RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 FILIP1Q7Z7B0 1213 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 SRCIN1Q9C0H9 1055 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 NUP62CLQ9H1M0 184 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 C1orf115Q9H7X2 142 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 V9GYY5 206 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-204ENST00000464316 SBNO2Q9Y2G9 1366 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 VGLL3A8MV65 326 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 BECN2A8MW95 431 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 APBB1O00213 710 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 ZSCAN22P10073 491 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-204ENST00000464316 KRT85P78386 507 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 CCDC186Q7Z3E2 898 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 TMEM87AQ8NBN3 555 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 UGGT1Q9NYU2 1555 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 FIBPO43427 364 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 SLU7O95391 586 aaKnown RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 IRX5P78411 483 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 NCBP1Q09161 790 aaKnown RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 TMCO3Q6UWJ1 677 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 PLCD3Q8N3E9 789 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 ZSCAN31Q96LW9 406 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 ZDHHC9Q9Y397 364 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 SLFN14P0C7P3 912 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 TWISTNBQ3B726 338 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 SLFNL1Q499Z3 407 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 HDGFL2Q7Z4V5 671 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 C17orf53Q8N3J3 647 aaPredicted RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 ANKRD44Q8N8A2 993 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 RTF1Q92541 710 aaKnown RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 RASSF4Q9H2L5 321 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 TNMDQ9H2S6 317 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 YEATS2Q9ULM3 1422 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 PLA2R1Q13018 1463 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 NWD1Q149M9 1564 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 STX6O43752 255 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 MRPL50Q8N5N7 158 aaKnown RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 MNS1Q8NEH6 495 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 TRIM34Q9BYJ4 488 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 GDPD2Q9HCC8 539 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 DDX19AQ9NUU7 478 aaKnown RBP4.6□□□□□ -1.67
CCNL1-204ENST00000464316 TRAK1Q9UPV9 953 aa4.6□□□□□ -1.67
CCNL1-204ENST00000464316 GSPT1P15170 499 aaKnown RBP4.59□□□□□ -1.67
CCNL1-204ENST00000464316 PTGS1P23219 599 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 GSDMDP57764 484 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 UBXN4Q92575 508 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 RILPL2Q969X0 211 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 SCAND2PQ9GZW5 306 aaPredicted RBP4.59□□□□□ -1.67
CCNL1-204ENST00000464316 NSFL1CQ9UNZ2 370 aaKnown RBP4.59□□□□□ -1.67
CCNL1-204ENST00000464316 PPIP5K1Q6PFW1 1433 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 NRXN3Q9Y4C0 1643 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 NOS1P29475 1434 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 GIMAP6Q6P9H5 292 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 RUFY2Q8WXA3 655 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 NAT10Q9H0A0 1025 aaKnown RBP4.59□□□□□ -1.67
CCNL1-204ENST00000464316 CLIP2Q9UDT6 1046 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 PYCARDQ9ULZ3 195 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 LIMCH1Q9UPQ0 1083 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 TRIM35Q9UPQ4 493 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 ANKRD26Q9UPS8 1709 aa4.59□□□□□ -1.67
CCNL1-204ENST00000464316 STRCQ7RTU9 1775 aa4.59□□□□□ -1.68
CCNL1-204ENST00000464316 TRAPPC8Q9Y2L5 1435 aa4.59□□□□□ -1.68
CCNL1-204ENST00000464316 SPAG9O60271 1321 aaKnown RBP4.59□□□□□ -1.68
CCNL1-204ENST00000464316 ELL2O00472 640 aaPredicted RBP4.59□□□□□ -1.68
CCNL1-204ENST00000464316 ATP8B1O43520 1251 aa4.59□□□□□ -1.68
CCNL1-204ENST00000464316 VAMP4O75379 141 aa4.59□□□□□ -1.68
CCNL1-204ENST00000464316 LEKR1Q6ZMV7 388 aa4.59□□□□□ -1.68
CCNL1-204ENST00000464316 SRRTQ9BXP5 876 aaKnown RBP4.59□□□□□ -1.68
CCNL1-204ENST00000464316 DEF6Q9H4E7 631 aa4.59□□□□□ -1.68
CCNL1-204ENST00000464316 SH2B1Q9NRF2 756 aaPredicted RBP4.59□□□□□ -1.68
CCNL1-204ENST00000464316 C3P01024 1663 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 GADD45BO75293 160 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-204ENST00000464316 F13A1P00488 732 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 APPP05067 770 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 SRPK2P78362 688 aaKnown RBP4.58□□□□□ -1.68
CCNL1-204ENST00000464316 NFE2L2Q16236 605 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 ESYT1Q9BSJ8 1104 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 COL24A1Q17RW2 1714 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 VPS37CA5D8V6 355 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-204ENST00000464316 CTAGE5O15320 804 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 ZNF165P49910 485 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 GTF2A1P52655 376 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-204ENST00000464316 HOMER1Q86YM7 354 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 CNPY2Q9Y2B0 182 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 CLTCQ00610 1675 aaKnown RBP4.58□□□□□ -1.68
CCNL1-204ENST00000464316 IQGAP1P46940 1657 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 ABCC4O15439 1325 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 ELP1O95163 1332 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 ALKQ9UM73 1620 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 IVLP07476 585 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 ZKSCAN1P17029 563 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-204ENST00000464316 PDE1AP54750 535 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 TYRO3Q06418 890 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 JARID2Q92833 1246 aaPredicted RBP4.58□□□□□ -1.68
CCNL1-204ENST00000464316 OSBPL3Q9H4L5 887 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 DUOX2Q9NRD8 1548 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 PPLO60437 1756 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 LMTK3Q96Q04 1460 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 SSH2Q76I76 1423 aa4.58□□□□□ -1.68
CCNL1-204ENST00000464316 SKILP12757 684 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 ZSCAN25Q6NSZ9 544 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms