RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 MAPK8IP3Q9UPT6 1336 aa34.7■■■■□ 3.15
SURF1-203ENST00000463965 RTF1Q92541 710 aaKnown RBP34.69■■■■□ 3.14
SURF1-203ENST00000463965 TEFQ10587 303 aa34.67■■■■□ 3.14
SURF1-203ENST00000463965 PLEKHF1Q96S99 279 aa34.66■■■■□ 3.14
SURF1-203ENST00000463965 RBM42Q9BTD8 480 aaKnown RBP34.66■■■■□ 3.14
SURF1-203ENST00000463965 IL17REQ8NFR9 667 aa34.65■■■■□ 3.14
SURF1-203ENST00000463965 AKT1S1Q96B36 256 aa34.65■■■■□ 3.14
SURF1-203ENST00000463965 PAPPAQ13219 1627 aa34.65■■■■□ 3.14
SURF1-203ENST00000463965 ATP6V1AP38606 617 aa34.64■■■■□ 3.14
SURF1-203ENST00000463965 ZNF827Q17R98 1081 aa34.64■■■■□ 3.14
SURF1-203ENST00000463965 TFCP2L1Q9NZI6 479 aa34.64■■■■□ 3.14
SURF1-203ENST00000463965 HTATSF1O43719 755 aaKnown RBP34.63■■■■□ 3.13
SURF1-203ENST00000463965 MRC1P22897 1456 aa34.62■■■■□ 3.13
SURF1-203ENST00000463965 SRCAPQ6ZRS2 3230 aa34.61■■■■□ 3.13
SURF1-203ENST00000463965 ADAMTS7Q9UKP4 1686 aa34.6■■■■□ 3.13
SURF1-203ENST00000463965 NFE2L2Q16236 605 aa34.6■■■■□ 3.13
SURF1-203ENST00000463965 PTCD1O75127 700 aaKnown RBP34.59■■■■□ 3.13
SURF1-203ENST00000463965 VIRMAQ69YN4 1812 aaKnown RBP34.58■■■■□ 3.13
SURF1-203ENST00000463965 AK7Q96M32 723 aa34.57■■■■□ 3.12
SURF1-203ENST00000463965 ADAMTS8Q9UP79 889 aa34.57■■■■□ 3.12
SURF1-203ENST00000463965 CEMIPQ8WUJ3 1361 aa34.57■■■■□ 3.12
SURF1-203ENST00000463965 TTC5Q8N0Z6 440 aa34.56■■■■□ 3.12
SURF1-203ENST00000463965 C5P01031 1676 aa34.55■■■■□ 3.12
SURF1-203ENST00000463965 ITPK1Q13572 414 aa34.55■■■■□ 3.12
SURF1-203ENST00000463965 MCM10Q7L590 875 aa34.55■■■■□ 3.12
SURF1-203ENST00000463965 SLC39A6Q13433 755 aa34.54■■■■□ 3.12
SURF1-203ENST00000463965 RUNDC1Q96C34 613 aa34.54■■■■□ 3.12
SURF1-203ENST00000463965 LINC00116Q8NCU8 138 aa34.53■■■■□ 3.12
SURF1-203ENST00000463965 CCDC146Q8IYE0 955 aa34.52■■■■□ 3.12
SURF1-203ENST00000463965 FLAD1Q8NFF5 587 aa34.52■■■■□ 3.12
SURF1-203ENST00000463965 SPON1Q9HCB6 807 aa34.52■■■■□ 3.12
SURF1-203ENST00000463965 TAF1LQ8IZX4 1826 aa34.51■■■■□ 3.12
SURF1-203ENST00000463965 DCTN1Q14203 1278 aa34.51■■■■□ 3.12
SURF1-203ENST00000463965 SLC4A9Q96Q91 983 aa34.51■■■■□ 3.12
SURF1-203ENST00000463965 PDGFDQ9GZP0 370 aaPredicted RBP34.51■■■■□ 3.12
SURF1-203ENST00000463965 BTBD11A6QL63 1104 aa34.5■■■■□ 3.11
SURF1-203ENST00000463965 PNPLA7Q6ZV29 1317 aa34.5■■■■□ 3.11
SURF1-203ENST00000463965 MRS2Q9HD23 443 aa34.49■■■■□ 3.11
SURF1-203ENST00000463965 C4BP0C0L5 1744 aa34.49■■■■□ 3.11
SURF1-203ENST00000463965 MSH5O43196 834 aa34.48■■■■□ 3.11
SURF1-203ENST00000463965 ZBTB7AO95365 584 aa34.48■■■■□ 3.11
SURF1-203ENST00000463965 RIPK4P57078 832 aa34.48■■■■□ 3.11
SURF1-203ENST00000463965 LMOD3Q0VAK6 560 aa34.48■■■■□ 3.11
SURF1-203ENST00000463965 ZNF790Q6PG37 636 aa34.48■■■■□ 3.11
SURF1-203ENST00000463965 SLC16A10Q8TF71 515 aa34.48■■■■□ 3.11
SURF1-203ENST00000463965 ZNF831Q5JPB2 1677 aa34.47■■■■□ 3.11
SURF1-203ENST00000463965 TMPOP42166 694 aaKnown RBP34.47■■■■□ 3.11
SURF1-203ENST00000463965 MTFR1LQ9H019 292 aa34.47■■■■□ 3.11
SURF1-203ENST00000463965 CASZ1Q86V15 1759 aa34.46■■■■□ 3.11
SURF1-203ENST00000463965 QSER1Q2KHR3 1735 aa34.45■■■■□ 3.11
SURF1-203ENST00000463965 GNPATO15228 680 aa34.45■■■■□ 3.11
SURF1-203ENST00000463965 TAF7Q15545 349 aaPredicted RBP34.45■■■■□ 3.11
SURF1-203ENST00000463965 CCDC184Q52MB2 194 aa34.45■■■■□ 3.11
SURF1-203ENST00000463965 RC3H1Q5TC82 1133 aaKnown RBP34.45■■■■□ 3.11
SURF1-203ENST00000463965 VSIG10Q8N0Z9 540 aa34.45■■■■□ 3.11
SURF1-203ENST00000463965 LRP5O75197 1615 aa34.44■■■■□ 3.1
SURF1-203ENST00000463965 CNTNAP4Q9C0A0 1308 aa34.43■■■■□ 3.1
SURF1-203ENST00000463965 DLG5Q8TDM6 1919 aa34.42■■■■□ 3.1
SURF1-203ENST00000463965 SSFA2P28290 1259 aa34.42■■■■□ 3.1
SURF1-203ENST00000463965 COL23A1Q86Y22 540 aaPredicted RBP34.42■■■■□ 3.1
SURF1-203ENST00000463965 ATF5Q9Y2D1 282 aaPredicted RBP34.42■■■■□ 3.1
SURF1-203ENST00000463965 PHF14O94880 888 aa34.41■■■■□ 3.1
SURF1-203ENST00000463965 NEUROD2Q15784 382 aa34.41■■■■□ 3.1
SURF1-203ENST00000463965 PNISRQ8TF01 805 aaKnown RBP34.41■■■■□ 3.1
SURF1-203ENST00000463965 FMNL2Q96PY5 1086 aa34.41■■■■□ 3.1
SURF1-203ENST00000463965 RTCBQ9Y3I0 505 aaKnown RBP34.41■■■■□ 3.1
SURF1-203ENST00000463965 SIPA1L3O60292 1781 aaPredicted RBP34.41■■■■□ 3.1
SURF1-203ENST00000463965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.4■■■■□ 3.1
SURF1-203ENST00000463965 DNAJC10Q8IXB1 793 aa34.4■■■■□ 3.1
SURF1-203ENST00000463965 RRP7AQ9Y3A4 280 aaKnown RBP34.4■■■■□ 3.1
SURF1-203ENST00000463965 KCPQ6ZWJ8 1503 aa34.4■■■■□ 3.1
SURF1-203ENST00000463965 ZNF496Q96IT1 587 aaPredicted RBP34.39■■■■□ 3.1
SURF1-203ENST00000463965 PPP1R1BQ9UD71 204 aaPredicted RBP34.39■■■■□ 3.1
SURF1-203ENST00000463965 TUBGCP6Q96RT7 1819 aa34.39■■■■□ 3.1
SURF1-203ENST00000463965 CRKLP46109 303 aaKnown RBP34.38■■■■□ 3.09
SURF1-203ENST00000463965 TEX13AQ9BXU3 409 aaPredicted RBP34.38■■■■□ 3.09
SURF1-203ENST00000463965 THUMPD2Q9BTF0 503 aaKnown RBP34.37■■■■□ 3.09
SURF1-203ENST00000463965 STARD3NLO95772 234 aa34.36■■■■□ 3.09
SURF1-203ENST00000463965 HEG1Q9ULI3 1381 aa34.36■■■■□ 3.09
SURF1-203ENST00000463965 RPS6KA4O75676 772 aa34.35■■■■□ 3.09
SURF1-203ENST00000463965 TRAPPC3LQ5T215 181 aa34.35■■■■□ 3.09
SURF1-203ENST00000463965 KCNQ3O43525 872 aa34.34■■■■□ 3.09
SURF1-203ENST00000463965 ADRA2BP18089 450 aa34.34■■■■□ 3.09
SURF1-203ENST00000463965 COL5A3P25940 1745 aaPredicted RBP34.34■■■■□ 3.09
SURF1-203ENST00000463965 UBR2Q8IWV8 1755 aa34.34■■■■□ 3.09
SURF1-203ENST00000463965 CYP19A1P11511 503 aaPredicted RBP34.33■■■■□ 3.09
SURF1-203ENST00000463965 CCDC87Q9NVE4 849 aa34.33■■■■□ 3.09
SURF1-203ENST00000463965 CICQ96RK0 1608 aaPredicted RBP34.33■■■■□ 3.09
SURF1-203ENST00000463965 UBR3Q6ZT12 1888 aa34.33■■■■□ 3.09
SURF1-203ENST00000463965 POLD1P28340 1107 aa34.32■■■■□ 3.08
SURF1-203ENST00000463965 AMIGO3Q86WK7 504 aa34.32■■■■□ 3.08
SURF1-203ENST00000463965 TJP1Q07157 1748 aa34.32■■■■□ 3.08
SURF1-203ENST00000463965 APAF1O14727 1248 aa34.31■■■■□ 3.08
SURF1-203ENST00000463965 PTGER2P43116 358 aa34.31■■■■□ 3.08
SURF1-203ENST00000463965 MIS18AQ9NYP9 233 aa34.31■■■■□ 3.08
SURF1-203ENST00000463965 INTS5Q6P9B9 1019 aaKnown RBP34.3■■■■□ 3.08
SURF1-203ENST00000463965 SMIM5Q71RC9 77 aa34.3■■■■□ 3.08
SURF1-203ENST00000463965 SNRPA1P09661 255 aaKnown RBP34.28■■■■□ 3.08
SURF1-203ENST00000463965 RFC4P35249 363 aa34.28■■■■□ 3.08
SURF1-203ENST00000463965 BABAM1Q9NWV8 329 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms