RNA–Protein interactions for RNA: ENST00000466477.5

LCLAT1-206, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-206ENST00000466477 CABP4P57796 275 aa20.34■□□□□ 0.85
LCLAT1-206ENST00000466477 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
LCLAT1-206ENST00000466477 NLGN2Q8NFZ4 835 aa20.34■□□□□ 0.85
LCLAT1-206ENST00000466477 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
LCLAT1-206ENST00000466477 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
LCLAT1-206ENST00000466477 TAF1LQ8IZX4 1826 aa20.34■□□□□ 0.85
LCLAT1-206ENST00000466477 KDRP35968 1356 aa20.34■□□□□ 0.85
LCLAT1-206ENST00000466477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.33■□□□□ 0.85
LCLAT1-206ENST00000466477 U2SURPO15042 1029 aaKnown RBP20.33■□□□□ 0.85
LCLAT1-206ENST00000466477 DIAPH1O60610 1272 aaKnown RBP20.33■□□□□ 0.85
LCLAT1-206ENST00000466477 SLC4A9Q96Q91 983 aa20.32■□□□□ 0.84
LCLAT1-206ENST00000466477 COL3A1P02461 1466 aaPredicted RBP20.31■□□□□ 0.84
LCLAT1-206ENST00000466477 PTCD1O75127 700 aaKnown RBP20.31■□□□□ 0.84
LCLAT1-206ENST00000466477 HSP90AB1P08238 724 aaKnown RBP20.31■□□□□ 0.84
LCLAT1-206ENST00000466477 ERVV-2B6SEH9 535 aa20.3■□□□□ 0.84
LCLAT1-206ENST00000466477 WWC3Q9ULE0 1092 aa20.3■□□□□ 0.84
LCLAT1-206ENST00000466477 NFATC2IPQ8NCF5 419 aa20.29■□□□□ 0.84
LCLAT1-206ENST00000466477 MTHFSDQ2M296 383 aaKnown RBP20.28■□□□□ 0.84
LCLAT1-206ENST00000466477 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
LCLAT1-206ENST00000466477 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
LCLAT1-206ENST00000466477 GPR162Q16538 588 aa20.27■□□□□ 0.84
LCLAT1-206ENST00000466477 UBR3Q6ZT12 1888 aa20.26■□□□□ 0.83
LCLAT1-206ENST00000466477 GOLGB1Q14789 3259 aaKnown RBP20.26■□□□□ 0.83
LCLAT1-206ENST00000466477 COL24A1Q17RW2 1714 aa20.25■□□□□ 0.83
LCLAT1-206ENST00000466477 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
LCLAT1-206ENST00000466477 NPC1L1Q9UHC9 1359 aa20.25■□□□□ 0.83
LCLAT1-206ENST00000466477 AKAP4Q5JQC9 854 aa20.25■□□□□ 0.83
LCLAT1-206ENST00000466477 SLC39A6Q13433 755 aa20.24■□□□□ 0.83
LCLAT1-206ENST00000466477 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
LCLAT1-206ENST00000466477 SSFA2P28290 1259 aa20.23■□□□□ 0.83
LCLAT1-206ENST00000466477 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
LCLAT1-206ENST00000466477 PPP2R1AP30153 589 aa20.21■□□□□ 0.83
LCLAT1-206ENST00000466477 RTCBQ9Y3I0 505 aaKnown RBP20.21■□□□□ 0.83
LCLAT1-206ENST00000466477 SLC52A2Q9HAB3 445 aa20.2■□□□□ 0.82
LCLAT1-206ENST00000466477 SCN11AQ9UI33 1791 aa20.2■□□□□ 0.82
LCLAT1-206ENST00000466477 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
LCLAT1-206ENST00000466477 TJP1Q07157 1748 aa20.19■□□□□ 0.82
LCLAT1-206ENST00000466477 YBX3P16989 372 aaKnown RBP eCLIP20.19■□□□□ 0.82
LCLAT1-206ENST00000466477 PRKAR2BP31323 418 aa20.18■□□□□ 0.82
LCLAT1-206ENST00000466477 CRKLP46109 303 aaKnown RBP20.18■□□□□ 0.82
LCLAT1-206ENST00000466477 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
LCLAT1-206ENST00000466477 DNAJC10Q8IXB1 793 aa20.18■□□□□ 0.82
LCLAT1-206ENST00000466477 CFAP53Q96M91 514 aa20.18■□□□□ 0.82
LCLAT1-206ENST00000466477 MRC1P22897 1456 aa20.18■□□□□ 0.82
LCLAT1-206ENST00000466477 MMP10P09238 476 aa20.17■□□□□ 0.82
LCLAT1-206ENST00000466477 ARHGEF1Q92888 912 aaKnown RBP20.17■□□□□ 0.82
LCLAT1-206ENST00000466477 SRP68Q9UHB9 627 aaKnown RBP20.17■□□□□ 0.82
LCLAT1-206ENST00000466477 CNTNAP4Q9C0A0 1308 aa20.17■□□□□ 0.82
LCLAT1-206ENST00000466477 PHACTR3Q96KR7 559 aa20.16■□□□□ 0.82
LCLAT1-206ENST00000466477 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
LCLAT1-206ENST00000466477 HMGB2P26583 209 aaKnown RBP20.15■□□□□ 0.82
LCLAT1-206ENST00000466477 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
LCLAT1-206ENST00000466477 KCPQ6ZWJ8 1503 aa20.15■□□□□ 0.82
LCLAT1-206ENST00000466477 CICQ96RK0 1608 aaPredicted RBP20.15■□□□□ 0.82
LCLAT1-206ENST00000466477 RFC4P35249 363 aa20.14■□□□□ 0.81
LCLAT1-206ENST00000466477 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
LCLAT1-206ENST00000466477 C4AP0C0L4 1744 aa20.13■□□□□ 0.81
LCLAT1-206ENST00000466477 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
LCLAT1-206ENST00000466477 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
LCLAT1-206ENST00000466477 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
LCLAT1-206ENST00000466477 GAS2L2Q8NHY3 880 aa20.12■□□□□ 0.81
LCLAT1-206ENST00000466477 ZNF831Q5JPB2 1677 aa20.12■□□□□ 0.81
LCLAT1-206ENST00000466477 ADAMTS7Q9UKP4 1686 aa20.11■□□□□ 0.81
LCLAT1-206ENST00000466477 GNAT3A8MTJ3 354 aa20.11■□□□□ 0.81
LCLAT1-206ENST00000466477 GYS1P13807 737 aa20.11■□□□□ 0.81
LCLAT1-206ENST00000466477 TEFQ10587 303 aa20.11■□□□□ 0.81
LCLAT1-206ENST00000466477 INTS5Q6P9B9 1019 aaKnown RBP20.11■□□□□ 0.81
LCLAT1-206ENST00000466477 ZNF784Q8NCA9 323 aaPredicted RBP20.11■□□□□ 0.81
LCLAT1-206ENST00000466477 CD2APQ9Y5K6 639 aa20.11■□□□□ 0.81
LCLAT1-206ENST00000466477 VIRMAQ69YN4 1812 aaKnown RBP20.11■□□□□ 0.81
LCLAT1-206ENST00000466477 MYH14Q7Z406 1995 aaKnown RBP20.1■□□□□ 0.81
LCLAT1-206ENST00000466477 NUDCQ9Y266 331 aa20.1■□□□□ 0.81
LCLAT1-206ENST00000466477 ZBTB1Q9Y2K1 713 aa20.1■□□□□ 0.81
LCLAT1-206ENST00000466477 FKBP8Q14318 412 aa20.09■□□□□ 0.81
LCLAT1-206ENST00000466477 TTC5Q8N0Z6 440 aa20.09■□□□□ 0.81
LCLAT1-206ENST00000466477 CCDC87Q9NVE4 849 aa20.09■□□□□ 0.81
LCLAT1-206ENST00000466477 ADRA2BP18089 450 aa20.08■□□□□ 0.81
LCLAT1-206ENST00000466477 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.81
LCLAT1-206ENST00000466477 DCTN1Q14203 1278 aa20.08■□□□□ 0.81
LCLAT1-206ENST00000466477 MCM10Q7L590 875 aa20.08■□□□□ 0.81
LCLAT1-206ENST00000466477 ZNF330Q9Y3S2 320 aaPredicted RBP20.08■□□□□ 0.81
LCLAT1-206ENST00000466477 USP42Q9H9J4 1324 aaKnown RBP20.07■□□□□ 0.8
LCLAT1-206ENST00000466477 KCNQ3O43525 872 aa20.07■□□□□ 0.8
LCLAT1-206ENST00000466477 CYP19A1P11511 503 aaPredicted RBP20.07■□□□□ 0.8
LCLAT1-206ENST00000466477 SOS1Q07889 1333 aaPredicted RBP20.06■□□□□ 0.8
LCLAT1-206ENST00000466477 USPL1Q5W0Q7 1092 aa20.06■□□□□ 0.8
LCLAT1-206ENST00000466477 NLGN1Q8N2Q7 840 aa20.06■□□□□ 0.8
LCLAT1-206ENST00000466477 ZNF496Q96IT1 587 aaPredicted RBP20.06■□□□□ 0.8
LCLAT1-206ENST00000466477 PXDNLA1KZ92 1463 aa20.05■□□□□ 0.8
LCLAT1-206ENST00000466477 DDR1Q08345 913 aa20.05■□□□□ 0.8
LCLAT1-206ENST00000466477 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
LCLAT1-206ENST00000466477 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
LCLAT1-206ENST00000466477 COL15A1P39059 1388 aa20.05■□□□□ 0.8
LCLAT1-206ENST00000466477 C10orf71Q711Q0 1435 aa20.04■□□□□ 0.8
LCLAT1-206ENST00000466477 A0A0G2JLW4 131 aa20.04■□□□□ 0.8
LCLAT1-206ENST00000466477 UBR2Q8IWV8 1755 aa20.03■□□□□ 0.8
LCLAT1-206ENST00000466477 PIP4K2AP48426 406 aaPredicted RBP20.03■□□□□ 0.8
LCLAT1-206ENST00000466477 ZNF790Q6PG37 636 aa20.03■□□□□ 0.8
LCLAT1-206ENST00000466477 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
LCLAT1-206ENST00000466477 GRIN3BO60391 1043 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms