RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 MKRN1Q9UHC7 482 aaKnown RBP6.39□□□□□ -1.39
VPS8-215ENST00000460158 LZTS3O60299 673 aaPredicted RBP6.38□□□□□ -1.39
VPS8-215ENST00000460158 SCTRP47872 440 aa6.38□□□□□ -1.39
VPS8-215ENST00000460158 SRSF11Q05519 484 aaKnown RBP6.38□□□□□ -1.39
VPS8-215ENST00000460158 KANK3Q6NY19 840 aa6.38□□□□□ -1.39
VPS8-215ENST00000460158 LYSMD3Q7Z3D4 306 aa6.38□□□□□ -1.39
VPS8-215ENST00000460158 WHAMMQ8TF30 809 aa6.38□□□□□ -1.39
VPS8-215ENST00000460158 GMCL1Q96IK5 515 aa6.38□□□□□ -1.39
VPS8-215ENST00000460158 VRTNQ9H8Y1 702 aa6.38□□□□□ -1.39
VPS8-215ENST00000460158 PPP1R15AO75807 674 aaPredicted RBP6.37□□□□□ -1.39
VPS8-215ENST00000460158 ADAMTS2O95450 1211 aa6.37□□□□□ -1.39
VPS8-215ENST00000460158 RNF144AP50876 292 aaPredicted RBP6.37□□□□□ -1.39
VPS8-215ENST00000460158 MARSP56192 900 aaKnown RBP6.37□□□□□ -1.39
VPS8-215ENST00000460158 SCARF2Q96GP6 870 aaPredicted RBP6.37□□□□□ -1.39
VPS8-215ENST00000460158 CYLDQ9NQC7 956 aa6.37□□□□□ -1.39
VPS8-215ENST00000460158 DNMT3AQ9Y6K1 912 aaPredicted RBP6.37□□□□□ -1.39
VPS8-215ENST00000460158 IGHA1P01876 353 aa6.36□□□□□ -1.39
VPS8-215ENST00000460158 ERVK-9P63128 1117 aa6.36□□□□□ -1.39
VPS8-215ENST00000460158 USP4Q13107 963 aa6.36□□□□□ -1.39
VPS8-215ENST00000460158 NOD1Q9Y239 953 aa6.36□□□□□ -1.39
VPS8-215ENST00000460158 ATP5J2-PTCD1G3V325 749 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 RASA1P20936 1047 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 GPC1P35052 558 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 IRS1P35568 1242 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 CLDN10P78369 228 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 FOXK2Q01167 660 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 MAP3K10Q02779 954 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 CRTC2Q53ET0 693 aaPredicted RBP6.35□□□□□ -1.39
VPS8-215ENST00000460158 CC2D2BQ6DHV5 1058 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 SIRT1Q96EB6 747 aa6.35□□□□□ -1.39
VPS8-215ENST00000460158 ACIN1Q9UKV3 1341 aaKnown RBP6.34□□□□□ -1.39
VPS8-215ENST00000460158 MYCP01106 439 aaPredicted RBP6.34□□□□□ -1.39
VPS8-215ENST00000460158 GTF2IP78347 998 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 GAS6Q14393 721 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 LYPD4Q6UWN0 246 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 TRIM50Q86XT4 487 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 OGFOD1Q8N543 542 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 ARXQ96QS3 562 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 OSBPL3Q9H4L5 887 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 ENAMQ9NRM1 1142 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 CUEDC1Q9NWM3 386 aaPredicted RBP6.34□□□□□ -1.39
VPS8-215ENST00000460158 PCDHGA11Q9Y5H2 935 aa6.34□□□□□ -1.39
VPS8-215ENST00000460158 USP17L15C9J2P7 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L10C9JJH3 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L13C9JLJ4 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L12C9JPN9 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L11C9JVI0 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L21D6R901 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L18D6R9N7 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L22D6RA61 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L17D6RBQ6 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L19D6RCP7 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L20D6RJB6 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 ZBTB7BO15156 539 aaPredicted RBP6.33□□□□□ -1.4
VPS8-215ENST00000460158 ATG7O95352 703 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 CELA2BP08218 269 aaPredicted RBP6.33□□□□□ -1.4
VPS8-215ENST00000460158 USP17L24Q0WX57 530 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 PTK7Q13308 1070 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 FOXR1Q6PIV2 292 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 LARP1Q6PKG0 1096 aaKnown RBP6.33□□□□□ -1.4
VPS8-215ENST00000460158 PRICKLE2Q7Z3G6 844 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 TRIM22Q8IYM9 498 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 ZNF594Q96JF6 807 aaPredicted RBP6.33□□□□□ -1.4
VPS8-215ENST00000460158 ESF1Q9H501 851 aaKnown RBP6.33□□□□□ -1.4
VPS8-215ENST00000460158 DNAAF2Q9NVR5 837 aaKnown RBP6.33□□□□□ -1.4
VPS8-215ENST00000460158 KIAA1024Q9UPX6 916 aa6.33□□□□□ -1.4
VPS8-215ENST00000460158 FAM196BA6NMK8 535 aa6.32□□□□□ -1.4
VPS8-215ENST00000460158 STAU1O95793 577 aaKnown RBP6.32□□□□□ -1.4
VPS8-215ENST00000460158 ATP1A2P50993 1020 aa6.32□□□□□ -1.4
VPS8-215ENST00000460158 HOMEZQ8IX15 550 aa6.32□□□□□ -1.4
VPS8-215ENST00000460158 RETREG2Q8NC44 543 aa6.32□□□□□ -1.4
VPS8-215ENST00000460158 ZNF837Q96EG3 531 aaPredicted RBP6.32□□□□□ -1.4
VPS8-215ENST00000460158 MBIPQ9NS73 344 aa6.32□□□□□ -1.4
VPS8-215ENST00000460158 ZMIZ1Q9ULJ6 1067 aa6.32□□□□□ -1.4
VPS8-215ENST00000460158 H7C1W4 665 aa6.31□□□□□ -1.4
VPS8-215ENST00000460158 PSME1Q06323 249 aa6.31□□□□□ -1.4
VPS8-215ENST00000460158 GPAT2Q6NUI2 795 aa6.31□□□□□ -1.4
VPS8-215ENST00000460158 LARGE2Q8N3Y3 721 aa6.31□□□□□ -1.4
VPS8-215ENST00000460158 NOVA2Q9UNW9 492 aaKnown RBP6.31□□□□□ -1.4
VPS8-215ENST00000460158 DYRK1BQ9Y463 629 aa6.31□□□□□ -1.4
VPS8-215ENST00000460158 DKK1O94907 266 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 RHOQP17081 205 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 DPYDQ12882 1025 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 ELOAQ14241 798 aaKnown RBP6.3□□□□□ -1.4
VPS8-215ENST00000460158 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 CCDC102BQ68D86 513 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 ANKMY2Q8IV38 441 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 SIX5Q8N196 739 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 TPCN2Q8NHX9 752 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 LRRC4BQ9NT99 713 aa6.3□□□□□ -1.4
VPS8-215ENST00000460158 A0A1W2PRU2 124 aa6.29□□□□□ -1.4
VPS8-215ENST00000460158 CARNS1A5YM72 827 aa6.29□□□□□ -1.4
VPS8-215ENST00000460158 PHF20L1A8MW92 1017 aa6.29□□□□□ -1.4
VPS8-215ENST00000460158 MEN1O00255 615 aa6.29□□□□□ -1.4
VPS8-215ENST00000460158 DBN1Q16643 649 aa6.29□□□□□ -1.4
VPS8-215ENST00000460158 CYP2U1Q7Z449 544 aa6.29□□□□□ -1.4
VPS8-215ENST00000460158 STK32AQ8WU08 396 aa6.29□□□□□ -1.4
VPS8-215ENST00000460158 RAB6BQ9NRW1 208 aa6.29□□□□□ -1.4
VPS8-215ENST00000460158 SFI1A8K8P3 1242 aa6.28□□□□□ -1.4
VPS8-215ENST00000460158 TMEM229AB2RXF0 380 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms