RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 CARD14Q9BXL6 1004 aa15.12■□□□□ 0.01
CBX3-205ENST00000462165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.015e-12■■■□□ 16.8
CBX3-205ENST00000462165 ITPK1Q13572 414 aa15.11■□□□□ 0.01
CBX3-205ENST00000462165 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
CBX3-205ENST00000462165 WWC3Q9ULE0 1092 aa15.11■□□□□ 0.01
CBX3-205ENST00000462165 ZNF831Q5JPB2 1677 aa15.11■□□□□ 0.01
CBX3-205ENST00000462165 WASHC2AQ641Q2 1341 aa15.11■□□□□ 0.01
CBX3-205ENST00000462165 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
CBX3-205ENST00000462165 GNPATO15228 680 aa15.1■□□□□ 0.01
CBX3-205ENST00000462165 IFNL2Q8IZJ0 200 aa15.1■□□□□ 0.01
CBX3-205ENST00000462165 EYA1Q99502 592 aa15.1■□□□□ 0.01
CBX3-205ENST00000462165 ASAP1Q9ULH1 1129 aa15.1■□□□□ 0.01
CBX3-205ENST00000462165 KIF3CO14782 793 aa15.09■□□□□ 0.01
CBX3-205ENST00000462165 PHKG2P15735 406 aa15.09■□□□□ 0.01
CBX3-205ENST00000462165 ATP6V1AP38606 617 aa15.09■□□□□ 0.01
CBX3-205ENST00000462165 PXDNLA1KZ92 1463 aa15.08■□□□□ 0.01
CBX3-205ENST00000462165 BRCA1P38398 1863 aaKnown RBP15.08■□□□□ 0.01
CBX3-205ENST00000462165 PPM1GO15355 546 aaPredicted RBP15.08■□□□□ 0
CBX3-205ENST00000462165 ATG3Q9NT62 314 aa15.08■□□□□ 0
CBX3-205ENST00000462165 COL5A3P25940 1745 aaPredicted RBP15.08■□□□□ 0
CBX3-205ENST00000462165 PLEKHG2Q9H7P9 1386 aa15.08■□□□□ 0
CBX3-205ENST00000462165 MMP10P09238 476 aa15.07■□□□□ 0
CBX3-205ENST00000462165 KDRP35968 1356 aa15.07■□□□□ 0
CBX3-205ENST00000462165 TGFB2P61812 414 aa15.06■□□□□ 0
CBX3-205ENST00000462165 POLKQ9UBT6 870 aa15.05■□□□□ -0
CBX3-205ENST00000462165 RTCBQ9Y3I0 505 aaKnown RBP15.05■□□□□ -0
CBX3-205ENST00000462165 C10orf71Q711Q0 1435 aa15.05■□□□□ -0
CBX3-205ENST00000462165 C4AP0C0L4 1744 aa15.05■□□□□ -0
CBX3-205ENST00000462165 ARFGEF1Q9Y6D6 1849 aa15.04■□□□□ -0
CBX3-205ENST00000462165 TRAPPC3LQ5T215 181 aa15.04■□□□□ -0
CBX3-205ENST00000462165 RC3H1Q5TC82 1133 aaKnown RBP15.04■□□□□ -0
CBX3-205ENST00000462165 NLGN1Q8N2Q7 840 aa15.04■□□□□ -0
CBX3-205ENST00000462165 MYH14Q7Z406 1995 aaKnown RBP15.04■□□□□ -0
CBX3-205ENST00000462165 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
CBX3-205ENST00000462165 BCS1LQ9Y276 419 aa15.03■□□□□ -0
CBX3-205ENST00000462165 ERVV-2B6SEH9 535 aa15.02■□□□□ -0
CBX3-205ENST00000462165 TOMM70O94826 608 aa15.02■□□□□ -0
CBX3-205ENST00000462165 APLP1P51693 650 aa15.02■□□□□ -0
CBX3-205ENST00000462165 EIF4A2Q14240 407 aaKnown RBP15.02■□□□□ -0
CBX3-205ENST00000462165 ARHGEF1Q92888 912 aaKnown RBP15.02■□□□□ -0
CBX3-205ENST00000462165 CNTNAP4Q9C0A0 1308 aa15.01□□□□□ -0.01
CBX3-205ENST00000462165 A0A0G2JLW4 131 aa15.01□□□□□ -0.01
CBX3-205ENST00000462165 CCDC87Q9NVE4 849 aa15.01□□□□□ -0.01
CBX3-205ENST00000462165 RPS6KA4O75676 772 aa15□□□□□ -0.01
CBX3-205ENST00000462165 HSP90AB1P08238 724 aaKnown RBP15□□□□□ -0.01
CBX3-205ENST00000462165 GYS1P13807 737 aa15□□□□□ -0.01
CBX3-205ENST00000462165 DCAF5Q96JK2 942 aa15□□□□□ -0.01
CBX3-205ENST00000462165 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
CBX3-205ENST00000462165 DPEP1P16444 411 aa14.99□□□□□ -0.01
CBX3-205ENST00000462165 RFC4P35249 363 aa14.99□□□□□ -0.01
CBX3-205ENST00000462165 ARHGAP27Q6ZUM4 889 aa14.99□□□□□ -0.01
CBX3-205ENST00000462165 DNAJC5GQ8N7S2 189 aa14.99□□□□□ -0.01
CBX3-205ENST00000462165 WDR90Q96KV7 1748 aa14.99□□□□□ -0.01
CBX3-205ENST00000462165 FCHSD2O94868 740 aa14.98□□□□□ -0.01
CBX3-205ENST00000462165 KCNA3P22001 575 aa14.98□□□□□ -0.01
CBX3-205ENST00000462165 PARP3Q9Y6F1 533 aa14.98□□□□□ -0.01
CBX3-205ENST00000462165 KDM6AO15550 1401 aaPredicted RBP14.98□□□□□ -0.01
CBX3-205ENST00000462165 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
CBX3-205ENST00000462165 NMRK2Q9NPI5 230 aa14.97□□□□□ -0.01
CBX3-205ENST00000462165 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
CBX3-205ENST00000462165 SBF1O95248 1867 aa14.96□□□□□ -0.01
CBX3-205ENST00000462165 TJP1Q07157 1748 aa14.96□□□□□ -0.01
CBX3-205ENST00000462165 AMOTQ4VCS5 1084 aa14.96□□□□□ -0.01
CBX3-205ENST00000462165 PCNTO95613 3336 aa14.95□□□□□ -0.02
CBX3-205ENST00000462165 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
CBX3-205ENST00000462165 CABP4P57796 275 aa14.95□□□□□ -0.02
CBX3-205ENST00000462165 C9orf131Q5VYM1 1079 aa14.95□□□□□ -0.02
CBX3-205ENST00000462165 ZNF530Q6P9A1 599 aaPredicted RBP14.95□□□□□ -0.02
CBX3-205ENST00000462165 RBM46Q8TBY0 533 aaKnown RBP14.95□□□□□ -0.02
CBX3-205ENST00000462165 SCN11AQ9UI33 1791 aa14.95□□□□□ -0.02
CBX3-205ENST00000462165 ADAMTS7Q9UKP4 1686 aa14.94□□□□□ -0.02
CBX3-205ENST00000462165 PIM2Q9P1W9 311 aa14.94□□□□□ -0.02
CBX3-205ENST00000462165 TNRC6CQ9HCJ0 1690 aaKnown RBP14.93□□□□□ -0.02
CBX3-205ENST00000462165 CRKLP46109 303 aaKnown RBP14.93□□□□□ -0.02
CBX3-205ENST00000462165 TIMELESSQ9UNS1 1208 aa14.93□□□□□ -0.02
CBX3-205ENST00000462165 USP42Q9H9J4 1324 aaKnown RBP14.92□□□□□ -0.02
CBX3-205ENST00000462165 PTCD1O75127 700 aaKnown RBP14.92□□□□□ -0.02
CBX3-205ENST00000462165 MTHFSP49914 203 aa14.92□□□□□ -0.02
CBX3-205ENST00000462165 SRP68Q9UHB9 627 aaKnown RBP14.92□□□□□ -0.02
CBX3-205ENST00000462165 KCPQ6ZWJ8 1503 aa14.92□□□□□ -0.02
CBX3-205ENST00000462165 DDR1Q08345 913 aa14.91□□□□□ -0.02
CBX3-205ENST00000462165 FSTL1Q12841 308 aa14.91□□□□□ -0.02
CBX3-205ENST00000462165 FKBP8Q14318 412 aa14.91□□□□□ -0.02
CBX3-205ENST00000462165 DALRD3Q5D0E6 543 aaKnown RBP14.91□□□□□ -0.02
CBX3-205ENST00000462165 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
CBX3-205ENST00000462165 C16orf71Q8IYS4 520 aaPredicted RBP14.91□□□□□ -0.02
CBX3-205ENST00000462165 NFATC2IPQ8NCF5 419 aa14.91□□□□□ -0.02
CBX3-205ENST00000462165 VIRMAQ69YN4 1812 aaKnown RBP14.91□□□□□ -0.02
CBX3-205ENST00000462165 KDM2BQ8NHM5 1336 aa14.91□□□□□ -0.02
CBX3-205ENST00000462165 AFDNP55196 1824 aaKnown RBP14.9□□□□□ -0.02
CBX3-205ENST00000462165 AEBP1Q8IUX7 1158 aa14.9□□□□□ -0.02
CBX3-205ENST00000462165 POLR3GLQ9BT43 218 aa14.9□□□□□ -0.02
CBX3-205ENST00000462165 TM4SF1P30408 202 aa14.89□□□□□ -0.03
CBX3-205ENST00000462165 KLRG1Q96E93 195 aa14.89□□□□□ -0.03
CBX3-205ENST00000462165 RNF181Q9P0P0 153 aa14.89□□□□□ -0.03
CBX3-205ENST00000462165 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
CBX3-205ENST00000462165 POLRMTO00411 1230 aaKnown RBP14.88□□□□□ -0.03
CBX3-205ENST00000462165 CHRNA5P30532 468 aa14.88□□□□□ -0.03
CBX3-205ENST00000462165 INTS5Q6P9B9 1019 aaKnown RBP14.88□□□□□ -0.03
CBX3-205ENST00000462165 JMYQ8N9B5 988 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms