1.26
SSBP1-207ENST00000468267 SSFA2P28290 1259 aa22.93■■□□□ 1.26
SSBP1-207ENST00000468267 ADAMTS7Q9UKP4 1686 aa22.93■■□□□ 1.26
SSBP1-207ENST00000468267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.92■■□□□ 1.26
SSBP1-207ENST00000468267 SMIM5Q71RC9 77 aa22.92■■□□□ 1.26
SSBP1-207ENST00000468267 COL5A3P25940 1745 aaPredicted RBP22.91■■□□□ 1.26
SSBP1-207ENST00000468267 DCAF8L1A6NGE4 600 aa22.91■■□□□ 1.26
SSBP1-207ENST00000468267 GNPATO15228 680 aa22.91■■□□□ 1.26
SSBP1-207ENST00000468267 PTCD1O75127 700 aaKnown RBP22.91■■□□□ 1.26
SSBP1-207ENST00000468267 PHF14O94880 888 aa22.91■■□□□ 1.26
SSBP1-207ENST00000468267 MSL1Q68DK7 614 aa22.91■■□□□ 1.26
SSBP1-207ENST00000468267 RSPH6AQ9H0K4 717 aa22.91■■□□□ 1.26
SSBP1-207ENST00000468267 MRC1P22897 1456 aa22.91■■□□□ 1.26
SSBP1-207ENST00000468267 RC3H1Q5TC82 1133 aaKnown RBP22.9■■□□□ 1.26
SSBP1-207ENST00000468267 GAS2L2Q8NHY3 880 aa22.9■■□□□ 1.26
SSBP1-207ENST00000468267 GOLGB1Q14789 3259 aaKnown RBP22.9■■□□□ 1.26
SSBP1-207ENST00000468267 MYH14Q7Z406 1995 aaKnown RBP22.9■■□□□ 1.26
SSBP1-207ENST00000468267 PRKAR2BP31323 418 aa22.89■■□□□ 1.25
SSBP1-207ENST00000468267 GNAT3A8MTJ3 354 aa22.88■■□□□ 1.25
SSBP1-207ENST00000468267 U2AF1L5P0DN76 240 aaPredicted RBP22.88■■□□□ 1.25
SSBP1-207ENST00000468267 U2AF1Q01081 240 aaKnown RBP eCLIP22.88■■□□□ 1.25
SSBP1-207ENST00000468267 PHACTR3Q96KR7 559 aa22.88■■□□□ 1.25
SSBP1-207ENST00000468267 CNTNAP4Q9C0A0 1308 aa22.87■■□□□ 1.25
SSBP1-207ENST00000468267 FCHSD2O94868 740 aa22.87■■□□□ 1.25
SSBP1-207ENST00000468267 DDX10Q13206 875 aaKnown RBP22.86■■□□□ 1.25
SSBP1-207ENST00000468267 RTCBQ9Y3I0 505 aaKnown RBP22.86■■□□□ 1.25
SSBP1-207ENST00000468267 SLC39A6Q13433 755 aa22.85■■□□□ 1.25
SSBP1-207ENST00000468267 TRAPPC3LQ5T215 181 aa22.85■■□□□ 1.25
SSBP1-207ENST00000468267 IL17REQ8NFR9 667 aa22.85■■□□□ 1.25
SSBP1-207ENST00000468267 CICQ96RK0 1608 aaPredicted RBP22.85■■□□□ 1.25
SSBP1-207ENST00000468267 TJP1Q07157 1748 aa22.85■■□□□ 1.25
SSBP1-207ENST00000468267 RPS6KA4O75676 772 aa22.84■■□□□ 1.25
SSBP1-207ENST00000468267 KLHL34Q8N239 644 aa22.84■■□□□ 1.25
SSBP1-207ENST00000468267 CRKLP46109 303 aaKnown RBP22.82■■□□□ 1.24
SSBP1-207ENST00000468267 TEFQ10587 303 aa22.81■■□□□ 1.24
SSBP1-207ENST00000468267 RALBP1Q15311 655 aa22.81■■□□□ 1.24
SSBP1-207ENST00000468267 ARHGEF1Q92888 912 aaKnown RBP22.81■■□□□ 1.24
SSBP1-207ENST00000468267 KCPQ6ZWJ8 1503 aa22.81■■□□□ 1.24
SSBP1-207ENST00000468267 SIPA1L3O60292 1781 aaPredicted RBP22.81■■□□□ 1.24
SSBP1-207ENST00000468267 DNAJC10Q8IXB1 793 aa22.8■■□□□ 1.24
SSBP1-207ENST00000468267 CEMIPQ8WUJ3 1361 aa22.79■■□□□ 1.24
SSBP1-207ENST00000468267 UBR2Q8IWV8 1755 aa22.79■■□□□ 1.24
SSBP1-207ENST00000468267 INTS5Q6P9B9 1019 aaKnown RBP22.79■■□□□ 1.24
SSBP1-207ENST00000468267 NLGN2Q8NFZ4 835 aa22.79■■□□□ 1.24
SSBP1-207ENST00000468267 RFC4P35249 363 aa22.78■■□□□ 1.24
SSBP1-207ENST00000468267 VSIG10Q8N0Z9 540 aa22.78■■□□□ 1.24
SSBP1-207ENST00000468267 CD2APQ9Y5K6 639 aa22.78■■□□□ 1.24
SSBP1-207ENST00000468267 CYP19A1P11511 503 aaPredicted RBP22.76■■□□□ 1.23
SSBP1-207ENST00000468267 TTC5Q8N0Z6 440 aa22.76■■□□□ 1.23
SSBP1-207ENST00000468267 NLGN1Q8N2Q7 840 aa22.76■■□□□ 1.23
SSBP1-207ENST00000468267 CCDC87Q9NVE4 849 aa22.76■■□□□ 1.23
SSBP1-207ENST00000468267 C4AP0C0L4 1744 aa22.76■■□□□ 1.23
SSBP1-207ENST00000468267 ZEB1P37275 1124 aaPredicted RBP22.75■■□□□ 1.23
SSBP1-207ENST00000468267 ZNF790Q6PG37 636 aa22.75■■□□□ 1.23
SSBP1-207ENST00000468267 HTATSF1O43719 755 aaKnown RBP22.74■■□□□ 1.23
SSBP1-207ENST00000468267 GYS1P13807 737 aa22.74■■□□□ 1.23
SSBP1-207ENST00000468267 YY1P25490 414 aa22.74■■□□□ 1.23
SSBP1-207ENST00000468267 GPR162Q16538 588 aa22.74■■□□□ 1.23
SSBP1-207ENST00000468267 RTF1Q92541 710 aaKnown RBP22.74■■□□□ 1.23
SSBP1-207ENST00000468267 CHD4Q14839 1912 aa22.73■■□□□ 1.23
SSBP1-207ENST00000468267 MMP10P09238 476 aa22.73■■□□□ 1.23
SSBP1-207ENST00000468267 ZNF496Q96IT1 587 aaPredicted RBP22.73■■□□□ 1.23
SSBP1-207ENST00000468267 MCM10Q7L590 875 aa22.72■■□□□ 1.23
SSBP1-207ENST00000468267 PLEKHF1Q96S99 279 aa22.72■■□□□ 1.23
SSBP1-207ENST00000468267 DLG5Q8TDM6 1919 aa22.71■■□□□ 1.23
SSBP1-207ENST00000468267 BTBD11A6QL63 1104 aa22.71■■□□□ 1.23
SSBP1-207ENST00000468267 NEFMP07197 916 aa22.71■■□□□ 1.23
SSBP1-207ENST00000468267 SOS1Q07889 1333 aaPredicted RBP22.71■■□□□ 1.23
SSBP1-207ENST00000468267 STARD3NLO95772 234 aa22.7■■□□□ 1.22
SSBP1-207ENST00000468267 PNNQ9H307 717 aaKnown RBP22.7■■□□□ 1.22
SSBP1-207ENST00000468267 SRP68Q9UHB9 627 aaKnown RBP22.7■■□□□ 1.22
SSBP1-207ENST00000468267 MYBBP1AQ9BQG0 1328 aaKnown RBP22.7■■□□□ 1.22
SSBP1-207ENST00000468267 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
SSBP1-207ENST00000468267 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
SSBP1-207ENST00000468267 DCTN1Q14203 1278 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms