RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
SRSF4-202ENST00000466448 KDRP35968 1356 aa25.92■■□□□ 1.74
SRSF4-202ENST00000466448 WWC3Q9ULE0 1092 aa25.91■■□□□ 1.74
SRSF4-202ENST00000466448 PANK3Q9H999 370 aa25.9■■□□□ 1.74
SRSF4-202ENST00000466448 EIF4G2P78344 907 aaKnown RBP eCLIP25.89■■□□□ 1.74
SRSF4-202ENST00000466448 ADCY9O60503 1353 aa25.89■■□□□ 1.74
SRSF4-202ENST00000466448 ERVV-2B6SEH9 535 aa25.88■■□□□ 1.73
SRSF4-202ENST00000466448 HSPA5P11021 654 aaKnown RBP25.88■■□□□ 1.73
SRSF4-202ENST00000466448 DCAF5Q96JK2 942 aa25.88■■□□□ 1.73
SRSF4-202ENST00000466448 SLC4A9Q96Q91 983 aa25.88■■□□□ 1.73
SRSF4-202ENST00000466448 MMP10P09238 476 aa25.86■■□□□ 1.73
SRSF4-202ENST00000466448 HSP90AB1P08238 724 aaKnown RBP25.85■■□□□ 1.73
SRSF4-202ENST00000466448 PLEKHO1Q53GL0 409 aaPredicted RBP25.85■■□□□ 1.73
SRSF4-202ENST00000466448 RBM42Q9BTD8 480 aaKnown RBP25.85■■□□□ 1.73
SRSF4-202ENST00000466448 GPBP1L1Q9HC44 474 aaPredicted RBP25.85■■□□□ 1.73
SRSF4-202ENST00000466448 KDM6AO15550 1401 aaPredicted RBP25.85■■□□□ 1.73
SRSF4-202ENST00000466448 RTCBQ9Y3I0 505 aaKnown RBP25.84■■□□□ 1.73
SRSF4-202ENST00000466448 TRAPPC3LQ5T215 181 aa25.83■■□□□ 1.73
SRSF4-202ENST00000466448 ZNF530Q6P9A1 599 aaPredicted RBP25.83■■□□□ 1.73
SRSF4-202ENST00000466448 AMOTQ4VCS5 1084 aa25.82■■□□□ 1.72
SRSF4-202ENST00000466448 AEBP1Q8IUX7 1158 aa25.82■■□□□ 1.72
SRSF4-202ENST00000466448 ZNF526Q8TF50 670 aaPredicted RBP25.82■■□□□ 1.72
SRSF4-202ENST00000466448 ZNF831Q5JPB2 1677 aa25.81■■□□□ 1.72
SRSF4-202ENST00000466448 CABP4P57796 275 aa25.81■■□□□ 1.72
SRSF4-202ENST00000466448 PXDNLA1KZ92 1463 aa25.8■■□□□ 1.72
SRSF4-202ENST00000466448 RC3H1Q5TC82 1133 aaKnown RBP25.8■■□□□ 1.72
SRSF4-202ENST00000466448 MORC1Q86VD1 984 aa25.8■■□□□ 1.72
SRSF4-202ENST00000466448 NLGN1Q8N2Q7 840 aa25.8■■□□□ 1.72
SRSF4-202ENST00000466448 ARHGEF1Q92888 912 aaKnown RBP25.8■■□□□ 1.72
SRSF4-202ENST00000466448 CNTNAP4Q9C0A0 1308 aa25.8■■□□□ 1.72
SRSF4-202ENST00000466448 CICQ96RK0 1608 aaPredicted RBP25.8■■□□□ 1.72
SRSF4-202ENST00000466448 CEP350Q5VT06 3117 aa25.79■■□□□ 1.72
SRSF4-202ENST00000466448 ADRA2BP18089 450 aa25.79■■□□□ 1.72
SRSF4-202ENST00000466448 MTHFSP49914 203 aa25.78■■□□□ 1.72
SRSF4-202ENST00000466448 RPS6KA4O75676 772 aa25.77■■□□□ 1.72
SRSF4-202ENST00000466448 C10orf71Q711Q0 1435 aa25.77■■□□□ 1.72
SRSF4-202ENST00000466448 COL5A3P25940 1745 aaPredicted RBP25.77■■□□□ 1.72
SRSF4-202ENST00000466448 GYS1P13807 737 aa25.76■■□□□ 1.71
SRSF4-202ENST00000466448 C1orf141Q5JVX7 400 aa25.76■■□□□ 1.71
SRSF4-202ENST00000466448 PTCD1O75127 700 aaKnown RBP25.75■■□□□ 1.71
SRSF4-202ENST00000466448 RFC4P35249 363 aa25.75■■□□□ 1.71
SRSF4-202ENST00000466448 TGFB2P61812 414 aa25.75■■□□□ 1.71
SRSF4-202ENST00000466448 SULT6B1Q6IMI4 303 aa25.75■■□□□ 1.71
SRSF4-202ENST00000466448 KIAA1551Q9HCM1 1747 aa25.74■■□□□ 1.71
SRSF4-202ENST00000466448 A0A0G2JLW4 131 aa25.74■■□□□ 1.71
SRSF4-202ENST00000466448 NFATC2IPQ8NCF5 419 aa25.74■■□□□ 1.71
SRSF4-202ENST00000466448 KIF13BQ9NQT8 1826 aa25.73■■□□□ 1.71
SRSF4-202ENST00000466448 KNSTRNQ9Y448 316 aa25.73■■□□□ 1.71
SRSF4-202ENST00000466448 IL13P35225 146 aa25.72■■□□□ 1.71
SRSF4-202ENST00000466448 C4AP0C0L4 1744 aa25.71■■□□□ 1.71
SRSF4-202ENST00000466448 CRKLP46109 303 aaKnown RBP25.71■■□□□ 1.71
SRSF4-202ENST00000466448 CCDC87Q9NVE4 849 aa25.71■■□□□ 1.71
SRSF4-202ENST00000466448 BCS1LQ9Y276 419 aa25.71■■□□□ 1.71
SRSF4-202ENST00000466448 PARP3Q9Y6F1 533 aa25.7■■□□□ 1.7
SRSF4-202ENST00000466448 DPEP1P16444 411 aa25.69■■□□□ 1.7
SRSF4-202ENST00000466448 N4BP2Q86UW6 1770 aaPredicted RBP25.68■■□□□ 1.7
SRSF4-202ENST00000466448 KIF3CO14782 793 aa25.67■■□□□ 1.7
SRSF4-202ENST00000466448 HSPA6P17066 643 aa25.67■■□□□ 1.7
SRSF4-202ENST00000466448 AMER1Q5JTC6 1135 aaPredicted RBP25.67■■□□□ 1.7
SRSF4-202ENST00000466448 CCER1Q8TC90 406 aaPredicted RBP25.67■■□□□ 1.7
SRSF4-202ENST00000466448 SRP68Q9UHB9 627 aaKnown RBP25.67■■□□□ 1.7
SRSF4-202ENST00000466448 TJP1Q07157 1748 aa25.66■■□□□ 1.7
SRSF4-202ENST00000466448 USP42Q9H9J4 1324 aaKnown RBP25.65■■□□□ 1.7
SRSF4-202ENST00000466448 FKBP8Q14318 412 aa25.65■■□□□ 1.7
SRSF4-202ENST00000466448 MYH14Q7Z406 1995 aaKnown RBP25.65■■□□□ 1.7
SRSF4-202ENST00000466448 FCHSD2O94868 740 aa25.64■■□□□ 1.7
SRSF4-202ENST00000466448 AKAP4Q5JQC9 854 aa25.64■■□□□ 1.7
SRSF4-202ENST00000466448 INTS5Q6P9B9 1019 aaKnown RBP25.64■■□□□ 1.7
SRSF4-202ENST00000466448 ARHGAP27Q6ZUM4 889 aa25.64■■□□□ 1.7
SRSF4-202ENST00000466448 KCNA3P22001 575 aa25.63■■□□□ 1.69
SRSF4-202ENST00000466448 DDR1Q08345 913 aa25.62■■□□□ 1.69
SRSF4-202ENST00000466448 SLC52A2Q9HAB3 445 aa25.62■■□□□ 1.69
SRSF4-202ENST00000466448 LGR6Q9HBX8 967 aa25.62■■□□□ 1.69
SRSF4-202ENST00000466448 KIF7Q2M1P5 1343 aa25.61■■□□□ 1.69
SRSF4-202ENST00000466448 SCN11AQ9UI33 1791 aa25.6■■□□□ 1.69
SRSF4-202ENST00000466448 DNAJC10Q8IXB1 793 aa25.6■■□□□ 1.69
SRSF4-202ENST00000466448 HMOX1P09601 288 aa25.59■■□□□ 1.69
SRSF4-202ENST00000466448 MRC1P22897 1456 aa25.59■■□□□ 1.69
SRSF4-202ENST00000466448 ADAMTS7Q9UKP4 1686 aa25.58■■□□□ 1.69
SRSF4-202ENST00000466448 PIM2Q9P1W9 311 aa25.58■■□□□ 1.69
SRSF4-202ENST00000466448 RNMTO43148 476 aaKnown RBP25.57■■□□□ 1.68
SRSF4-202ENST00000466448 BRCA1P38398 1863 aaKnown RBP25.57■■□□□ 1.68
SRSF4-202ENST00000466448 POLRMTO00411 1230 aaKnown RBP25.56■■□□□ 1.68
SRSF4-202ENST00000466448 TM4SF1P30408 202 aa25.56■■□□□ 1.68
SRSF4-202ENST00000466448 SLC39A6Q13433 755 aa25.56■■□□□ 1.68
SRSF4-202ENST00000466448 SOS1Q07889 1333 aaPredicted RBP25.56■■□□□ 1.68
SRSF4-202ENST00000466448 KCPQ6ZWJ8 1503 aa25.55■■□□□ 1.68
SRSF4-202ENST00000466448 CYP19A1P11511 503 aaPredicted RBP25.55■■□□□ 1.68
SRSF4-202ENST00000466448 MTHFSDQ2M296 383 aaKnown RBP25.55■■□□□ 1.68
SRSF4-202ENST00000466448 DALRD3Q5D0E6 543 aaKnown RBP25.55■■□□□ 1.68
SRSF4-202ENST00000466448 USPL1Q5W0Q7 1092 aa25.55■■□□□ 1.68
SRSF4-202ENST00000466448 PER1O15534 1290 aaPredicted RBP25.54■■□□□ 1.68
SRSF4-202ENST00000466448 ZPR1O75312 459 aa25.54■■□□□ 1.68
SRSF4-202ENST00000466448 CHRNA5P30532 468 aa25.54■■□□□ 1.68
SRSF4-202ENST00000466448 C9orf131Q5VYM1 1079 aa25.54■■□□□ 1.68
SRSF4-202ENST00000466448 NMRK2Q9NPI5 230 aa25.54■■□□□ 1.68
SRSF4-202ENST00000466448 TOMM70O94826 608 aa25.53■■□□□ 1.68
SRSF4-202ENST00000466448 DIAPH1O60610 1272 aaKnown RBP25.52■■□□□ 1.68
SRSF4-202ENST00000466448 CC2D1BQ5T0F9 858 aaKnown RBP25.52■■□□□ 1.68
SRSF4-202ENST00000466448 IFFO2Q5TF58 517 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms