RNA–Protein interactions for RNA: ENST00000465669.1

RAPH1-212, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

TSL 2

Gene RAPH1, Length 360 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-212ENST00000465669 TFCP2L1Q9NZI6 479 aa30.67■■■□□ 2.5
RAPH1-212ENST00000465669 ATP6V1AP38606 617 aa30.66■■■□□ 2.5
RAPH1-212ENST00000465669 IL17REQ8NFR9 667 aa30.66■■■□□ 2.5
RAPH1-212ENST00000465669 NEFMP07197 916 aa30.65■■■□□ 2.5
RAPH1-212ENST00000465669 PTCD1O75127 700 aaKnown RBP30.63■■■□□ 2.49
RAPH1-212ENST00000465669 ITPK1Q13572 414 aa30.63■■■□□ 2.49
RAPH1-212ENST00000465669 VIRMAQ69YN4 1812 aaKnown RBP30.63■■■□□ 2.49
RAPH1-212ENST00000465669 ZBTB7AO95365 584 aa30.62■■■□□ 2.49
RAPH1-212ENST00000465669 SLC39A6Q13433 755 aa30.62■■■□□ 2.49
RAPH1-212ENST00000465669 PLEKHF1Q96S99 279 aa30.62■■■□□ 2.49
RAPH1-212ENST00000465669 C5P01031 1676 aa30.62■■■□□ 2.49
RAPH1-212ENST00000465669 LINC00116Q8NCU8 138 aa30.61■■■□□ 2.49
RAPH1-212ENST00000465669 SLC4A9Q96Q91 983 aa30.61■■■□□ 2.49
RAPH1-212ENST00000465669 MRC1P22897 1456 aa30.6■■■□□ 2.49
RAPH1-212ENST00000465669 TEFQ10587 303 aa30.6■■■□□ 2.49
RAPH1-212ENST00000465669 PNNQ9H307 717 aaKnown RBP30.6■■■□□ 2.49
RAPH1-212ENST00000465669 CASZ1Q86V15 1759 aa30.59■■■□□ 2.49
RAPH1-212ENST00000465669 ADAMTS7Q9UKP4 1686 aa30.59■■■□□ 2.49
RAPH1-212ENST00000465669 PNPLA7Q6ZV29 1317 aa30.59■■■□□ 2.49
RAPH1-212ENST00000465669 MAPK8IP3Q9UPT6 1336 aa30.59■■■□□ 2.49
RAPH1-212ENST00000465669 WDR43Q15061 677 aaKnown RBP eCLIP30.59■■■□□ 2.49
RAPH1-212ENST00000465669 RTF1Q92541 710 aaKnown RBP30.59■■■□□ 2.49
RAPH1-212ENST00000465669 TAF1LQ8IZX4 1826 aa30.59■■■□□ 2.49
RAPH1-212ENST00000465669 MCM10Q7L590 875 aa30.58■■■□□ 2.49
RAPH1-212ENST00000465669 AK7Q96M32 723 aa30.58■■■□□ 2.49
RAPH1-212ENST00000465669 SPON1Q9HCB6 807 aa30.58■■■□□ 2.49
RAPH1-212ENST00000465669 ATF5Q9Y2D1 282 aaPredicted RBP30.58■■■□□ 2.49
RAPH1-212ENST00000465669 SRCAPQ6ZRS2 3230 aa30.58■■■□□ 2.49
RAPH1-212ENST00000465669 MSH5O43196 834 aa30.57■■■□□ 2.48
RAPH1-212ENST00000465669 ANP32CO43423 234 aa30.57■■■□□ 2.48
RAPH1-212ENST00000465669 HMGB2P26583 209 aaKnown RBP30.57■■■□□ 2.48
RAPH1-212ENST00000465669 DCTN1Q14203 1278 aa30.57■■■□□ 2.48
RAPH1-212ENST00000465669 TUBGCP6Q96RT7 1819 aa30.55■■■□□ 2.48
RAPH1-212ENST00000465669 SMIM5Q71RC9 77 aa30.55■■■□□ 2.48
RAPH1-212ENST00000465669 CCDC146Q8IYE0 955 aa30.55■■■□□ 2.48
RAPH1-212ENST00000465669 C4BP0C0L5 1744 aa30.55■■■□□ 2.48
RAPH1-212ENST00000465669 LRP5O75197 1615 aa30.55■■■□□ 2.48
RAPH1-212ENST00000465669 NFE2L2Q16236 605 aa30.54■■■□□ 2.48
RAPH1-212ENST00000465669 COL23A1Q86Y22 540 aaPredicted RBP30.53■■■□□ 2.48
RAPH1-212ENST00000465669 CEMIPQ8WUJ3 1361 aa30.53■■■□□ 2.48
RAPH1-212ENST00000465669 PHF14O94880 888 aa30.52■■■□□ 2.48
RAPH1-212ENST00000465669 CCDC184Q52MB2 194 aa30.52■■■□□ 2.48
RAPH1-212ENST00000465669 ADAMTS8Q9UP79 889 aa30.52■■■□□ 2.48
RAPH1-212ENST00000465669 AMIGO3Q86WK7 504 aa30.51■■■□□ 2.47
RAPH1-212ENST00000465669 GNPATO15228 680 aa30.5■■■□□ 2.47
RAPH1-212ENST00000465669 HTATSF1O43719 755 aaKnown RBP30.5■■■□□ 2.47
RAPH1-212ENST00000465669 TTC5Q8N0Z6 440 aa30.5■■■□□ 2.47
RAPH1-212ENST00000465669 MTFR1LQ9H019 292 aa30.5■■■□□ 2.47
RAPH1-212ENST00000465669 QSER1Q2KHR3 1735 aa30.49■■■□□ 2.47
RAPH1-212ENST00000465669 BTBD11A6QL63 1104 aa30.48■■■□□ 2.47
RAPH1-212ENST00000465669 DNAJC10Q8IXB1 793 aa30.48■■■□□ 2.47
RAPH1-212ENST00000465669 PPP1R1BQ9UD71 204 aaPredicted RBP30.47■■■□□ 2.47
RAPH1-212ENST00000465669 DLG5Q8TDM6 1919 aa30.46■■■□□ 2.47
RAPH1-212ENST00000465669 KCNQ3O43525 872 aa30.46■■■□□ 2.47
RAPH1-212ENST00000465669 THUMPD2Q9BTF0 503 aaKnown RBP30.46■■■□□ 2.47
RAPH1-212ENST00000465669 RRP7AQ9Y3A4 280 aaKnown RBP30.46■■■□□ 2.47
RAPH1-212ENST00000465669 KCPQ6ZWJ8 1503 aa30.46■■■□□ 2.47
RAPH1-212ENST00000465669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.45■■■□□ 2.47
RAPH1-212ENST00000465669 RIPK4P57078 832 aa30.45■■■□□ 2.47
RAPH1-212ENST00000465669 ZNF790Q6PG37 636 aa30.45■■■□□ 2.47
RAPH1-212ENST00000465669 FLAD1Q8NFF5 587 aa30.45■■■□□ 2.47
RAPH1-212ENST00000465669 SLC16A10Q8TF71 515 aa30.45■■■□□ 2.47
RAPH1-212ENST00000465669 RUNDC1Q96C34 613 aa30.45■■■□□ 2.47
RAPH1-212ENST00000465669 SIPA1L3O60292 1781 aaPredicted RBP30.45■■■□□ 2.46
RAPH1-212ENST00000465669 ZNF831Q5JPB2 1677 aa30.44■■■□□ 2.46
RAPH1-212ENST00000465669 PTGER2P43116 358 aa30.44■■■□□ 2.46
RAPH1-212ENST00000465669 NEUROD2Q15784 382 aa30.44■■■□□ 2.46
RAPH1-212ENST00000465669 TMPOP42166 694 aaKnown RBP30.43■■■□□ 2.46
RAPH1-212ENST00000465669 CRKLP46109 303 aaKnown RBP30.43■■■□□ 2.46
RAPH1-212ENST00000465669 ZNF496Q96IT1 587 aaPredicted RBP30.43■■■□□ 2.46
RAPH1-212ENST00000465669 CNTNAP4Q9C0A0 1308 aa30.43■■■□□ 2.46
RAPH1-212ENST00000465669 UBR3Q6ZT12 1888 aa30.42■■■□□ 2.46
RAPH1-212ENST00000465669 TJP1Q07157 1748 aa30.42■■■□□ 2.46
RAPH1-212ENST00000465669 SSFA2P28290 1259 aa30.42■■■□□ 2.46
RAPH1-212ENST00000465669 RC3H1Q5TC82 1133 aaKnown RBP30.42■■■□□ 2.46
RAPH1-212ENST00000465669 MSL1Q68DK7 614 aa30.42■■■□□ 2.46
RAPH1-212ENST00000465669 RTCBQ9Y3I0 505 aaKnown RBP30.42■■■□□ 2.46
RAPH1-212ENST00000465669 MRS2Q9HD23 443 aa30.41■■■□□ 2.46
RAPH1-212ENST00000465669 MIS18AQ9NYP9 233 aa30.41■■■□□ 2.46
RAPH1-212ENST00000465669 COL5A3P25940 1745 aaPredicted RBP30.41■■■□□ 2.46
RAPH1-212ENST00000465669 TAF7Q15545 349 aaPredicted RBP30.4■■■□□ 2.46
RAPH1-212ENST00000465669 RPS6KA4O75676 772 aa30.38■■■□□ 2.45
RAPH1-212ENST00000465669 VSIG10Q8N0Z9 540 aa30.38■■■□□ 2.45
RAPH1-212ENST00000465669 FMNL2Q96PY5 1086 aa30.38■■■□□ 2.45
RAPH1-212ENST00000465669 SGIP1Q9BQI5 828 aa30.38■■■□□ 2.45
RAPH1-212ENST00000465669 UBR2Q8IWV8 1755 aa30.38■■■□□ 2.45
RAPH1-212ENST00000465669 MYH14Q7Z406 1995 aaKnown RBP30.37■■■□□ 2.45
RAPH1-212ENST00000465669 CYP19A1P11511 503 aaPredicted RBP30.37■■■□□ 2.45
RAPH1-212ENST00000465669 TRAPPC3LQ5T215 181 aa30.37■■■□□ 2.45
RAPH1-212ENST00000465669 HEG1Q9ULI3 1381 aa30.37■■■□□ 2.45
RAPH1-212ENST00000465669 INTS5Q6P9B9 1019 aaKnown RBP30.36■■■□□ 2.45
RAPH1-212ENST00000465669 CCDC87Q9NVE4 849 aa30.36■■■□□ 2.45
RAPH1-212ENST00000465669 POLD1P28340 1107 aa30.35■■■□□ 2.45
RAPH1-212ENST00000465669 LMOD3Q0VAK6 560 aa30.34■■■□□ 2.45
RAPH1-212ENST00000465669 ARHGEF1Q92888 912 aaKnown RBP30.34■■■□□ 2.45
RAPH1-212ENST00000465669 CICQ96RK0 1608 aaPredicted RBP30.33■■■□□ 2.45
RAPH1-212ENST00000465669 ARXQ96QS3 562 aa30.33■■■□□ 2.45
RAPH1-212ENST00000465669 APAF1O14727 1248 aa30.31■■■□□ 2.44
RAPH1-212ENST00000465669 STARD3NLO95772 234 aa30.31■■■□□ 2.44
RAPH1-212ENST00000465669 PNISRQ8TF01 805 aaKnown RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms