RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 BRWD3Q6RI45 1802 aa21.52■■□□□ 1.04
YIPF3-205ENST00000460547 ERBB3P21860 1342 aa21.52■■□□□ 1.04
YIPF3-205ENST00000460547 PCDHB15Q9Y5E8 787 aa21.52■■□□□ 1.04
YIPF3-205ENST00000460547 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
YIPF3-205ENST00000460547 SKAP1Q86WV1 359 aa21.51■■□□□ 1.03
YIPF3-205ENST00000460547 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
YIPF3-205ENST00000460547 CDCA7Q9BWT1 371 aaPredicted RBP21.51■■□□□ 1.03
YIPF3-205ENST00000460547 LTN1O94822 1766 aa21.51■■□□□ 1.03
YIPF3-205ENST00000460547 CHL1O00533 1208 aa21.5■■□□□ 1.03
YIPF3-205ENST00000460547 MSH5O43196 834 aa21.5■■□□□ 1.03
YIPF3-205ENST00000460547 TWISTNBQ3B726 338 aaPredicted RBP21.5■■□□□ 1.03
YIPF3-205ENST00000460547 TSPYL6Q8N831 410 aa21.5■■□□□ 1.03
YIPF3-205ENST00000460547 GAS2L2Q8NHY3 880 aa21.5■■□□□ 1.03
YIPF3-205ENST00000460547 LTV1Q96GA3 475 aaPredicted RBP21.5■■□□□ 1.03
YIPF3-205ENST00000460547 THSD7AQ9UPZ6 1657 aa21.5■■□□□ 1.03
YIPF3-205ENST00000460547 DDB1Q16531 1140 aa21.5■■□□□ 1.03
YIPF3-205ENST00000460547 ANP32AP39687 249 aaKnown RBP21.49■■□□□ 1.03
YIPF3-205ENST00000460547 DCTN1Q14203 1278 aa21.49■■□□□ 1.03
YIPF3-205ENST00000460547 FAM196AQ6ZSG2 479 aa21.49■■□□□ 1.03
YIPF3-205ENST00000460547 RWDD1Q9H446 243 aaPredicted RBP21.49■■□□□ 1.03
YIPF3-205ENST00000460547 HTATSF1O43719 755 aaKnown RBP21.48■■□□□ 1.03
YIPF3-205ENST00000460547 C8orf58Q8NAV2 365 aa21.47■■□□□ 1.03
YIPF3-205ENST00000460547 MTHFSDQ2M296 383 aaKnown RBP21.47■■□□□ 1.03
YIPF3-205ENST00000460547 ITPRIPQ8IWB1 547 aa21.47■■□□□ 1.03
YIPF3-205ENST00000460547 TMEM57Q8N5G2 664 aa21.47■■□□□ 1.03
YIPF3-205ENST00000460547 RGPD5Q99666 1765 aa21.46■■□□□ 1.03
YIPF3-205ENST00000460547 EXOC5O00471 708 aa21.46■■□□□ 1.03
YIPF3-205ENST00000460547 HDAC1Q13547 482 aaPredicted RBP21.45■■□□□ 1.02
YIPF3-205ENST00000460547 FAM161AQ3B820 660 aa21.45■■□□□ 1.02
YIPF3-205ENST00000460547 ZBTB40Q9NUA8 1239 aa21.45■■□□□ 1.02
YIPF3-205ENST00000460547 ABCC4O15439 1325 aa21.45■■□□□ 1.02
YIPF3-205ENST00000460547 MCM10Q7L590 875 aa21.44■■□□□ 1.02
YIPF3-205ENST00000460547 CHMP4BQ9H444 224 aaKnown RBP21.44■■□□□ 1.02
YIPF3-205ENST00000460547 IL2RBP14784 551 aa21.43■■□□□ 1.02
YIPF3-205ENST00000460547 RTF1Q92541 710 aaKnown RBP21.43■■□□□ 1.02
YIPF3-205ENST00000460547 BAG6P46379 1132 aa21.42■■□□□ 1.02
YIPF3-205ENST00000460547 API5Q9BZZ5 524 aaKnown RBP21.42■■□□□ 1.02
YIPF3-205ENST00000460547 NCAPD2Q15021 1401 aa21.42■■□□□ 1.02
YIPF3-205ENST00000460547 EP400Q96L91 3159 aa21.41■■□□□ 1.02
YIPF3-205ENST00000460547 TRIM37O94972 964 aa21.41■■□□□ 1.02
YIPF3-205ENST00000460547 RGS3P49796 1198 aa21.41■■□□□ 1.02
YIPF3-205ENST00000460547 C8orf34Q49A92 452 aa21.41■■□□□ 1.02
YIPF3-205ENST00000460547 DEFB132Q7Z7B7 95 aa21.41■■□□□ 1.02
YIPF3-205ENST00000460547 IPO9Q96P70 1041 aaKnown RBP21.4■■□□□ 1.02
YIPF3-205ENST00000460547 MAP3K5Q99683 1374 aa21.4■■□□□ 1.02
YIPF3-205ENST00000460547 VIRMAQ69YN4 1812 aaKnown RBP21.39■■□□□ 1.02
YIPF3-205ENST00000460547 ELL2O00472 640 aaPredicted RBP21.39■■□□□ 1.01
YIPF3-205ENST00000460547 PARP4Q9UKK3 1724 aaKnown RBP21.39■■□□□ 1.01
YIPF3-205ENST00000460547 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
YIPF3-205ENST00000460547 GNAT3A8MTJ3 354 aa21.37■■□□□ 1.01
YIPF3-205ENST00000460547 MARCH10Q8NA82 808 aaPredicted RBP21.37■■□□□ 1.01
YIPF3-205ENST00000460547 BABAM1Q9NWV8 329 aa21.37■■□□□ 1.01
YIPF3-205ENST00000460547 PDZRN3Q9UPQ7 1066 aa21.37■■□□□ 1.01
YIPF3-205ENST00000460547 ANP32EQ9BTT0 268 aa21.37■■□□□ 1.01
YIPF3-205ENST00000460547 OVOS2A0A0G2JMS6 1433 aa21.37■■□□□ 1.01
YIPF3-205ENST00000460547 APBA3O96018 575 aa21.36■■□□□ 1.01
YIPF3-205ENST00000460547 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
YIPF3-205ENST00000460547 SMC5Q8IY18 1101 aa21.36■■□□□ 1.01
YIPF3-205ENST00000460547 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
YIPF3-205ENST00000460547 SOS1Q07889 1333 aaPredicted RBP21.36■■□□□ 1.01
YIPF3-205ENST00000460547 ZBTB7BO15156 539 aaPredicted RBP21.35■■□□□ 1.01
YIPF3-205ENST00000460547 PTPRCP08575 1304 aa21.34■■□□□ 1.01
YIPF3-205ENST00000460547 EN1Q05925 392 aaPredicted RBP21.34■■□□□ 1.01
YIPF3-205ENST00000460547 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
YIPF3-205ENST00000460547 NOP58Q9Y2X3 529 aaKnown RBP21.33■■□□□ 1
YIPF3-205ENST00000460547 KRT24Q2M2I5 525 aa21.32■■□□□ 1
YIPF3-205ENST00000460547 USHBP1Q8N6Y0 703 aa21.32■■□□□ 1
YIPF3-205ENST00000460547 CEMIPQ8WUJ3 1361 aa21.32■■□□□ 1
YIPF3-205ENST00000460547 INTS3Q68E01 1043 aaKnown RBP21.31■■□□□ 1
YIPF3-205ENST00000460547 RAPGEF4Q8WZA2 1011 aa21.31■■□□□ 1
YIPF3-205ENST00000460547 DDX54Q8TDD1 881 aaKnown RBP21.31■■□□□ 1
YIPF3-205ENST00000460547 TNS2Q63HR2 1409 aa21.3■■□□□ 1
YIPF3-205ENST00000460547 FAM208AQ9UK61 1670 aaKnown RBP21.3■■□□□ 1
YIPF3-205ENST00000460547 ERICH6Q7L0X2 663 aa21.3■■□□□ 1
YIPF3-205ENST00000460547 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
YIPF3-205ENST00000460547 IL17REQ8NFR9 667 aa21.29■■□□□ 1
YIPF3-205ENST00000460547 ZCRB1Q8TBF4 217 aaKnown RBP21.29■■□□□ 1
YIPF3-205ENST00000460547 WNK3Q9BYP7 1800 aa21.29■■□□□ 1
YIPF3-205ENST00000460547 EZH2Q15910 746 aaKnown RBP21.28■■□□□ 1
YIPF3-205ENST00000460547 BCL11BQ9C0K0 894 aaPredicted RBP21.28■■□□□ 1
YIPF3-205ENST00000460547 NPM2Q86SE8 214 aaKnown RBP21.28■■□□□ 1
YIPF3-205ENST00000460547 RGPD2P0DJD1 1756 aa21.27■■□□□ 1
YIPF3-205ENST00000460547 TAF7Q15545 349 aaPredicted RBP21.27■■□□□ 1
YIPF3-205ENST00000460547 BCL9O00512 1426 aa21.26■□□□□ 0.99
YIPF3-205ENST00000460547 DDRGK1Q96HY6 314 aa21.26■□□□□ 0.99
YIPF3-205ENST00000460547 CAMKK2Q96RR4 588 aa21.26■□□□□ 0.99
YIPF3-205ENST00000460547 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
YIPF3-205ENST00000460547 ACSBG1Q96GR2 724 aa21.25■□□□□ 0.99
YIPF3-205ENST00000460547 NUCB1Q02818 461 aa21.24■□□□□ 0.99
YIPF3-205ENST00000460547 AMOTQ4VCS5 1084 aa21.24■□□□□ 0.99
YIPF3-205ENST00000460547 GCC1Q96CN9 775 aa21.24■□□□□ 0.99
YIPF3-205ENST00000460547 ZBTB47Q9UFB7 747 aaPredicted RBP21.24■□□□□ 0.99
YIPF3-205ENST00000460547 PLEKHG2Q9H7P9 1386 aa21.24■□□□□ 0.99
YIPF3-205ENST00000460547 KDM3BQ7LBC6 1761 aa21.23■□□□□ 0.99
YIPF3-205ENST00000460547 PLEKHO1Q53GL0 409 aaPredicted RBP21.23■□□□□ 0.99
YIPF3-205ENST00000460547 PLSCR1O15162 318 aa21.22■□□□□ 0.99
YIPF3-205ENST00000460547 SLC4A2P04920 1241 aa21.22■□□□□ 0.99
YIPF3-205ENST00000460547 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
YIPF3-205ENST00000460547 PTF1AQ7RTS3 328 aa21.22■□□□□ 0.99
YIPF3-205ENST00000460547 MEGF6O75095 1541 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms