RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 AK7Q96M32 723 aa20.28■□□□□ 0.84
MRPL55-225ENST00000465268 C5P01031 1676 aa20.28■□□□□ 0.84
MRPL55-225ENST00000465268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
MRPL55-225ENST00000465268 ATP6V1AP38606 617 aa20.27■□□□□ 0.84
MRPL55-225ENST00000465268 HMOX1P09601 288 aa20.26■□□□□ 0.83
MRPL55-225ENST00000465268 C4BP0C0L5 1744 aa20.26■□□□□ 0.83
MRPL55-225ENST00000465268 COL24A1Q17RW2 1714 aa20.26■□□□□ 0.83
MRPL55-225ENST00000465268 HSP90AB1P08238 724 aaKnown RBP20.25■□□□□ 0.83
MRPL55-225ENST00000465268 GOLGB1Q14789 3259 aaKnown RBP20.24■□□□□ 0.83
MRPL55-225ENST00000465268 CABP4P57796 275 aa20.24■□□□□ 0.83
MRPL55-225ENST00000465268 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
MRPL55-225ENST00000465268 GNPATO15228 680 aa20.23■□□□□ 0.83
MRPL55-225ENST00000465268 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
MRPL55-225ENST00000465268 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
MRPL55-225ENST00000465268 RBM42Q9BTD8 480 aaKnown RBP20.23■□□□□ 0.83
MRPL55-225ENST00000465268 TAF1LQ8IZX4 1826 aa20.23■□□□□ 0.83
MRPL55-225ENST00000465268 LGR6Q9HBX8 967 aa20.22■□□□□ 0.83
MRPL55-225ENST00000465268 NPC1L1Q9UHC9 1359 aa20.21■□□□□ 0.83
MRPL55-225ENST00000465268 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
MRPL55-225ENST00000465268 SSFA2P28290 1259 aa20.21■□□□□ 0.83
MRPL55-225ENST00000465268 GPR162Q16538 588 aa20.2■□□□□ 0.82
MRPL55-225ENST00000465268 COL3A1P02461 1466 aaPredicted RBP20.19■□□□□ 0.82
MRPL55-225ENST00000465268 PTCD1O75127 700 aaKnown RBP20.19■□□□□ 0.82
MRPL55-225ENST00000465268 MTHFSDQ2M296 383 aaKnown RBP20.19■□□□□ 0.82
MRPL55-225ENST00000465268 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
MRPL55-225ENST00000465268 YBX3P16989 372 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■□□□□ 10.7
MRPL55-225ENST00000465268 HMGB2P26583 209 aaKnown RBP20.18■□□□□ 0.82
MRPL55-225ENST00000465268 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
MRPL55-225ENST00000465268 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
MRPL55-225ENST00000465268 UBR3Q6ZT12 1888 aa20.16■□□□□ 0.82
MRPL55-225ENST00000465268 SLC52A2Q9HAB3 445 aa20.15■□□□□ 0.82
MRPL55-225ENST00000465268 CNTNAP4Q9C0A0 1308 aa20.14■□□□□ 0.81
MRPL55-225ENST00000465268 U2SURPO15042 1029 aaKnown RBP20.14■□□□□ 0.81
MRPL55-225ENST00000465268 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
MRPL55-225ENST00000465268 RC3H1Q5TC82 1133 aaKnown RBP20.14■□□□□ 0.81
MRPL55-225ENST00000465268 ARHGEF1Q92888 912 aaKnown RBP20.14■□□□□ 0.81
MRPL55-225ENST00000465268 RTCBQ9Y3I0 505 aaKnown RBP20.14■□□□□ 0.81
MRPL55-225ENST00000465268 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
MRPL55-225ENST00000465268 TRAPPC3LQ5T215 181 aa20.13■□□□□ 0.81
MRPL55-225ENST00000465268 ZNF784Q8NCA9 323 aaPredicted RBP20.13■□□□□ 0.81
MRPL55-225ENST00000465268 RPS6KA4O75676 772 aa20.12■□□□□ 0.81
MRPL55-225ENST00000465268 CRKLP46109 303 aaKnown RBP20.11■□□□□ 0.81
MRPL55-225ENST00000465268 WWC3Q9ULE0 1092 aa20.11■□□□□ 0.81
MRPL55-225ENST00000465268 MMP10P09238 476 aa20.1■□□□□ 0.81
MRPL55-225ENST00000465268 INTS5Q6P9B9 1019 aaKnown RBP20.1■□□□□ 0.81
MRPL55-225ENST00000465268 DNAJC10Q8IXB1 793 aa20.1■□□□□ 0.81
MRPL55-225ENST00000465268 GYS1P13807 737 aa20.09■□□□□ 0.81
MRPL55-225ENST00000465268 PPP2R1AP30153 589 aa20.09■□□□□ 0.81
MRPL55-225ENST00000465268 MRC1P22897 1456 aa20.08■□□□□ 0.81
MRPL55-225ENST00000465268 IL17REQ8NFR9 667 aa20.08■□□□□ 0.81
MRPL55-225ENST00000465268 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
MRPL55-225ENST00000465268 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.81
MRPL55-225ENST00000465268 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
MRPL55-225ENST00000465268 ADRA2BP18089 450 aa20.06■□□□□ 0.8
MRPL55-225ENST00000465268 RFC4P35249 363 aa20.06■□□□□ 0.8
MRPL55-225ENST00000465268 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
MRPL55-225ENST00000465268 COL5A3P25940 1745 aaPredicted RBP20.05■□□□□ 0.8
MRPL55-225ENST00000465268 KCPQ6ZWJ8 1503 aa20.05■□□□□ 0.8
MRPL55-225ENST00000465268 SCN11AQ9UI33 1791 aa20.04■□□□□ 0.8
MRPL55-225ENST00000465268 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
MRPL55-225ENST00000465268 PRKAR2BP31323 418 aa20.04■□□□□ 0.8
MRPL55-225ENST00000465268 NLGN1Q8N2Q7 840 aa20.04■□□□□ 0.8
MRPL55-225ENST00000465268 TJP1Q07157 1748 aa20.04■□□□□ 0.8
MRPL55-225ENST00000465268 MYH14Q7Z406 1995 aaKnown RBP20.03■□□□□ 0.8
MRPL55-225ENST00000465268 GRIN3BO60391 1043 aa20.03■□□□□ 0.8
MRPL55-225ENST00000465268 FKBP8Q14318 412 aa20.03■□□□□ 0.8
MRPL55-225ENST00000465268 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
MRPL55-225ENST00000465268 GNAT3A8MTJ3 354 aa20.02■□□□□ 0.8
MRPL55-225ENST00000465268 GAS2L2Q8NHY3 880 aa20.02■□□□□ 0.8
MRPL55-225ENST00000465268 CFAP53Q96M91 514 aa20.02■□□□□ 0.8
MRPL55-225ENST00000465268 CCDC87Q9NVE4 849 aa20.02■□□□□ 0.8
MRPL55-225ENST00000465268 USP42Q9H9J4 1324 aaKnown RBP20.02■□□□□ 0.79
MRPL55-225ENST00000465268 ZBTB1Q9Y2K1 713 aa20.01■□□□□ 0.79
MRPL55-225ENST00000465268 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
MRPL55-225ENST00000465268 U2AF1L5P0DN76 240 aaPredicted RBP20■□□□□ 0.79
MRPL55-225ENST00000465268 U2AF1Q01081 240 aaKnown RBP eCLIP20■□□□□ 0.79
MRPL55-225ENST00000465268 DDR1Q08345 913 aa20■□□□□ 0.79
MRPL55-225ENST00000465268 CICQ96RK0 1608 aaPredicted RBP20■□□□□ 0.79
MRPL55-225ENST00000465268 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
MRPL55-225ENST00000465268 A0A0G2JLW4 131 aa19.99■□□□□ 0.79
MRPL55-225ENST00000465268 KCNQ3O43525 872 aa19.99■□□□□ 0.79
MRPL55-225ENST00000465268 ZNF496Q96IT1 587 aaPredicted RBP19.99■□□□□ 0.79
MRPL55-225ENST00000465268 C10orf71Q711Q0 1435 aa19.99■□□□□ 0.79
MRPL55-225ENST00000465268 USPL1Q5W0Q7 1092 aa19.98■□□□□ 0.79
MRPL55-225ENST00000465268 CEMIPQ8WUJ3 1361 aa19.97■□□□□ 0.79
MRPL55-225ENST00000465268 TEFQ10587 303 aa19.97■□□□□ 0.79
MRPL55-225ENST00000465268 ZNF790Q6PG37 636 aa19.97■□□□□ 0.79
MRPL55-225ENST00000465268 VSIG10Q8N0Z9 540 aa19.97■□□□□ 0.79
MRPL55-225ENST00000465268 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
MRPL55-225ENST00000465268 PARP3Q9Y6F1 533 aa19.97■□□□□ 0.79
MRPL55-225ENST00000465268 DPEP1P16444 411 aa19.96■□□□□ 0.79
MRPL55-225ENST00000465268 TM4SF1P30408 202 aa19.96■□□□□ 0.79
MRPL55-225ENST00000465268 BCL2L12Q9HB09 334 aa19.96■□□□□ 0.79
MRPL55-225ENST00000465268 C4AP0C0L4 1744 aa19.96■□□□□ 0.79
MRPL55-225ENST00000465268 KCNA3P22001 575 aa19.95■□□□□ 0.78
MRPL55-225ENST00000465268 CANXP27824 592 aaKnown RBP19.95■□□□□ 0.78
MRPL55-225ENST00000465268 TGFB2P61812 414 aa19.95■□□□□ 0.78
MRPL55-225ENST00000465268 DCTN1Q14203 1278 aa19.95■□□□□ 0.78
MRPL55-225ENST00000465268 TTC5Q8N0Z6 440 aa19.95■□□□□ 0.78
MRPL55-225ENST00000465268 POLRMTO00411 1230 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms