RNA–Protein interactions for RNA: ENST00000465864.1

KDM1A-203, Transcript of lysine demethylase 1A, humanhuman

TSL 5

Gene KDM1A, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-203ENST00000465864 MCM10Q7L590 875 aa11.01□□□□□ -0.65
KDM1A-203ENST00000465864 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
KDM1A-203ENST00000465864 RRP7AQ9Y3A4 280 aaKnown RBP11.01□□□□□ -0.65
KDM1A-203ENST00000465864 MAP3K5Q99683 1374 aa11.01□□□□□ -0.65
KDM1A-203ENST00000465864 TUBGCP6Q96RT7 1819 aa11□□□□□ -0.65
KDM1A-203ENST00000465864 KCNQ3O43525 872 aa11□□□□□ -0.65
KDM1A-203ENST00000465864 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
KDM1A-203ENST00000465864 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
KDM1A-203ENST00000465864 MIER1Q8N108 512 aa11□□□□□ -0.65
KDM1A-203ENST00000465864 GAS2L2Q8NHY3 880 aa11□□□□□ -0.65
KDM1A-203ENST00000465864 PDGFDQ9GZP0 370 aaPredicted RBP11□□□□□ -0.65
KDM1A-203ENST00000465864 SLC52A2Q9HAB3 445 aa11□□□□□ -0.65
KDM1A-203ENST00000465864 MRS2Q9HD23 443 aa11□□□□□ -0.65
KDM1A-203ENST00000465864 TMOD3Q9NYL9 352 aa11□□□□□ -0.65
KDM1A-203ENST00000465864 MRC1P22897 1456 aa11□□□□□ -0.65
KDM1A-203ENST00000465864 PAPPAQ13219 1627 aa10.99□□□□□ -0.65
KDM1A-203ENST00000465864 PSDA5PKW4 1024 aaPredicted RBP10.99□□□□□ -0.65
KDM1A-203ENST00000465864 ITPK1Q13572 414 aa10.99□□□□□ -0.65
KDM1A-203ENST00000465864 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.65
KDM1A-203ENST00000465864 NFE2L2Q16236 605 aa10.99□□□□□ -0.65
KDM1A-203ENST00000465864 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
KDM1A-203ENST00000465864 CEMIPQ8WUJ3 1361 aa10.99□□□□□ -0.65
KDM1A-203ENST00000465864 PALLDQ8WX93 1383 aa10.99□□□□□ -0.65
KDM1A-203ENST00000465864 MYH14Q7Z406 1995 aaKnown RBP10.99□□□□□ -0.65
KDM1A-203ENST00000465864 R3HDM1Q15032 1099 aaKnown RBP10.98□□□□□ -0.65
KDM1A-203ENST00000465864 NEUROD2Q15784 382 aa10.98□□□□□ -0.65
KDM1A-203ENST00000465864 ZNF827Q17R98 1081 aa10.98□□□□□ -0.65
KDM1A-203ENST00000465864 AMIGO3Q86WK7 504 aa10.98□□□□□ -0.65
KDM1A-203ENST00000465864 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
KDM1A-203ENST00000465864 MIS18AQ9NYP9 233 aa10.98□□□□□ -0.65
KDM1A-203ENST00000465864 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
KDM1A-203ENST00000465864 APAF1O14727 1248 aa10.97□□□□□ -0.65
KDM1A-203ENST00000465864 PTCD1O75127 700 aaKnown RBP10.97□□□□□ -0.65
KDM1A-203ENST00000465864 RIPK4P57078 832 aa10.97□□□□□ -0.65
KDM1A-203ENST00000465864 C5P01031 1676 aa10.97□□□□□ -0.65
KDM1A-203ENST00000465864 TJP1Q07157 1748 aa10.97□□□□□ -0.65
KDM1A-203ENST00000465864 UBR2Q8IWV8 1755 aa10.97□□□□□ -0.65
KDM1A-203ENST00000465864 KCPQ6ZWJ8 1503 aa10.96□□□□□ -0.65
KDM1A-203ENST00000465864 LOC102724428A0A0B4J2F2 783 aa10.96□□□□□ -0.65
KDM1A-203ENST00000465864 SIK1P57059 783 aa10.96□□□□□ -0.65
KDM1A-203ENST00000465864 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
KDM1A-203ENST00000465864 LINC00116Q8NCU8 138 aa10.96□□□□□ -0.65
KDM1A-203ENST00000465864 AKT1S1Q96B36 256 aa10.96□□□□□ -0.65
KDM1A-203ENST00000465864 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
KDM1A-203ENST00000465864 CCNL1Q9UK58 526 aaPredicted RBP10.96□□□□□ -0.65
KDM1A-203ENST00000465864 COL5A3P25940 1745 aaPredicted RBP10.95□□□□□ -0.66
KDM1A-203ENST00000465864 HTATSF1O43719 755 aaKnown RBP10.95□□□□□ -0.66
KDM1A-203ENST00000465864 SMARCC1Q92922 1105 aaPredicted RBP10.95□□□□□ -0.66
KDM1A-203ENST00000465864 UBR3Q6ZT12 1888 aa10.94□□□□□ -0.66
KDM1A-203ENST00000465864 MAPK8IP3Q9UPT6 1336 aa10.94□□□□□ -0.66
KDM1A-203ENST00000465864 PRAMEF22A3QJZ6 481 aa10.94□□□□□ -0.66
KDM1A-203ENST00000465864 SLC15A2Q16348 729 aa10.94□□□□□ -0.66
KDM1A-203ENST00000465864 SLC27A3Q5K4L6 730 aa10.94□□□□□ -0.66
KDM1A-203ENST00000465864 PNNQ9H307 717 aaKnown RBP10.94□□□□□ -0.66
KDM1A-203ENST00000465864 KDM3BQ7LBC6 1761 aa10.94□□□□□ -0.66
KDM1A-203ENST00000465864 C4BP0C0L5 1744 aa10.94□□□□□ -0.66
KDM1A-203ENST00000465864 ZNF831Q5JPB2 1677 aa10.94□□□□□ -0.66
KDM1A-203ENST00000465864 CASZ1Q86V15 1759 aa10.93□□□□□ -0.66
KDM1A-203ENST00000465864 ATP6V1AP38606 617 aa10.93□□□□□ -0.66
KDM1A-203ENST00000465864 TEFQ10587 303 aa10.93□□□□□ -0.66
KDM1A-203ENST00000465864 TAF7Q15545 349 aaPredicted RBP10.93□□□□□ -0.66
KDM1A-203ENST00000465864 ZNF790Q6PG37 636 aa10.93□□□□□ -0.66
KDM1A-203ENST00000465864 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
KDM1A-203ENST00000465864 ZNF496Q96IT1 587 aaPredicted RBP10.93□□□□□ -0.66
KDM1A-203ENST00000465864 BTBD11A6QL63 1104 aa10.92□□□□□ -0.66
KDM1A-203ENST00000465864 DNAJC10Q8IXB1 793 aa10.92□□□□□ -0.66
KDM1A-203ENST00000465864 SALL2Q9Y467 1007 aaPredicted RBP10.92□□□□□ -0.66
KDM1A-203ENST00000465864 QSER1Q2KHR3 1735 aa10.92□□□□□ -0.66
KDM1A-203ENST00000465864 NEFMP07197 916 aa10.91□□□□□ -0.66
KDM1A-203ENST00000465864 NBPF14Q5TI25 921 aa10.91□□□□□ -0.66
KDM1A-203ENST00000465864 CICQ96RK0 1608 aaPredicted RBP10.91□□□□□ -0.66
KDM1A-203ENST00000465864 PNPLA7Q6ZV29 1317 aa10.9□□□□□ -0.66
KDM1A-203ENST00000465864 CCER2I3L3R5 266 aa10.9□□□□□ -0.66
KDM1A-203ENST00000465864 CYP19A1P11511 503 aaPredicted RBP10.9□□□□□ -0.66
KDM1A-203ENST00000465864 KRT24Q2M2I5 525 aa10.9□□□□□ -0.66
KDM1A-203ENST00000465864 INTS5Q6P9B9 1019 aaKnown RBP10.9□□□□□ -0.66
KDM1A-203ENST00000465864 COL23A1Q86Y22 540 aaPredicted RBP10.9□□□□□ -0.66
KDM1A-203ENST00000465864 STK32BQ9NY57 414 aa10.9□□□□□ -0.66
KDM1A-203ENST00000465864 USP16Q9Y5T5 823 aa10.9□□□□□ -0.66
KDM1A-203ENST00000465864 EIF4A1P60842 406 aaKnown RBP10.89□□□□□ -0.67
KDM1A-203ENST00000465864 HEG1Q9ULI3 1381 aa10.89□□□□□ -0.67
KDM1A-203ENST00000465864 CHL1O00533 1208 aa10.88□□□□□ -0.67
KDM1A-203ENST00000465864 A1BGP04217 495 aa10.88□□□□□ -0.67
KDM1A-203ENST00000465864 ZNF853P0CG23 659 aa10.88□□□□□ -0.67
KDM1A-203ENST00000465864 CRKLP46109 303 aaKnown RBP10.88□□□□□ -0.67
KDM1A-203ENST00000465864 PIP4K2AP48426 406 aaPredicted RBP10.88□□□□□ -0.67
KDM1A-203ENST00000465864 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
KDM1A-203ENST00000465864 TFCP2L1Q9NZI6 479 aa10.88□□□□□ -0.67
KDM1A-203ENST00000465864 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
KDM1A-203ENST00000465864 PHF14O94880 888 aa10.87□□□□□ -0.67
KDM1A-203ENST00000465864 ZBTB7AO95365 584 aa10.87□□□□□ -0.67
KDM1A-203ENST00000465864 RC3H1Q5TC82 1133 aaKnown RBP10.87□□□□□ -0.67
KDM1A-203ENST00000465864 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
KDM1A-203ENST00000465864 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
KDM1A-203ENST00000465864 C4AP0C0L4 1744 aa10.87□□□□□ -0.67
KDM1A-203ENST00000465864 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
KDM1A-203ENST00000465864 GNPATO15228 680 aa10.86□□□□□ -0.67
KDM1A-203ENST00000465864 TTC5Q8N0Z6 440 aa10.86□□□□□ -0.67
KDM1A-203ENST00000465864 FMNL2Q96PY5 1086 aa10.86□□□□□ -0.67
KDM1A-203ENST00000465864 TSPYL4Q9UJ04 414 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms