RNA–Protein interactions for RNA: ENST00000467515.1

EPHB4-203, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-203ENST00000467515 TAF7Q15545 349 aaPredicted RBP21.44■■□□□ 1.02
EPHB4-203ENST00000467515 NFATC2IPQ8NCF5 419 aa21.44■■□□□ 1.02
EPHB4-203ENST00000467515 BTAF1O14981 1849 aa21.43■■□□□ 1.02
EPHB4-203ENST00000467515 PRIM1P49642 420 aaKnown RBP21.43■■□□□ 1.02
EPHB4-203ENST00000467515 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
EPHB4-203ENST00000467515 GOLGA2Q08379 1002 aa21.42■■□□□ 1.02
EPHB4-203ENST00000467515 CFAP44Q96MT7 982 aa21.42■■□□□ 1.02
EPHB4-203ENST00000467515 IFT57Q9NWB7 429 aa21.42■■□□□ 1.02
EPHB4-203ENST00000467515 BABAM1Q9NWV8 329 aa21.42■■□□□ 1.02
EPHB4-203ENST00000467515 UBR2Q8IWV8 1755 aa21.41■■□□□ 1.02
EPHB4-203ENST00000467515 CHL1O00533 1208 aa21.41■■□□□ 1.02
EPHB4-203ENST00000467515 GNAI1P63096 354 aa21.41■■□□□ 1.02
EPHB4-203ENST00000467515 PIGBQ92521 554 aa21.41■■□□□ 1.02
EPHB4-203ENST00000467515 TMOD3Q9NYL9 352 aa21.41■■□□□ 1.02
EPHB4-203ENST00000467515 KCNQ2O43526 872 aa21.4■■□□□ 1.02
EPHB4-203ENST00000467515 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
EPHB4-203ENST00000467515 SLFN5Q08AF3 891 aa21.39■■□□□ 1.01
EPHB4-203ENST00000467515 BTBD11A6QL63 1104 aa21.38■■□□□ 1.01
EPHB4-203ENST00000467515 E9PSI1 815 aa21.38■■□□□ 1.01
EPHB4-203ENST00000467515 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
EPHB4-203ENST00000467515 SYTL4Q96C24 671 aaPredicted RBP21.38■■□□□ 1.01
EPHB4-203ENST00000467515 CDCA7LQ96GN5 454 aa21.38■■□□□ 1.01
EPHB4-203ENST00000467515 BCL11BQ9C0K0 894 aaPredicted RBP21.37■■□□□ 1.01
EPHB4-203ENST00000467515 MIS18AQ9NYP9 233 aa21.37■■□□□ 1.01
EPHB4-203ENST00000467515 LAS1LQ9Y4W2 734 aaKnown RBP21.37■■□□□ 1.01
EPHB4-203ENST00000467515 TNS1Q9HBL0 1735 aaKnown RBP21.37■■□□□ 1.01
EPHB4-203ENST00000467515 PTF1AQ7RTS3 328 aa21.36■■□□□ 1.01
EPHB4-203ENST00000467515 MBIPQ9NS73 344 aa21.36■■□□□ 1.01
EPHB4-203ENST00000467515 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
EPHB4-203ENST00000467515 MYH16Q9H6N6 1097 aa21.35■■□□□ 1.01
EPHB4-203ENST00000467515 LY75O60449 1722 aa21.35■■□□□ 1.01
EPHB4-203ENST00000467515 SLC39A6Q13433 755 aa21.34■■□□□ 1.01
EPHB4-203ENST00000467515 ZNF790Q6PG37 636 aa21.34■■□□□ 1.01
EPHB4-203ENST00000467515 ATG3Q9NT62 314 aa21.34■■□□□ 1.01
EPHB4-203ENST00000467515 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
EPHB4-203ENST00000467515 FANCIQ9NVI1 1328 aa21.33■■□□□ 1.01
EPHB4-203ENST00000467515 KCNQ3O43525 872 aa21.33■■□□□ 1.01
EPHB4-203ENST00000467515 TRIM37O94972 964 aa21.33■■□□□ 1.01
EPHB4-203ENST00000467515 TSR2Q969E8 191 aaKnown RBP21.33■■□□□ 1.01
EPHB4-203ENST00000467515 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
EPHB4-203ENST00000467515 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
EPHB4-203ENST00000467515 DUSP27Q5VZP5 1158 aa21.32■■□□□ 1
EPHB4-203ENST00000467515 TTC5Q8N0Z6 440 aa21.31■■□□□ 1
EPHB4-203ENST00000467515 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
EPHB4-203ENST00000467515 EP400Q96L91 3159 aa21.31■■□□□ 1
EPHB4-203ENST00000467515 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
EPHB4-203ENST00000467515 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
EPHB4-203ENST00000467515 CICQ96RK0 1608 aaPredicted RBP21.3■■□□□ 1
EPHB4-203ENST00000467515 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
EPHB4-203ENST00000467515 SMARCC1Q92922 1105 aaPredicted RBP21.3■■□□□ 1
EPHB4-203ENST00000467515 C5P01031 1676 aa21.28■■□□□ 1
EPHB4-203ENST00000467515 PALLDQ8WX93 1383 aa21.28■■□□□ 1
EPHB4-203ENST00000467515 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
EPHB4-203ENST00000467515 FMNL2Q96PY5 1086 aa21.27■■□□□ 1
EPHB4-203ENST00000467515 LAMB4A4D0S4 1761 aa21.27■■□□□ 1
EPHB4-203ENST00000467515 TJP1Q07157 1748 aa21.26■□□□□ 0.99
EPHB4-203ENST00000467515 EXOSC9Q06265 439 aaKnown RBP21.26■□□□□ 0.99
EPHB4-203ENST00000467515 TAF1LQ8IZX4 1826 aa21.26■□□□□ 0.99
EPHB4-203ENST00000467515 VSIG10Q8N0Z9 540 aa21.25■□□□□ 0.99
EPHB4-203ENST00000467515 COL5A3P25940 1745 aaPredicted RBP21.24■□□□□ 0.99
EPHB4-203ENST00000467515 PLSCR1O15162 318 aa21.24■□□□□ 0.99
EPHB4-203ENST00000467515 PTCD1O75127 700 aaKnown RBP21.24■□□□□ 0.99
EPHB4-203ENST00000467515 KRT24Q2M2I5 525 aa21.24■□□□□ 0.99
EPHB4-203ENST00000467515 C8orf58Q8NAV2 365 aa21.24■□□□□ 0.99
EPHB4-203ENST00000467515 SLC4A9Q96Q91 983 aa21.24■□□□□ 0.99
EPHB4-203ENST00000467515 CACNA1FO60840 1977 aa21.24■□□□□ 0.99
EPHB4-203ENST00000467515 GIGYF1O75420 1035 aaPredicted RBP21.23■□□□□ 0.99
EPHB4-203ENST00000467515 APBA3O96018 575 aa21.23■□□□□ 0.99
EPHB4-203ENST00000467515 ILDR2Q71H61 639 aa21.23■□□□□ 0.99
EPHB4-203ENST00000467515 RBM42Q9BTD8 480 aaKnown RBP21.23■□□□□ 0.99
EPHB4-203ENST00000467515 SOS1Q07889 1333 aaPredicted RBP21.23■□□□□ 0.99
EPHB4-203ENST00000467515 LOC102724428A0A0B4J2F2 783 aa21.22■□□□□ 0.99
EPHB4-203ENST00000467515 HOXB7P09629 217 aa21.22■□□□□ 0.99
EPHB4-203ENST00000467515 SNRPA1P09661 255 aaKnown RBP21.22■□□□□ 0.99
EPHB4-203ENST00000467515 SIK1P57059 783 aa21.22■□□□□ 0.99
EPHB4-203ENST00000467515 CCDC125Q86Z20 511 aa21.22■□□□□ 0.99
EPHB4-203ENST00000467515 TSPYL6Q8N831 410 aa21.22■□□□□ 0.99
EPHB4-203ENST00000467515 TWISTNBQ3B726 338 aaPredicted RBP21.21■□□□□ 0.99
EPHB4-203ENST00000467515 VAMP4O75379 141 aa21.2■□□□□ 0.98
EPHB4-203ENST00000467515 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
EPHB4-203ENST00000467515 PRAMEF22A3QJZ6 481 aa21.19■□□□□ 0.98
EPHB4-203ENST00000467515 ELL2O00472 640 aaPredicted RBP21.19■□□□□ 0.98
EPHB4-203ENST00000467515 TEX13AQ9BXU3 409 aaPredicted RBP21.19■□□□□ 0.98
EPHB4-203ENST00000467515 MYH14Q7Z406 1995 aaKnown RBP21.19■□□□□ 0.98
EPHB4-203ENST00000467515 ATP6V1AP38606 617 aa21.18■□□□□ 0.98
EPHB4-203ENST00000467515 RREB1Q92766 1687 aa21.18■□□□□ 0.98
EPHB4-203ENST00000467515 SF3B2Q13435 895 aaKnown RBP21.17■□□□□ 0.98
EPHB4-203ENST00000467515 ITPK1Q13572 414 aa21.17■□□□□ 0.98
EPHB4-203ENST00000467515 SLC27A3Q5K4L6 730 aa21.17■□□□□ 0.98
EPHB4-203ENST00000467515 DNAJC10Q8IXB1 793 aa21.17■□□□□ 0.98
EPHB4-203ENST00000467515 PROM2Q8N271 834 aa21.17■□□□□ 0.98
EPHB4-203ENST00000467515 CCNL1Q9UK58 526 aaPredicted RBP21.17■□□□□ 0.98
EPHB4-203ENST00000467515 USP16Q9Y5T5 823 aa21.17■□□□□ 0.98
EPHB4-203ENST00000467515 TXNRD1Q16881 649 aa21.16■□□□□ 0.98
EPHB4-203ENST00000467515 UPF1Q92900 1129 aaKnown RBP eCLIP21.16■□□□□ 0.98
EPHB4-203ENST00000467515 CAMKK2Q96RR4 588 aa21.16■□□□□ 0.98
EPHB4-203ENST00000467515 BAG6P46379 1132 aa21.15■□□□□ 0.98
EPHB4-203ENST00000467515 ZNF428Q96B54 188 aa21.15■□□□□ 0.98
EPHB4-203ENST00000467515 CYP19A1P11511 503 aaPredicted RBP21.14■□□□□ 0.97
EPHB4-203ENST00000467515 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms