RNA–Protein interactions for RNA: ENST00000467350.1

RERE-209, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-209ENST00000467350 RC3H1Q5TC82 1133 aaKnown RBP14□□□□□ -0.17
RERE-209ENST00000467350 LINC00116Q8NCU8 138 aa14□□□□□ -0.17
RERE-209ENST00000467350 DIAPH1O60610 1272 aaKnown RBP13.99□□□□□ -0.17
RERE-209ENST00000467350 ITPK1Q13572 414 aa13.99□□□□□ -0.17
RERE-209ENST00000467350 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
RERE-209ENST00000467350 CC2D1BQ5T0F9 858 aaKnown RBP13.99□□□□□ -0.17
RERE-209ENST00000467350 AEBP1Q8IUX7 1158 aa13.99□□□□□ -0.17
RERE-209ENST00000467350 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
RERE-209ENST00000467350 NFATC2IPQ8NCF5 419 aa13.99□□□□□ -0.17
RERE-209ENST00000467350 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
RERE-209ENST00000467350 NLGN2Q8NFZ4 835 aa13.98□□□□□ -0.17
RERE-209ENST00000467350 RGPD2P0DJD1 1756 aa13.98□□□□□ -0.17
RERE-209ENST00000467350 ZNF784Q8NCA9 323 aaPredicted RBP13.97□□□□□ -0.17
RERE-209ENST00000467350 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
RERE-209ENST00000467350 KDRP35968 1356 aa13.96□□□□□ -0.17
RERE-209ENST00000467350 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.17
RERE-209ENST00000467350 RFC4P35249 363 aa13.96□□□□□ -0.17
RERE-209ENST00000467350 RPS6KA4O75676 772 aa13.95□□□□□ -0.18
RERE-209ENST00000467350 HMOX1P09601 288 aa13.95□□□□□ -0.18
RERE-209ENST00000467350 LY75O60449 1722 aa13.95□□□□□ -0.18
RERE-209ENST00000467350 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
RERE-209ENST00000467350 NPC1L1Q9UHC9 1359 aa13.95□□□□□ -0.18
RERE-209ENST00000467350 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
RERE-209ENST00000467350 CNTNAP4Q9C0A0 1308 aa13.93□□□□□ -0.18
RERE-209ENST00000467350 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
RERE-209ENST00000467350 MMP10P09238 476 aa13.93□□□□□ -0.18
RERE-209ENST00000467350 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
RERE-209ENST00000467350 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
RERE-209ENST00000467350 SMIM5Q71RC9 77 aa13.93□□□□□ -0.18
RERE-209ENST00000467350 AMIGO3Q86WK7 504 aa13.93□□□□□ -0.18
RERE-209ENST00000467350 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
RERE-209ENST00000467350 SLC52A2Q9HAB3 445 aa13.93□□□□□ -0.18
RERE-209ENST00000467350 U2SURPO15042 1029 aaKnown RBP13.92□□□□□ -0.18
RERE-209ENST00000467350 TGFB2P61812 414 aa13.92□□□□□ -0.18
RERE-209ENST00000467350 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
RERE-209ENST00000467350 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
RERE-209ENST00000467350 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
RERE-209ENST00000467350 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
RERE-209ENST00000467350 YBX3P16989 372 aaKnown RBP eCLIP13.91□□□□□ -0.18
RERE-209ENST00000467350 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
RERE-209ENST00000467350 PARP3Q9Y6F1 533 aa13.91□□□□□ -0.18
RERE-209ENST00000467350 CRKLP46109 303 aaKnown RBP13.9□□□□□ -0.18
RERE-209ENST00000467350 MTHFSDQ2M296 383 aaKnown RBP13.9□□□□□ -0.18
RERE-209ENST00000467350 KDM6AO15550 1401 aaPredicted RBP13.9□□□□□ -0.19
RERE-209ENST00000467350 ZPR1O75312 459 aa13.89□□□□□ -0.19
RERE-209ENST00000467350 GAS2L2Q8NHY3 880 aa13.89□□□□□ -0.19
RERE-209ENST00000467350 CCDC87Q9NVE4 849 aa13.89□□□□□ -0.19
RERE-209ENST00000467350 C4BP0C0L5 1744 aa13.89□□□□□ -0.19
RERE-209ENST00000467350 GYS1P13807 737 aa13.88□□□□□ -0.19
RERE-209ENST00000467350 TTC5Q8N0Z6 440 aa13.88□□□□□ -0.19
RERE-209ENST00000467350 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
RERE-209ENST00000467350 C5P01031 1676 aa13.88□□□□□ -0.19
RERE-209ENST00000467350 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
RERE-209ENST00000467350 STARD3NLO95772 234 aa13.87□□□□□ -0.19
RERE-209ENST00000467350 TEFQ10587 303 aa13.87□□□□□ -0.19
RERE-209ENST00000467350 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
RERE-209ENST00000467350 INTS5Q6P9B9 1019 aaKnown RBP13.86□□□□□ -0.19
RERE-209ENST00000467350 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
RERE-209ENST00000467350 TOGARAM1Q9Y4F4 1720 aa13.86□□□□□ -0.19
RERE-209ENST00000467350 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
RERE-209ENST00000467350 C1QTNF8P60827 252 aa13.85□□□□□ -0.19
RERE-209ENST00000467350 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
RERE-209ENST00000467350 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
RERE-209ENST00000467350 NEFMP07197 916 aa13.84□□□□□ -0.19
RERE-209ENST00000467350 CYP19A1P11511 503 aaPredicted RBP13.84□□□□□ -0.19
RERE-209ENST00000467350 USP42Q9H9J4 1324 aaKnown RBP13.84□□□□□ -0.19
RERE-209ENST00000467350 A0A087WZG4 1122 aa13.83□□□□□ -0.2
RERE-209ENST00000467350 A0A0G2JLW4 131 aa13.83□□□□□ -0.2
RERE-209ENST00000467350 FCHSD2O94868 740 aa13.83□□□□□ -0.2
RERE-209ENST00000467350 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
RERE-209ENST00000467350 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.2
RERE-209ENST00000467350 RTF1Q92541 710 aaKnown RBP13.83□□□□□ -0.2
RERE-209ENST00000467350 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
RERE-209ENST00000467350 COL24A1Q17RW2 1714 aa13.83□□□□□ -0.2
RERE-209ENST00000467350 ITGB4P16144 1822 aa13.83□□□□□ -0.2
RERE-209ENST00000467350 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
RERE-209ENST00000467350 FKBP8Q14318 412 aa13.82□□□□□ -0.2
RERE-209ENST00000467350 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
RERE-209ENST00000467350 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
RERE-209ENST00000467350 GPBP1L1Q9HC44 474 aaPredicted RBP13.82□□□□□ -0.2
RERE-209ENST00000467350 PIM2Q9P1W9 311 aa13.82□□□□□ -0.2
RERE-209ENST00000467350 WWC3Q9ULE0 1092 aa13.82□□□□□ -0.2
RERE-209ENST00000467350 TM4SF1P30408 202 aa13.81□□□□□ -0.2
RERE-209ENST00000467350 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
RERE-209ENST00000467350 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
RERE-209ENST00000467350 SRP68Q9UHB9 627 aaKnown RBP13.81□□□□□ -0.2
RERE-209ENST00000467350 NARFQ9UHQ1 456 aa13.81□□□□□ -0.2
RERE-209ENST00000467350 DPEP1P16444 411 aa13.8□□□□□ -0.2
RERE-209ENST00000467350 ARHGAP27Q6ZUM4 889 aa13.8□□□□□ -0.2
RERE-209ENST00000467350 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
RERE-209ENST00000467350 PNNQ9H307 717 aaKnown RBP13.8□□□□□ -0.2
RERE-209ENST00000467350 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
RERE-209ENST00000467350 COL3A1P02461 1466 aaPredicted RBP13.8□□□□□ -0.2
RERE-209ENST00000467350 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
RERE-209ENST00000467350 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
RERE-209ENST00000467350 CANXP27824 592 aaKnown RBP13.79□□□□□ -0.2
RERE-209ENST00000467350 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
RERE-209ENST00000467350 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
RERE-209ENST00000467350 RSPH6AQ9H0K4 717 aa13.79□□□□□ -0.2
RERE-209ENST00000467350 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms