RNA–Protein interactions for RNA: ENST00000463948.1

EGFR-209, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-209ENST00000463948 SSFA2P28290 1259 aa25.78■■□□□ 1.72
EGFR-209ENST00000463948 PLEKHO1Q53GL0 409 aaPredicted RBP25.77■■□□□ 1.72
EGFR-209ENST00000463948 RBM42Q9BTD8 480 aaKnown RBP25.77■■□□□ 1.72
EGFR-209ENST00000463948 IGSF1Q8N6C5 1336 aa25.77■■□□□ 1.72
EGFR-209ENST00000463948 SENP3-EIF4A1A0A087X0R7 540 aa25.76■■□□□ 1.71
EGFR-209ENST00000463948 ZNF530Q6P9A1 599 aaPredicted RBP25.75■■□□□ 1.71
EGFR-209ENST00000463948 AEBP1Q8IUX7 1158 aa25.75■■□□□ 1.71
EGFR-209ENST00000463948 ERVV-2B6SEH9 535 aa25.74■■□□□ 1.71
EGFR-209ENST00000463948 GIGYF1O75420 1035 aaPredicted RBP25.74■■□□□ 1.71
EGFR-209ENST00000463948 SLC4A9Q96Q91 983 aa25.74■■□□□ 1.71
EGFR-209ENST00000463948 UBR3Q6ZT12 1888 aa25.74■■□□□ 1.71
EGFR-209ENST00000463948 DCAF5Q96JK2 942 aa25.73■■□□□ 1.71
EGFR-209ENST00000463948 HSP90AB1P08238 724 aaKnown RBP25.72■■□□□ 1.71
EGFR-209ENST00000463948 CABP4P57796 275 aa25.72■■□□□ 1.71
EGFR-209ENST00000463948 KNSTRNQ9Y448 316 aa25.72■■□□□ 1.71
EGFR-209ENST00000463948 MTHFSP49914 203 aa25.7■■□□□ 1.7
EGFR-209ENST00000463948 AMOTQ4VCS5 1084 aa25.7■■□□□ 1.7
EGFR-209ENST00000463948 TRAPPC3LQ5T215 181 aa25.7■■□□□ 1.7
EGFR-209ENST00000463948 RTCBQ9Y3I0 505 aaKnown RBP25.7■■□□□ 1.7
EGFR-209ENST00000463948 MMP10P09238 476 aa25.69■■□□□ 1.7
EGFR-209ENST00000463948 SULT6B1Q6IMI4 303 aa25.69■■□□□ 1.7
EGFR-209ENST00000463948 PTCD1O75127 700 aaKnown RBP25.67■■□□□ 1.7
EGFR-209ENST00000463948 C1orf141Q5JVX7 400 aa25.67■■□□□ 1.7
EGFR-209ENST00000463948 NFATC2IPQ8NCF5 419 aa25.66■■□□□ 1.7
EGFR-209ENST00000463948 ARHGEF1Q92888 912 aaKnown RBP25.66■■□□□ 1.7
EGFR-209ENST00000463948 ZNF526Q8TF50 670 aaPredicted RBP25.65■■□□□ 1.7
EGFR-209ENST00000463948 KDM6AO15550 1401 aaPredicted RBP25.64■■□□□ 1.7
EGFR-209ENST00000463948 IL13P35225 146 aa25.64■■□□□ 1.7
EGFR-209ENST00000463948 RC3H1Q5TC82 1133 aaKnown RBP25.64■■□□□ 1.7
EGFR-209ENST00000463948 KDRP35968 1356 aa25.64■■□□□ 1.69
EGFR-209ENST00000463948 ATP10DQ9P241 1426 aa25.63■■□□□ 1.69
EGFR-209ENST00000463948 PLEKHG2Q9H7P9 1386 aa25.62■■□□□ 1.69
EGFR-209ENST00000463948 RPS6KA4O75676 772 aa25.62■■□□□ 1.69
EGFR-209ENST00000463948 RFC4P35249 363 aa25.62■■□□□ 1.69
EGFR-209ENST00000463948 NLGN1Q8N2Q7 840 aa25.62■■□□□ 1.69
EGFR-209ENST00000463948 A0A0G2JLW4 131 aa25.6■■□□□ 1.69
EGFR-209ENST00000463948 AMER1Q5JTC6 1135 aaPredicted RBP25.6■■□□□ 1.69
EGFR-209ENST00000463948 GPBP1L1Q9HC44 474 aaPredicted RBP25.6■■□□□ 1.69
EGFR-209ENST00000463948 GYS1P13807 737 aa25.58■■□□□ 1.69
EGFR-209ENST00000463948 ADRA2BP18089 450 aa25.58■■□□□ 1.69
EGFR-209ENST00000463948 KIF7Q2M1P5 1343 aa25.58■■□□□ 1.69
EGFR-209ENST00000463948 CNTNAP4Q9C0A0 1308 aa25.58■■□□□ 1.69
EGFR-209ENST00000463948 HMOX1P09601 288 aa25.57■■□□□ 1.68
EGFR-209ENST00000463948 CNGB1Q14028 1251 aaPredicted RBP25.57■■□□□ 1.68
EGFR-209ENST00000463948 CRKLP46109 303 aaKnown RBP25.56■■□□□ 1.68
EGFR-209ENST00000463948 LGR6Q9HBX8 967 aa25.56■■□□□ 1.68
EGFR-209ENST00000463948 CC2D1BQ5T0F9 858 aaKnown RBP25.55■■□□□ 1.68
EGFR-209ENST00000463948 SRP68Q9UHB9 627 aaKnown RBP25.55■■□□□ 1.68
EGFR-209ENST00000463948 BCS1LQ9Y276 419 aa25.55■■□□□ 1.68
EGFR-209ENST00000463948 PARP3Q9Y6F1 533 aa25.55■■□□□ 1.68
EGFR-209ENST00000463948 CEP350Q5VT06 3117 aa25.54■■□□□ 1.68
EGFR-209ENST00000463948 TGFB2P61812 414 aa25.54■■□□□ 1.68
EGFR-209ENST00000463948 CCDC87Q9NVE4 849 aa25.54■■□□□ 1.68
EGFR-209ENST00000463948 MYH14Q7Z406 1995 aaKnown RBP25.53■■□□□ 1.68
EGFR-209ENST00000463948 DPEP1P16444 411 aa25.53■■□□□ 1.68
EGFR-209ENST00000463948 AKAP4Q5JQC9 854 aa25.53■■□□□ 1.68
EGFR-209ENST00000463948 CICQ96RK0 1608 aaPredicted RBP25.52■■□□□ 1.68
EGFR-209ENST00000463948 ARHGAP27Q6ZUM4 889 aa25.51■■□□□ 1.67
EGFR-209ENST00000463948 PXDNLA1KZ92 1463 aa25.51■■□□□ 1.67
EGFR-209ENST00000463948 ADCY9O60503 1353 aa25.5■■□□□ 1.67
EGFR-209ENST00000463948 SLC39A6Q13433 755 aa25.5■■□□□ 1.67
EGFR-209ENST00000463948 FKBP8Q14318 412 aa25.5■■□□□ 1.67
EGFR-209ENST00000463948 INTS5Q6P9B9 1019 aaKnown RBP25.5■■□□□ 1.67
EGFR-209ENST00000463948 DNAJC10Q8IXB1 793 aa25.5■■□□□ 1.67
EGFR-209ENST00000463948 SLC52A2Q9HAB3 445 aa25.5■■□□□ 1.67
EGFR-209ENST00000463948 COL5A3P25940 1745 aaPredicted RBP25.49■■□□□ 1.67
EGFR-209ENST00000463948 PER1O15534 1290 aaPredicted RBP25.49■■□□□ 1.67
EGFR-209ENST00000463948 RNMTO43148 476 aaKnown RBP25.49■■□□□ 1.67
EGFR-209ENST00000463948 FCHSD2O94868 740 aa25.49■■□□□ 1.67
EGFR-209ENST00000463948 ZNF831Q5JPB2 1677 aa25.48■■□□□ 1.67
EGFR-209ENST00000463948 DIAPH1O60610 1272 aaKnown RBP25.48■■□□□ 1.67
EGFR-209ENST00000463948 N4BP2Q86UW6 1770 aaPredicted RBP25.48■■□□□ 1.67
EGFR-209ENST00000463948 MTHFSDQ2M296 383 aaKnown RBP25.47■■□□□ 1.67
EGFR-209ENST00000463948 C10orf71Q711Q0 1435 aa25.46■■□□□ 1.67
EGFR-209ENST00000463948 USP42Q9H9J4 1324 aaKnown RBP25.45■■□□□ 1.66
EGFR-209ENST00000463948 DDR1Q08345 913 aa25.45■■□□□ 1.66
EGFR-209ENST00000463948 KCNA3P22001 575 aa25.44■■□□□ 1.66
EGFR-209ENST00000463948 C4AP0C0L4 1744 aa25.43■■□□□ 1.66
EGFR-209ENST00000463948 ZPR1O75312 459 aa25.43■■□□□ 1.66
EGFR-209ENST00000463948 SCN11AQ9UI33 1791 aa25.43■■□□□ 1.66
EGFR-209ENST00000463948 CYP19A1P11511 503 aaPredicted RBP25.42■■□□□ 1.66
EGFR-209ENST00000463948 USPL1Q5W0Q7 1092 aa25.42■■□□□ 1.66
EGFR-209ENST00000463948 KIF13BQ9NQT8 1826 aa25.42■■□□□ 1.66
EGFR-209ENST00000463948 PIM2Q9P1W9 311 aa25.41■■□□□ 1.66
EGFR-209ENST00000463948 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
EGFR-209ENST00000463948 KIF3CO14782 793 aa25.4■■□□□ 1.66
EGFR-209ENST00000463948 U2SURPO15042 1029 aaKnown RBP25.4■■□□□ 1.66
EGFR-209ENST00000463948 TM4SF1P30408 202 aa25.4■■□□□ 1.66
EGFR-209ENST00000463948 CHRNA5P30532 468 aa25.4■■□□□ 1.66
EGFR-209ENST00000463948 TJP1Q07157 1748 aa25.4■■□□□ 1.66
EGFR-209ENST00000463948 SOS1Q07889 1333 aaPredicted RBP25.38■■□□□ 1.65
EGFR-209ENST00000463948 POLRMTO00411 1230 aaKnown RBP25.38■■□□□ 1.65
EGFR-209ENST00000463948 DALRD3Q5D0E6 543 aaKnown RBP25.38■■□□□ 1.65
EGFR-209ENST00000463948 HSPA6P17066 643 aa25.37■■□□□ 1.65
EGFR-209ENST00000463948 ZBTB1Q9Y2K1 713 aa25.37■■□□□ 1.65
EGFR-209ENST00000463948 CANXP27824 592 aaKnown RBP25.36■■□□□ 1.65
EGFR-209ENST00000463948 C9orf131Q5VYM1 1079 aa25.35■■□□□ 1.65
EGFR-209ENST00000463948 NFIXQ14938 502 aa25.34■■□□□ 1.65
EGFR-209ENST00000463948 NARFQ9UHQ1 456 aa25.34■■□□□ 1.65
EGFR-209ENST00000463948 TTC5Q8N0Z6 440 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms