RNA–Protein interactions for RNA: ENST00000461049.1

AC008040.2-201, humanhuman

BASIC

Gene AC008040.2, Length 708 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008040.2-201ENST00000461049 SENP3-EIF4A1A0A087X0R7 540 aa25.44■■□□□ 1.66
AC008040.2-201ENST00000461049 SLC39A6Q13433 755 aa25.44■■□□□ 1.66
AC008040.2-201ENST00000461049 RIPK4P57078 832 aa25.43■■□□□ 1.66
AC008040.2-201ENST00000461049 HTATSF1O43719 755 aaKnown RBP25.42■■□□□ 1.66
AC008040.2-201ENST00000461049 NEFMP07197 916 aa25.42■■□□□ 1.66
AC008040.2-201ENST00000461049 NEUROD2Q15784 382 aa25.42■■□□□ 1.66
AC008040.2-201ENST00000461049 APAF1O14727 1248 aa25.41■■□□□ 1.66
AC008040.2-201ENST00000461049 SMARCC1Q92922 1105 aaPredicted RBP25.41■■□□□ 1.66
AC008040.2-201ENST00000461049 CCNL1Q9UK58 526 aaPredicted RBP25.41■■□□□ 1.66
AC008040.2-201ENST00000461049 ADAMTS7Q9UKP4 1686 aa25.41■■□□□ 1.66
AC008040.2-201ENST00000461049 MRC1P22897 1456 aa25.4■■□□□ 1.66
AC008040.2-201ENST00000461049 KCNQ3O43525 872 aa25.4■■□□□ 1.66
AC008040.2-201ENST00000461049 RTF1Q92541 710 aaKnown RBP25.4■■□□□ 1.66
AC008040.2-201ENST00000461049 TRIM35Q9UPQ4 493 aa25.4■■□□□ 1.66
AC008040.2-201ENST00000461049 ITGB4P16144 1822 aa25.4■■□□□ 1.66
AC008040.2-201ENST00000461049 LOC102724428A0A0B4J2F2 783 aa25.39■■□□□ 1.66
AC008040.2-201ENST00000461049 SIK1P57059 783 aa25.39■■□□□ 1.66
AC008040.2-201ENST00000461049 ITPK1Q13572 414 aa25.39■■□□□ 1.66
AC008040.2-201ENST00000461049 SLC27A3Q5K4L6 730 aa25.39■■□□□ 1.66
AC008040.2-201ENST00000461049 PSDA5PKW4 1024 aaPredicted RBP25.38■■□□□ 1.65
AC008040.2-201ENST00000461049 ZNF827Q17R98 1081 aa25.38■■□□□ 1.65
AC008040.2-201ENST00000461049 FAM9BQ8IZU0 186 aa25.38■■□□□ 1.65
AC008040.2-201ENST00000461049 PTCD1O75127 700 aaKnown RBP25.37■■□□□ 1.65
AC008040.2-201ENST00000461049 TEFQ10587 303 aa25.37■■□□□ 1.65
AC008040.2-201ENST00000461049 R3HDM1Q15032 1099 aaKnown RBP25.37■■□□□ 1.65
AC008040.2-201ENST00000461049 MIS18AQ9NYP9 233 aa25.37■■□□□ 1.65
AC008040.2-201ENST00000461049 RBM42Q9BTD8 480 aaKnown RBP25.36■■□□□ 1.65
AC008040.2-201ENST00000461049 CCER2I3L3R5 266 aa25.35■■□□□ 1.65
AC008040.2-201ENST00000461049 AKT1S1Q96B36 256 aa25.35■■□□□ 1.65
AC008040.2-201ENST00000461049 SCN11AQ9UI33 1791 aa25.35■■□□□ 1.65
AC008040.2-201ENST00000461049 RREB1Q92766 1687 aa25.35■■□□□ 1.65
AC008040.2-201ENST00000461049 LINC00116Q8NCU8 138 aa25.34■■□□□ 1.65
AC008040.2-201ENST00000461049 ATP6V1AP38606 617 aa25.33■■□□□ 1.65
AC008040.2-201ENST00000461049 PDGFDQ9GZP0 370 aaPredicted RBP25.33■■□□□ 1.65
AC008040.2-201ENST00000461049 RGPD3A6NKT7 1758 aaPredicted RBP25.32■■□□□ 1.64
AC008040.2-201ENST00000461049 RGPD4Q7Z3J3 1758 aa25.32■■□□□ 1.64
AC008040.2-201ENST00000461049 BTBD11A6QL63 1104 aa25.32■■□□□ 1.64
AC008040.2-201ENST00000461049 SLC15A2Q16348 729 aa25.32■■□□□ 1.64
AC008040.2-201ENST00000461049 NBPF14Q5TI25 921 aa25.32■■□□□ 1.64
AC008040.2-201ENST00000461049 SMIM5Q71RC9 77 aa25.32■■□□□ 1.64
AC008040.2-201ENST00000461049 NUP188Q5SRE5 1749 aa25.32■■□□□ 1.64
AC008040.2-201ENST00000461049 TAF7Q15545 349 aaPredicted RBP25.31■■□□□ 1.64
AC008040.2-201ENST00000461049 ZNF790Q6PG37 636 aa25.31■■□□□ 1.64
AC008040.2-201ENST00000461049 AMIGO3Q86WK7 504 aa25.31■■□□□ 1.64
AC008040.2-201ENST00000461049 ZNF496Q96IT1 587 aaPredicted RBP25.31■■□□□ 1.64
AC008040.2-201ENST00000461049 LY75O60449 1722 aa25.29■■□□□ 1.64
AC008040.2-201ENST00000461049 STK32BQ9NY57 414 aa25.29■■□□□ 1.64
AC008040.2-201ENST00000461049 PAPPAQ13219 1627 aa25.28■■□□□ 1.64
AC008040.2-201ENST00000461049 DNAJC10Q8IXB1 793 aa25.28■■□□□ 1.64
AC008040.2-201ENST00000461049 KCPQ6ZWJ8 1503 aa25.27■■□□□ 1.64
AC008040.2-201ENST00000461049 PRAMEF22A3QJZ6 481 aa25.25■■□□□ 1.63
AC008040.2-201ENST00000461049 LMOD3Q0VAK6 560 aa25.25■■□□□ 1.63
AC008040.2-201ENST00000461049 TTC5Q8N0Z6 440 aa25.24■■□□□ 1.63
AC008040.2-201ENST00000461049 SALL2Q9Y467 1007 aaPredicted RBP25.24■■□□□ 1.63
AC008040.2-201ENST00000461049 DLG5Q8TDM6 1919 aa25.23■■□□□ 1.63
AC008040.2-201ENST00000461049 SIPA1L3O60292 1781 aaPredicted RBP25.21■■□□□ 1.63
AC008040.2-201ENST00000461049 PNPLA7Q6ZV29 1317 aa25.21■■□□□ 1.63
AC008040.2-201ENST00000461049 CYP19A1P11511 503 aaPredicted RBP25.21■■□□□ 1.63
AC008040.2-201ENST00000461049 INTS5Q6P9B9 1019 aaKnown RBP25.21■■□□□ 1.63
AC008040.2-201ENST00000461049 TFCP2L1Q9NZI6 479 aa25.21■■□□□ 1.63
AC008040.2-201ENST00000461049 HEG1Q9ULI3 1381 aa25.2■■□□□ 1.63
AC008040.2-201ENST00000461049 CHL1O00533 1208 aa25.2■■□□□ 1.62
AC008040.2-201ENST00000461049 EIF4A1P60842 406 aaKnown RBP25.2■■□□□ 1.62
AC008040.2-201ENST00000461049 COL23A1Q86Y22 540 aaPredicted RBP25.2■■□□□ 1.62
AC008040.2-201ENST00000461049 WWC1Q8IX03 1113 aa25.2■■□□□ 1.62
AC008040.2-201ENST00000461049 VSIG10Q8N0Z9 540 aa25.2■■□□□ 1.62
AC008040.2-201ENST00000461049 FMNL2Q96PY5 1086 aa25.2■■□□□ 1.62
AC008040.2-201ENST00000461049 ZNF853P0CG23 659 aa25.19■■□□□ 1.62
AC008040.2-201ENST00000461049 TSPYL4Q9UJ04 414 aa25.19■■□□□ 1.62
AC008040.2-201ENST00000461049 CRKLP46109 303 aaKnown RBP25.18■■□□□ 1.62
AC008040.2-201ENST00000461049 CCDC27Q2M243 656 aa25.18■■□□□ 1.62
AC008040.2-201ENST00000461049 RC3H1Q5TC82 1133 aaKnown RBP25.18■■□□□ 1.62
AC008040.2-201ENST00000461049 AK7Q96M32 723 aa25.18■■□□□ 1.62
AC008040.2-201ENST00000461049 LAS1LQ9Y4W2 734 aaKnown RBP25.18■■□□□ 1.62
AC008040.2-201ENST00000461049 USP16Q9Y5T5 823 aa25.18■■□□□ 1.62
AC008040.2-201ENST00000461049 VIRMAQ69YN4 1812 aaKnown RBP25.17■■□□□ 1.62
AC008040.2-201ENST00000461049 GNPATO15228 680 aa25.17■■□□□ 1.62
AC008040.2-201ENST00000461049 CNTNAP4Q9C0A0 1308 aa25.16■■□□□ 1.62
AC008040.2-201ENST00000461049 KRT24Q2M2I5 525 aa25.16■■□□□ 1.62
AC008040.2-201ENST00000461049 PHF14O94880 888 aa25.15■■□□□ 1.62
AC008040.2-201ENST00000461049 NCBP3Q53F19 620 aaKnown RBP25.15■■□□□ 1.62
AC008040.2-201ENST00000461049 BABAM1Q9NWV8 329 aa25.15■■□□□ 1.62
AC008040.2-201ENST00000461049 SRCAPQ6ZRS2 3230 aa25.15■■□□□ 1.62
AC008040.2-201ENST00000461049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.14■■□□□ 1.62
AC008040.2-201ENST00000461049 GIGYF1O75420 1035 aaPredicted RBP25.14■■□□□ 1.62
AC008040.2-201ENST00000461049 CFAP44Q96MT7 982 aa25.14■■□□□ 1.62
AC008040.2-201ENST00000461049 ZBTB1Q9Y2K1 713 aa25.14■■□□□ 1.62
AC008040.2-201ENST00000461049 C4BP0C0L5 1744 aa25.14■■□□□ 1.61
AC008040.2-201ENST00000461049 RPS6KA4O75676 772 aa25.13■■□□□ 1.61
AC008040.2-201ENST00000461049 ZBTB7AO95365 584 aa25.13■■□□□ 1.61
AC008040.2-201ENST00000461049 A1BGP04217 495 aa25.13■■□□□ 1.61
AC008040.2-201ENST00000461049 SNRPA1P09661 255 aaKnown RBP25.13■■□□□ 1.61
AC008040.2-201ENST00000461049 MBIPQ9NS73 344 aa25.13■■□□□ 1.61
AC008040.2-201ENST00000461049 CCDC87Q9NVE4 849 aa25.13■■□□□ 1.61
AC008040.2-201ENST00000461049 TJP1Q07157 1748 aa25.12■■□□□ 1.61
AC008040.2-201ENST00000461049 C5P01031 1676 aa25.12■■□□□ 1.61
AC008040.2-201ENST00000461049 UBR2Q8IWV8 1755 aa25.12■■□□□ 1.61
AC008040.2-201ENST00000461049 PIP4K2AP48426 406 aaPredicted RBP25.11■■□□□ 1.61
AC008040.2-201ENST00000461049 SPINK5Q9NQ38 1064 aaPredicted RBP25.11■■□□□ 1.61
AC008040.2-201ENST00000461049 IFT57Q9NWB7 429 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms