RNA–Protein interactions for RNA: ENST00000461370.1

CCT4-202, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2

Gene CCT4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-202ENST00000461370 PCDHGA11Q9Y5H2 935 aa8.12□□□□□ -1.11
CCT4-202ENST00000461370 ITGA6P23229 1130 aa8.11□□□□□ -1.11
CCT4-202ENST00000461370 ATP1A2P50993 1020 aa8.11□□□□□ -1.11
CCT4-202ENST00000461370 POU4F2Q12837 409 aa8.11□□□□□ -1.11
CCT4-202ENST00000461370 GNASQ5JWF2 1037 aa8.11□□□□□ -1.11
CCT4-202ENST00000461370 PALM3A6NDB9 673 aaPredicted RBP8.1□□□□□ -1.11
CCT4-202ENST00000461370 TMEM229AB2RXF0 380 aa8.1□□□□□ -1.11
CCT4-202ENST00000461370 WIPF1O43516 503 aa8.1□□□□□ -1.11
CCT4-202ENST00000461370 WDR44Q5JSH3 913 aa8.1□□□□□ -1.11
CCT4-202ENST00000461370 TMEM214Q6NUQ4 689 aaKnown RBP8.1□□□□□ -1.11
CCT4-202ENST00000461370 TFIP11Q9UBB9 837 aaKnown RBP8.1□□□□□ -1.11
CCT4-202ENST00000461370 ZNF777Q9ULD5 760 aaPredicted RBP8.1□□□□□ -1.11
CCT4-202ENST00000461370 MAFBQ9Y5Q3 323 aaPredicted RBP8.1□□□□□ -1.11
CCT4-202ENST00000461370 GMPRP36959 345 aa8.09□□□□□ -1.11
CCT4-202ENST00000461370 PPP1R12CQ9BZL4 782 aa8.09□□□□□ -1.11
CCT4-202ENST00000461370 ZMYND15Q9H091 742 aa8.09□□□□□ -1.11
CCT4-202ENST00000461370 DYRK1BQ9Y463 629 aa8.09□□□□□ -1.11
CCT4-202ENST00000461370 CDC14CA4D256 554 aa8.08□□□□□ -1.12
CCT4-202ENST00000461370 SMTNP53814 917 aa8.08□□□□□ -1.12
CCT4-202ENST00000461370 PPARGC1BQ86YN6 1023 aaKnown RBP8.08□□□□□ -1.12
CCT4-202ENST00000461370 RHBDD1Q8TEB9 315 aa8.08□□□□□ -1.12
CCT4-202ENST00000461370 NANOS1Q8WY41 292 aaKnown RBP8.08□□□□□ -1.12
CCT4-202ENST00000461370 TIMMDC1Q9NPL8 285 aa8.08□□□□□ -1.12
CCT4-202ENST00000461370 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
CCT4-202ENST00000461370 SERTAD1Q9UHV2 236 aa8.08□□□□□ -1.12
CCT4-202ENST00000461370 BACH1O14867 736 aa8.07□□□□□ -1.12
CCT4-202ENST00000461370 CLDN10P78369 228 aa8.07□□□□□ -1.12
CCT4-202ENST00000461370 DNAAF2Q9NVR5 837 aaKnown RBP8.07□□□□□ -1.12
CCT4-202ENST00000461370 ZNF358Q9NW07 568 aa8.07□□□□□ -1.12
CCT4-202ENST00000461370 KIAA1024Q9UPX6 916 aa8.07□□□□□ -1.12
CCT4-202ENST00000461370 PHKA2P46019 1235 aa8.06□□□□□ -1.12
CCT4-202ENST00000461370 C4orf17Q53FE4 359 aa8.06□□□□□ -1.12
CCT4-202ENST00000461370 RIPOR1Q6ZS17 1223 aa8.06□□□□□ -1.12
CCT4-202ENST00000461370 OGFOD1Q8N543 542 aa8.06□□□□□ -1.12
CCT4-202ENST00000461370 TPCN2Q8NHX9 752 aa8.06□□□□□ -1.12
CCT4-202ENST00000461370 SLC4A9Q96Q91 983 aa8.06□□□□□ -1.12
CCT4-202ENST00000461370 GAS2L1Q99501 681 aaPredicted RBP8.06□□□□□ -1.12
CCT4-202ENST00000461370 A0A1B0GTH6 734 aa8.05□□□□□ -1.12
CCT4-202ENST00000461370 A6NJY4 79 aa8.05□□□□□ -1.12
CCT4-202ENST00000461370 MTFR1Q15390 333 aa8.05□□□□□ -1.12
CCT4-202ENST00000461370 SV2AQ7L0J3 742 aa8.05□□□□□ -1.12
CCT4-202ENST00000461370 LARGE2Q8N3Y3 721 aa8.05□□□□□ -1.12
CCT4-202ENST00000461370 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.05□□□□□ -1.122e-7■■■□□ 15.6
CCT4-202ENST00000461370 CUEDC1Q9NWM3 386 aaPredicted RBP8.05□□□□□ -1.12
CCT4-202ENST00000461370 CC2D2AQ9P2K1 1620 aa8.04□□□□□ -1.12
CCT4-202ENST00000461370 H7C1W4 665 aa8.04□□□□□ -1.12
CCT4-202ENST00000461370 LMOD1P29536 600 aaPredicted RBP8.04□□□□□ -1.12
CCT4-202ENST00000461370 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
CCT4-202ENST00000461370 INSM1Q01101 510 aaPredicted RBP8.04□□□□□ -1.12
CCT4-202ENST00000461370 CCDC102BQ68D86 513 aa8.04□□□□□ -1.12
CCT4-202ENST00000461370 TRIM22Q8IYM9 498 aa8.04□□□□□ -1.12
CCT4-202ENST00000461370 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
CCT4-202ENST00000461370 GMCL1Q96IK5 515 aa8.04□□□□□ -1.12
CCT4-202ENST00000461370 ZNF594Q96JF6 807 aaPredicted RBP8.04□□□□□ -1.12
CCT4-202ENST00000461370 NIFKQ9BYG3 293 aaKnown RBP8.04□□□□□ -1.12
CCT4-202ENST00000461370 RBM19Q9Y4C8 960 aaKnown RBP8.04□□□□□ -1.12
CCT4-202ENST00000461370 F11P03951 625 aa8.03□□□□□ -1.12
CCT4-202ENST00000461370 RASA1P20936 1047 aa8.03□□□□□ -1.12
CCT4-202ENST00000461370 SIX5Q8N196 739 aa8.03□□□□□ -1.12
CCT4-202ENST00000461370 ZNF837Q96EG3 531 aaPredicted RBP8.03□□□□□ -1.12
CCT4-202ENST00000461370 IQSEC3Q9UPP2 1182 aaPredicted RBP8.03□□□□□ -1.12
CCT4-202ENST00000461370 CDK2AP1O14519 115 aa8.02□□□□□ -1.13
CCT4-202ENST00000461370 ZBTB7BO15156 539 aaPredicted RBP8.02□□□□□ -1.13
CCT4-202ENST00000461370 GPR161Q8N6U8 529 aaKnown RBP8.02□□□□□ -1.13
CCT4-202ENST00000461370 GPAMQ9HCL2 828 aa8.02□□□□□ -1.13
CCT4-202ENST00000461370 EPHA4P54764 986 aa8.01□□□□□ -1.13
CCT4-202ENST00000461370 CFAP70Q5T0N1 1121 aa8.01□□□□□ -1.13
CCT4-202ENST00000461370 LARP1Q6PKG0 1096 aaKnown RBP8.01□□□□□ -1.13
CCT4-202ENST00000461370 SCHIP1Q9P0W5 487 aaPredicted RBP8.01□□□□□ -1.13
CCT4-202ENST00000461370 USP3Q9Y6I4 520 aa8.01□□□□□ -1.13
CCT4-202ENST00000461370 M0R2N6 131 aa8□□□□□ -1.13
CCT4-202ENST00000461370 CSB-PGBD3P0DP91 1061 aa8□□□□□ -1.13
CCT4-202ENST00000461370 NBPF1Q3BBV0 1214 aa8□□□□□ -1.13
CCT4-202ENST00000461370 CRTC2Q53ET0 693 aaPredicted RBP8□□□□□ -1.13
CCT4-202ENST00000461370 KANK4Q5T7N3 995 aaPredicted RBP8□□□□□ -1.13
CCT4-202ENST00000461370 FOXR1Q6PIV2 292 aa8□□□□□ -1.13
CCT4-202ENST00000461370 C14orf37Q86TY3 774 aa8□□□□□ -1.13
CCT4-202ENST00000461370 ZNF295-AS1Q8N0V1 137 aa8□□□□□ -1.13
CCT4-202ENST00000461370 PGBD3Q8N328 593 aa8□□□□□ -1.13
CCT4-202ENST00000461370 COL25A1Q9BXS0 654 aaPredicted RBP8□□□□□ -1.13
CCT4-202ENST00000461370 NUCKS1Q9H1E3 243 aaKnown RBP8□□□□□ -1.13
CCT4-202ENST00000461370 VRTNQ9H8Y1 702 aa8□□□□□ -1.13
CCT4-202ENST00000461370 CABP1Q9NZU7 370 aa8□□□□□ -1.13
CCT4-202ENST00000461370 FAM196BA6NMK8 535 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L15C9J2P7 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L10C9JJH3 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L13C9JLJ4 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L12C9JPN9 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L11C9JVI0 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L21D6R901 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L18D6R9N7 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L22D6RA61 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L17D6RBQ6 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L19D6RCP7 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L20D6RJB6 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 MSX1P28360 303 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 FOXK2Q01167 660 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 KRT76Q01546 638 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 USP17L24Q0WX57 530 aa7.99□□□□□ -1.13
CCT4-202ENST00000461370 DBN1Q16643 649 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms