RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 ITGB4P16144 1822 aa15.69■□□□□ 0.1
RAE1-207ENST00000462438 CT47B1P0C2W7 299 aaPredicted RBP15.69■□□□□ 0.1
RAE1-207ENST00000462438 NHSQ6T4R5 1651 aa15.69■□□□□ 0.1
RAE1-207ENST00000462438 RTF1Q92541 710 aaKnown RBP15.68■□□□□ 0.1
RAE1-207ENST00000462438 DOT1LQ8TEK3 1739 aa15.68■□□□□ 0.1
RAE1-207ENST00000462438 MYH16Q9H6N6 1097 aa15.68■□□□□ 0.1
RAE1-207ENST00000462438 CYP27B1O15528 508 aa15.67■□□□□ 0.1
RAE1-207ENST00000462438 GNAI1P63096 354 aa15.67■□□□□ 0.1
RAE1-207ENST00000462438 CFAP44Q96MT7 982 aa15.67■□□□□ 0.1
RAE1-207ENST00000462438 ERVV-2B6SEH9 535 aa15.67■□□□□ 0.1
RAE1-207ENST00000462438 RNMTO43148 476 aaKnown RBP15.67■□□□□ 0.1
RAE1-207ENST00000462438 EXOC5O00471 708 aa15.66■□□□□ 0.1
RAE1-207ENST00000462438 CHL1O00533 1208 aa15.65■□□□□ 0.1
RAE1-207ENST00000462438 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
RAE1-207ENST00000462438 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
RAE1-207ENST00000462438 SBF2Q86WG5 1849 aa15.65■□□□□ 0.1
RAE1-207ENST00000462438 BRWD3Q6RI45 1802 aa15.65■□□□□ 0.1
RAE1-207ENST00000462438 RBM6P78332 1123 aaKnown RBP15.65■□□□□ 0.1
RAE1-207ENST00000462438 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
RAE1-207ENST00000462438 BRPF3Q9ULD4 1205 aa15.65■□□□□ 0.1
RAE1-207ENST00000462438 LAMB4A4D0S4 1761 aa15.64■□□□□ 0.09
RAE1-207ENST00000462438 DDB1Q16531 1140 aa15.64■□□□□ 0.09
RAE1-207ENST00000462438 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
RAE1-207ENST00000462438 QTRT2Q9H974 415 aaKnown RBP15.63■□□□□ 0.09
RAE1-207ENST00000462438 CACNA1FO60840 1977 aa15.63■□□□□ 0.09
RAE1-207ENST00000462438 TAF7Q15545 349 aaPredicted RBP15.62■□□□□ 0.09
RAE1-207ENST00000462438 HEG1Q9ULI3 1381 aa15.62■□□□□ 0.09
RAE1-207ENST00000462438 RGPD3A6NKT7 1758 aaPredicted RBP15.62■□□□□ 0.09
RAE1-207ENST00000462438 RGPD4Q7Z3J3 1758 aa15.62■□□□□ 0.09
RAE1-207ENST00000462438 SLC52A2Q9HAB3 445 aa15.62■□□□□ 0.09
RAE1-207ENST00000462438 FANCIQ9NVI1 1328 aa15.61■□□□□ 0.09
RAE1-207ENST00000462438 HOXB7P09629 217 aa15.6■□□□□ 0.09
RAE1-207ENST00000462438 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
RAE1-207ENST00000462438 NOP58Q9Y2X3 529 aaKnown RBP15.6■□□□□ 0.09
RAE1-207ENST00000462438 MCM10Q7L590 875 aa15.6■□□□□ 0.09
RAE1-207ENST00000462438 CCDC9Q9Y3X0 531 aaKnown RBP15.6■□□□□ 0.09
RAE1-207ENST00000462438 CHMP4AQ9BY43 222 aa15.59■□□□□ 0.09
RAE1-207ENST00000462438 KCPQ6ZWJ8 1503 aa15.59■□□□□ 0.09
RAE1-207ENST00000462438 FAM98CQ17RN3 349 aaKnown RBP15.59■□□□□ 0.09
RAE1-207ENST00000462438 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.09
RAE1-207ENST00000462438 LGR6Q9HBX8 967 aa15.58■□□□□ 0.08
RAE1-207ENST00000462438 RGS17Q9UGC6 210 aaPredicted RBP15.58■□□□□ 0.08
RAE1-207ENST00000462438 TEFQ10587 303 aa15.58■□□□□ 0.08
RAE1-207ENST00000462438 USP35Q9P2H5 1018 aa15.58■□□□□ 0.08
RAE1-207ENST00000462438 RREB1Q92766 1687 aa15.57■□□□□ 0.08
RAE1-207ENST00000462438 MARCH10Q8NA82 808 aaPredicted RBP15.57■□□□□ 0.08
RAE1-207ENST00000462438 MBIPQ9NS73 344 aa15.57■□□□□ 0.08
RAE1-207ENST00000462438 MPRIPQ6WCQ1 1025 aa15.57■□□□□ 0.08
RAE1-207ENST00000462438 CDCA7LQ96GN5 454 aa15.57■□□□□ 0.08
RAE1-207ENST00000462438 LY75O60449 1722 aa15.57■□□□□ 0.08
RAE1-207ENST00000462438 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
RAE1-207ENST00000462438 RGS12O14924 1447 aa15.56■□□□□ 0.08
RAE1-207ENST00000462438 DCTN1Q14203 1278 aa15.56■□□□□ 0.08
RAE1-207ENST00000462438 SEPT12Q8IYM1 358 aa15.55■□□□□ 0.08
RAE1-207ENST00000462438 BTAF1O14981 1849 aa15.55■□□□□ 0.08
RAE1-207ENST00000462438 RNF123Q5XPI4 1314 aa15.55■□□□□ 0.08
RAE1-207ENST00000462438 C5P01031 1676 aa15.55■□□□□ 0.08
RAE1-207ENST00000462438 RXRBP28702 533 aa15.55■□□□□ 0.08
RAE1-207ENST00000462438 ILDR1Q86SU0 546 aaPredicted RBP15.55■□□□□ 0.08
RAE1-207ENST00000462438 THUMPD2Q9BTF0 503 aaKnown RBP15.55■□□□□ 0.08
RAE1-207ENST00000462438 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
RAE1-207ENST00000462438 TSPYL4Q9UJ04 414 aa15.54■□□□□ 0.08
RAE1-207ENST00000462438 TJP1Q07157 1748 aa15.54■□□□□ 0.08
RAE1-207ENST00000462438 CABP4P57796 275 aa15.53■□□□□ 0.08
RAE1-207ENST00000462438 ALDH1L2Q3SY69 923 aa15.53■□□□□ 0.08
RAE1-207ENST00000462438 N4BP2Q86UW6 1770 aaPredicted RBP15.53■□□□□ 0.08
RAE1-207ENST00000462438 COL5A3P25940 1745 aaPredicted RBP15.53■□□□□ 0.08
RAE1-207ENST00000462438 BTBD11A6QL63 1104 aa15.53■□□□□ 0.08
RAE1-207ENST00000462438 DDX54Q8TDD1 881 aaKnown RBP15.53■□□□□ 0.08
RAE1-207ENST00000462438 EIF4A1P60842 406 aaKnown RBP15.52■□□□□ 0.08
RAE1-207ENST00000462438 TNS1Q9HBL0 1735 aaKnown RBP15.52■□□□□ 0.07
RAE1-207ENST00000462438 ZNF790Q6PG37 636 aa15.51■□□□□ 0.07
RAE1-207ENST00000462438 TMOD3Q9NYL9 352 aa15.51■□□□□ 0.07
RAE1-207ENST00000462438 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
RAE1-207ENST00000462438 ERBB4Q15303 1308 aa15.5■□□□□ 0.07
RAE1-207ENST00000462438 FAM196AQ6ZSG2 479 aa15.5■□□□□ 0.07
RAE1-207ENST00000462438 KRT27Q7Z3Y8 459 aa15.5■□□□□ 0.07
RAE1-207ENST00000462438 NFATC2IPQ8NCF5 419 aa15.5■□□□□ 0.07
RAE1-207ENST00000462438 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
RAE1-207ENST00000462438 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
RAE1-207ENST00000462438 POTEAQ6S8J7 498 aa15.49■□□□□ 0.07
RAE1-207ENST00000462438 TSR2Q969E8 191 aaKnown RBP15.49■□□□□ 0.07
RAE1-207ENST00000462438 VAMP4O75379 141 aa15.49■□□□□ 0.07
RAE1-207ENST00000462438 PIGBQ92521 554 aa15.48■□□□□ 0.07
RAE1-207ENST00000462438 FMNL2Q96PY5 1086 aa15.48■□□□□ 0.07
RAE1-207ENST00000462438 GLIPR1L2Q4G1C9 344 aa15.48■□□□□ 0.07
RAE1-207ENST00000462438 RCAN3Q9UKA8 241 aa15.48■□□□□ 0.07
RAE1-207ENST00000462438 TWISTNBQ3B726 338 aaPredicted RBP15.47■□□□□ 0.07
RAE1-207ENST00000462438 TEX13AQ9BXU3 409 aaPredicted RBP15.47■□□□□ 0.07
RAE1-207ENST00000462438 IBTKQ9P2D0 1353 aaPredicted RBP15.47■□□□□ 0.07
RAE1-207ENST00000462438 TAF1LQ8IZX4 1826 aa15.47■□□□□ 0.07
RAE1-207ENST00000462438 PDE4CQ08493 712 aa15.46■□□□□ 0.07
RAE1-207ENST00000462438 TTC5Q8N0Z6 440 aa15.46■□□□□ 0.07
RAE1-207ENST00000462438 BCL11BQ9C0K0 894 aaPredicted RBP15.46■□□□□ 0.07
RAE1-207ENST00000462438 GIGYF1O75420 1035 aaPredicted RBP15.46■□□□□ 0.07
RAE1-207ENST00000462438 RARSP54136 660 aaKnown RBP15.46■□□□□ 0.07
RAE1-207ENST00000462438 NPM2Q86SE8 214 aaKnown RBP15.46■□□□□ 0.07
RAE1-207ENST00000462438 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.06
RAE1-207ENST00000462438 ATG3Q9NT62 314 aa15.46■□□□□ 0.06
RAE1-207ENST00000462438 SNRPA1P09661 255 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms