RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 NPC1L1Q9UHC9 1359 aa19.35■□□□□ 0.69
ABCA4-203ENST00000465352 SSFA2P28290 1259 aa19.35■□□□□ 0.69
ABCA4-203ENST00000465352 GPR162Q16538 588 aa19.35■□□□□ 0.69
ABCA4-203ENST00000465352 MSL1Q68DK7 614 aa19.35■□□□□ 0.69
ABCA4-203ENST00000465352 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
ABCA4-203ENST00000465352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.34■□□□□ 0.69
ABCA4-203ENST00000465352 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
ABCA4-203ENST00000465352 PHF14O94880 888 aa19.34■□□□□ 0.69
ABCA4-203ENST00000465352 LINC00116Q8NCU8 138 aa19.34■□□□□ 0.69
ABCA4-203ENST00000465352 GNPATO15228 680 aa19.33■□□□□ 0.68
ABCA4-203ENST00000465352 ITPK1Q13572 414 aa19.32■□□□□ 0.68
ABCA4-203ENST00000465352 AKAP4Q5JQC9 854 aa19.32■□□□□ 0.68
ABCA4-203ENST00000465352 UBR3Q6ZT12 1888 aa19.31■□□□□ 0.68
ABCA4-203ENST00000465352 CNGB1Q14028 1251 aaPredicted RBP19.31■□□□□ 0.68
ABCA4-203ENST00000465352 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
ABCA4-203ENST00000465352 KDM6AO15550 1401 aaPredicted RBP19.31■□□□□ 0.68
ABCA4-203ENST00000465352 HMOX1P09601 288 aa19.3■□□□□ 0.68
ABCA4-203ENST00000465352 NFATC2IPQ8NCF5 419 aa19.3■□□□□ 0.68
ABCA4-203ENST00000465352 RTCBQ9Y3I0 505 aaKnown RBP19.3■□□□□ 0.68
ABCA4-203ENST00000465352 CHD4Q14839 1912 aa19.29■□□□□ 0.68
ABCA4-203ENST00000465352 RC3H1Q5TC82 1133 aaKnown RBP19.29■□□□□ 0.68
ABCA4-203ENST00000465352 CD2APQ9Y5K6 639 aa19.29■□□□□ 0.68
ABCA4-203ENST00000465352 TRAPPC3LQ5T215 181 aa19.28■□□□□ 0.68
ABCA4-203ENST00000465352 NLGN2Q8NFZ4 835 aa19.28■□□□□ 0.68
ABCA4-203ENST00000465352 PTCD1O75127 700 aaKnown RBP19.27■□□□□ 0.68
ABCA4-203ENST00000465352 AMIGO3Q86WK7 504 aa19.27■□□□□ 0.68
ABCA4-203ENST00000465352 ZNF831Q5JPB2 1677 aa19.27■□□□□ 0.67
ABCA4-203ENST00000465352 U2SURPO15042 1029 aaKnown RBP19.26■□□□□ 0.67
ABCA4-203ENST00000465352 GRIN3BO60391 1043 aa19.26■□□□□ 0.67
ABCA4-203ENST00000465352 ADRA2BP18089 450 aa19.26■□□□□ 0.67
ABCA4-203ENST00000465352 SMIM5Q71RC9 77 aa19.26■□□□□ 0.67
ABCA4-203ENST00000465352 CFAP53Q96M91 514 aa19.26■□□□□ 0.67
ABCA4-203ENST00000465352 SLC4A9Q96Q91 983 aa19.26■□□□□ 0.67
ABCA4-203ENST00000465352 CNTNAP4Q9C0A0 1308 aa19.25■□□□□ 0.67
ABCA4-203ENST00000465352 SCN11AQ9UI33 1791 aa19.24■□□□□ 0.67
ABCA4-203ENST00000465352 RNMTO43148 476 aaKnown RBP19.24■□□□□ 0.67
ABCA4-203ENST00000465352 RPS6KA4O75676 772 aa19.24■□□□□ 0.67
ABCA4-203ENST00000465352 SLC52A2Q9HAB3 445 aa19.24■□□□□ 0.67
ABCA4-203ENST00000465352 RFC4P35249 363 aa19.23■□□□□ 0.67
ABCA4-203ENST00000465352 MTHFSDQ2M296 383 aaKnown RBP19.23■□□□□ 0.67
ABCA4-203ENST00000465352 NLGN1Q8N2Q7 840 aa19.23■□□□□ 0.67
ABCA4-203ENST00000465352 LGR6Q9HBX8 967 aa19.22■□□□□ 0.67
ABCA4-203ENST00000465352 NUDCQ9Y266 331 aa19.22■□□□□ 0.67
ABCA4-203ENST00000465352 GAS2L2Q8NHY3 880 aa19.21■□□□□ 0.67
ABCA4-203ENST00000465352 ARHGEF1Q92888 912 aaKnown RBP19.21■□□□□ 0.67
ABCA4-203ENST00000465352 CRKLP46109 303 aaKnown RBP19.2■□□□□ 0.66
ABCA4-203ENST00000465352 MMP10P09238 476 aa19.19■□□□□ 0.66
ABCA4-203ENST00000465352 ZNF784Q8NCA9 323 aaPredicted RBP19.19■□□□□ 0.66
ABCA4-203ENST00000465352 COL5A3P25940 1745 aaPredicted RBP19.19■□□□□ 0.66
ABCA4-203ENST00000465352 COL3A1P02461 1466 aaPredicted RBP19.18■□□□□ 0.66
ABCA4-203ENST00000465352 MYH14Q7Z406 1995 aaKnown RBP19.17■□□□□ 0.66
ABCA4-203ENST00000465352 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
ABCA4-203ENST00000465352 YBX3P16989 372 aaKnown RBP eCLIP19.17■□□□□ 0.66
ABCA4-203ENST00000465352 TEFQ10587 303 aa19.16■□□□□ 0.66
ABCA4-203ENST00000465352 SLC39A6Q13433 755 aa19.16■□□□□ 0.66
ABCA4-203ENST00000465352 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
ABCA4-203ENST00000465352 PARP3Q9Y6F1 533 aa19.16■□□□□ 0.66
ABCA4-203ENST00000465352 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
ABCA4-203ENST00000465352 MRC1P22897 1456 aa19.16■□□□□ 0.66
ABCA4-203ENST00000465352 GYS1P13807 737 aa19.15■□□□□ 0.66
ABCA4-203ENST00000465352 PPP2R1AP30153 589 aa19.15■□□□□ 0.66
ABCA4-203ENST00000465352 DNAJC10Q8IXB1 793 aa19.15■□□□□ 0.66
ABCA4-203ENST00000465352 CCDC87Q9NVE4 849 aa19.15■□□□□ 0.66
ABCA4-203ENST00000465352 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
ABCA4-203ENST00000465352 U2AF1L5P0DN76 240 aaPredicted RBP19.13■□□□□ 0.65
ABCA4-203ENST00000465352 PRKAR2BP31323 418 aa19.13■□□□□ 0.65
ABCA4-203ENST00000465352 U2AF1Q01081 240 aaKnown RBP eCLIP19.13■□□□□ 0.65
ABCA4-203ENST00000465352 CICQ96RK0 1608 aaPredicted RBP19.13■□□□□ 0.65
ABCA4-203ENST00000465352 ZPR1O75312 459 aa19.12■□□□□ 0.65
ABCA4-203ENST00000465352 TGFB2P61812 414 aa19.12■□□□□ 0.65
ABCA4-203ENST00000465352 INTS5Q6P9B9 1019 aaKnown RBP19.12■□□□□ 0.65
ABCA4-203ENST00000465352 UTRNP46939 3433 aa19.12■□□□□ 0.65
ABCA4-203ENST00000465352 TJP1Q07157 1748 aa19.11■□□□□ 0.65
ABCA4-203ENST00000465352 ADAMTS7Q9UKP4 1686 aa19.11■□□□□ 0.65
ABCA4-203ENST00000465352 USP42Q9H9J4 1324 aaKnown RBP19.11■□□□□ 0.65
ABCA4-203ENST00000465352 CYP19A1P11511 503 aaPredicted RBP19.11■□□□□ 0.65
ABCA4-203ENST00000465352 RSPH6AQ9H0K4 717 aa19.11■□□□□ 0.65
ABCA4-203ENST00000465352 FCHSD2O94868 740 aa19.1■□□□□ 0.65
ABCA4-203ENST00000465352 STARD3NLO95772 234 aa19.1■□□□□ 0.65
ABCA4-203ENST00000465352 IL17REQ8NFR9 667 aa19.1■□□□□ 0.65
ABCA4-203ENST00000465352 TEX13AQ9BXU3 409 aaPredicted RBP19.1■□□□□ 0.65
ABCA4-203ENST00000465352 SRP68Q9UHB9 627 aaKnown RBP19.1■□□□□ 0.65
ABCA4-203ENST00000465352 NEFMP07197 916 aa19.09■□□□□ 0.65
ABCA4-203ENST00000465352 RTF1Q92541 710 aaKnown RBP19.09■□□□□ 0.65
ABCA4-203ENST00000465352 SOS1Q07889 1333 aaPredicted RBP19.08■□□□□ 0.65
ABCA4-203ENST00000465352 ZNF790Q6PG37 636 aa19.08■□□□□ 0.64
ABCA4-203ENST00000465352 PHACTR3Q96KR7 559 aa19.08■□□□□ 0.64
ABCA4-203ENST00000465352 C4AP0C0L4 1744 aa19.08■□□□□ 0.64
ABCA4-203ENST00000465352 KCPQ6ZWJ8 1503 aa19.07■□□□□ 0.64
ABCA4-203ENST00000465352 FKBP8Q14318 412 aa19.07■□□□□ 0.64
ABCA4-203ENST00000465352 WWC3Q9ULE0 1092 aa19.07■□□□□ 0.64
ABCA4-203ENST00000465352 GOLGB1Q14789 3259 aaKnown RBP19.06■□□□□ 0.64
ABCA4-203ENST00000465352 USPL1Q5W0Q7 1092 aa19.06■□□□□ 0.64
ABCA4-203ENST00000465352 FMNL2Q96PY5 1086 aa19.06■□□□□ 0.64
ABCA4-203ENST00000465352 NARFQ9UHQ1 456 aa19.06■□□□□ 0.64
ABCA4-203ENST00000465352 ZBTB1Q9Y2K1 713 aa19.06■□□□□ 0.64
ABCA4-203ENST00000465352 KIF13BQ9NQT8 1826 aa19.06■□□□□ 0.64
ABCA4-203ENST00000465352 C10orf71Q711Q0 1435 aa19.06■□□□□ 0.64
ABCA4-203ENST00000465352 A0A087WZG4 1122 aa19.05■□□□□ 0.64
ABCA4-203ENST00000465352 A0A0G2JLW4 131 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms