RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.55■■■□□ 2.32
EDEM1-205ENST00000465187 IL13P35225 146 aa29.54■■■□□ 2.32
EDEM1-205ENST00000465187 ATP6V1AP38606 617 aa29.54■■■□□ 2.32
EDEM1-205ENST00000465187 ZNF784Q8NCA9 323 aaPredicted RBP29.54■■■□□ 2.32
EDEM1-205ENST00000465187 PLEKHO1Q53GL0 409 aaPredicted RBP29.53■■■□□ 2.32
EDEM1-205ENST00000465187 SULT6B1Q6IMI4 303 aa29.53■■■□□ 2.32
EDEM1-205ENST00000465187 PLEKHG2Q9H7P9 1386 aa29.52■■■□□ 2.32
EDEM1-205ENST00000465187 YBX3P16989 372 aaKnown RBP eCLIP29.52■■■□□ 2.32
EDEM1-205ENST00000465187 VIRMAQ69YN4 1812 aaKnown RBP29.52■■■□□ 2.32
EDEM1-205ENST00000465187 SCN11AQ9UI33 1791 aa29.52■■■□□ 2.32
EDEM1-205ENST00000465187 PER1O15534 1290 aaPredicted RBP29.51■■■□□ 2.31
EDEM1-205ENST00000465187 FLAD1Q8NFF5 587 aa29.51■■■□□ 2.31
EDEM1-205ENST00000465187 ZNF831Q5JPB2 1677 aa29.5■■■□□ 2.31
EDEM1-205ENST00000465187 GNPATO15228 680 aa29.5■■■□□ 2.31
EDEM1-205ENST00000465187 DCAF5Q96JK2 942 aa29.5■■■□□ 2.31
EDEM1-205ENST00000465187 MYH14Q7Z406 1995 aaKnown RBP29.49■■■□□ 2.31
EDEM1-205ENST00000465187 ERVV-2B6SEH9 535 aa29.48■■■□□ 2.31
EDEM1-205ENST00000465187 MTHFSP49914 203 aa29.48■■■□□ 2.31
EDEM1-205ENST00000465187 CNGB1Q14028 1251 aaPredicted RBP29.48■■■□□ 2.31
EDEM1-205ENST00000465187 CC2D1BQ5T0F9 858 aaKnown RBP29.48■■■□□ 2.31
EDEM1-205ENST00000465187 RBM42Q9BTD8 480 aaKnown RBP29.48■■■□□ 2.31
EDEM1-205ENST00000465187 SSFA2P28290 1259 aa29.47■■■□□ 2.31
EDEM1-205ENST00000465187 TJP1Q07157 1748 aa29.45■■■□□ 2.31
EDEM1-205ENST00000465187 AMOTQ4VCS5 1084 aa29.45■■■□□ 2.31
EDEM1-205ENST00000465187 WWC3Q9ULE0 1092 aa29.45■■■□□ 2.31
EDEM1-205ENST00000465187 C4AP0C0L4 1744 aa29.45■■■□□ 2.3
EDEM1-205ENST00000465187 HSP90AB1P08238 724 aaKnown RBP29.44■■■□□ 2.3
EDEM1-205ENST00000465187 CABP4P57796 275 aa29.44■■■□□ 2.3
EDEM1-205ENST00000465187 HMOX1P09601 288 aa29.43■■■□□ 2.3
EDEM1-205ENST00000465187 C1orf141Q5JVX7 400 aa29.42■■■□□ 2.3
EDEM1-205ENST00000465187 NFATC2IPQ8NCF5 419 aa29.42■■■□□ 2.3
EDEM1-205ENST00000465187 PTCD1O75127 700 aaKnown RBP29.4■■■□□ 2.3
EDEM1-205ENST00000465187 CD2APQ9Y5K6 639 aa29.4■■■□□ 2.3
EDEM1-205ENST00000465187 LGR6Q9HBX8 967 aa29.39■■■□□ 2.3
EDEM1-205ENST00000465187 COL3A1P02461 1466 aaPredicted RBP29.39■■■□□ 2.3
EDEM1-205ENST00000465187 KIAA1551Q9HCM1 1747 aa29.39■■■□□ 2.3
EDEM1-205ENST00000465187 HMGB2P26583 209 aaKnown RBP29.38■■■□□ 2.29
EDEM1-205ENST00000465187 N4BP2Q86UW6 1770 aaPredicted RBP29.36■■■□□ 2.29
EDEM1-205ENST00000465187 CICQ96RK0 1608 aaPredicted RBP29.35■■■□□ 2.29
EDEM1-205ENST00000465187 ARHGEF1Q92888 912 aaKnown RBP29.35■■■□□ 2.29
EDEM1-205ENST00000465187 RTCBQ9Y3I0 505 aaKnown RBP29.35■■■□□ 2.29
EDEM1-205ENST00000465187 KIF13BQ9NQT8 1826 aa29.35■■■□□ 2.29
EDEM1-205ENST00000465187 ADAMTS7Q9UKP4 1686 aa29.34■■■□□ 2.29
EDEM1-205ENST00000465187 MMP10P09238 476 aa29.34■■■□□ 2.29
EDEM1-205ENST00000465187 CNTNAP4Q9C0A0 1308 aa29.34■■■□□ 2.29
EDEM1-205ENST00000465187 MRC1P22897 1456 aa29.32■■■□□ 2.28
EDEM1-205ENST00000465187 MTHFSDQ2M296 383 aaKnown RBP29.32■■■□□ 2.28
EDEM1-205ENST00000465187 AKAP4Q5JQC9 854 aa29.32■■■□□ 2.28
EDEM1-205ENST00000465187 TRAPPC3LQ5T215 181 aa29.32■■■□□ 2.28
EDEM1-205ENST00000465187 DIAPH1O60610 1272 aaKnown RBP29.31■■■□□ 2.28
EDEM1-205ENST00000465187 RC3H1Q5TC82 1133 aaKnown RBP29.31■■■□□ 2.28
EDEM1-205ENST00000465187 RPS6KA4O75676 772 aa29.3■■■□□ 2.28
EDEM1-205ENST00000465187 CRKLP46109 303 aaKnown RBP29.3■■■□□ 2.28
EDEM1-205ENST00000465187 RNMTO43148 476 aaKnown RBP29.29■■■□□ 2.28
EDEM1-205ENST00000465187 GYS1P13807 737 aa29.29■■■□□ 2.28
EDEM1-205ENST00000465187 SLC39A6Q13433 755 aa29.29■■■□□ 2.28
EDEM1-205ENST00000465187 SLC52A2Q9HAB3 445 aa29.29■■■□□ 2.28
EDEM1-205ENST00000465187 GRIN3BO60391 1043 aa29.28■■■□□ 2.28
EDEM1-205ENST00000465187 SRP68Q9UHB9 627 aaKnown RBP29.28■■■□□ 2.28
EDEM1-205ENST00000465187 KCPQ6ZWJ8 1503 aa29.28■■■□□ 2.28
EDEM1-205ENST00000465187 NPC1L1Q9UHC9 1359 aa29.27■■■□□ 2.28
EDEM1-205ENST00000465187 PXDNLA1KZ92 1463 aa29.27■■■□□ 2.28
EDEM1-205ENST00000465187 DNAJC10Q8IXB1 793 aa29.25■■■□□ 2.27
EDEM1-205ENST00000465187 UBR2Q8IWV8 1755 aa29.25■■■□□ 2.27
EDEM1-205ENST00000465187 RFC4P35249 363 aa29.24■■■□□ 2.27
EDEM1-205ENST00000465187 INTS5Q6P9B9 1019 aaKnown RBP29.24■■■□□ 2.27
EDEM1-205ENST00000465187 C10orf71Q711Q0 1435 aa29.23■■■□□ 2.27
EDEM1-205ENST00000465187 ADRA2BP18089 450 aa29.23■■■□□ 2.27
EDEM1-205ENST00000465187 U2SURPO15042 1029 aaKnown RBP29.22■■■□□ 2.27
EDEM1-205ENST00000465187 BRCA1P38398 1863 aaKnown RBP29.22■■■□□ 2.27
EDEM1-205ENST00000465187 SIPA1L3O60292 1781 aaPredicted RBP29.21■■■□□ 2.27
EDEM1-205ENST00000465187 NLGN1Q8N2Q7 840 aa29.21■■■□□ 2.27
EDEM1-205ENST00000465187 ATP10DQ9P241 1426 aa29.2■■■□□ 2.27
EDEM1-205ENST00000465187 A0A0G2JLW4 131 aa29.19■■■□□ 2.26
EDEM1-205ENST00000465187 FKBP8Q14318 412 aa29.19■■■□□ 2.26
EDEM1-205ENST00000465187 USP42Q9H9J4 1324 aaKnown RBP29.19■■■□□ 2.26
EDEM1-205ENST00000465187 C1QTNF8P60827 252 aa29.18■■■□□ 2.26
EDEM1-205ENST00000465187 ADCY9O60503 1353 aa29.17■■■□□ 2.26
EDEM1-205ENST00000465187 DDR1Q08345 913 aa29.17■■■□□ 2.26
EDEM1-205ENST00000465187 CYP19A1P11511 503 aaPredicted RBP29.16■■■□□ 2.26
EDEM1-205ENST00000465187 CCDC87Q9NVE4 849 aa29.16■■■□□ 2.26
EDEM1-205ENST00000465187 DPEP1P16444 411 aa29.14■■■□□ 2.26
EDEM1-205ENST00000465187 IL17REQ8NFR9 667 aa29.14■■■□□ 2.26
EDEM1-205ENST00000465187 SOS1Q07889 1333 aaPredicted RBP29.14■■■□□ 2.25
EDEM1-205ENST00000465187 GIGYF1O75420 1035 aaPredicted RBP29.13■■■□□ 2.25
EDEM1-205ENST00000465187 PHACTR3Q96KR7 559 aa29.13■■■□□ 2.25
EDEM1-205ENST00000465187 ZBTB1Q9Y2K1 713 aa29.13■■■□□ 2.25
EDEM1-205ENST00000465187 PARP3Q9Y6F1 533 aa29.13■■■□□ 2.25
EDEM1-205ENST00000465187 AFDNP55196 1824 aaKnown RBP29.13■■■□□ 2.25
EDEM1-205ENST00000465187 ZNF526Q8TF50 670 aaPredicted RBP29.12■■■□□ 2.25
EDEM1-205ENST00000465187 USPL1Q5W0Q7 1092 aa29.11■■■□□ 2.25
EDEM1-205ENST00000465187 KCNA3P22001 575 aa29.1■■■□□ 2.25
EDEM1-205ENST00000465187 BCS1LQ9Y276 419 aa29.1■■■□□ 2.25
EDEM1-205ENST00000465187 TGFB2P61812 414 aa29.09■■■□□ 2.25
EDEM1-205ENST00000465187 RSPH6AQ9H0K4 717 aa29.09■■■□□ 2.25
EDEM1-205ENST00000465187 SENP3-EIF4A1A0A087X0R7 540 aa29.08■■■□□ 2.25
EDEM1-205ENST00000465187 PPP2R1AP30153 589 aa29.08■■■□□ 2.25
EDEM1-205ENST00000465187 PRKAR2BP31323 418 aa29.08■■■□□ 2.25
EDEM1-205ENST00000465187 COL15A1P39059 1388 aa29.08■■■□□ 2.25
EDEM1-205ENST00000465187 GNAT3A8MTJ3 354 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms