RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 NEUROD2Q15784 382 aa14.34□□□□□ -0.11
CCDC12-204ENST00000460035 EZH2Q15910 746 aaKnown RBP14.34□□□□□ -0.11
CCDC12-204ENST00000460035 NFE2L2Q16236 605 aa14.34□□□□□ -0.11
CCDC12-204ENST00000460035 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
CCDC12-204ENST00000460035 C5P01031 1676 aa14.33□□□□□ -0.11
CCDC12-204ENST00000460035 KDM3BQ7LBC6 1761 aa14.33□□□□□ -0.12
CCDC12-204ENST00000460035 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
CCDC12-204ENST00000460035 NFATC2IPQ8NCF5 419 aa14.33□□□□□ -0.12
CCDC12-204ENST00000460035 IL17REQ8NFR9 667 aa14.33□□□□□ -0.12
CCDC12-204ENST00000460035 CAMKK2Q96RR4 588 aa14.33□□□□□ -0.12
CCDC12-204ENST00000460035 COL5A3P25940 1745 aaPredicted RBP14.32□□□□□ -0.12
CCDC12-204ENST00000460035 RIPK4P57078 832 aa14.32□□□□□ -0.12
CCDC12-204ENST00000460035 RRP7AQ9Y3A4 280 aaKnown RBP14.32□□□□□ -0.12
CCDC12-204ENST00000460035 QSER1Q2KHR3 1735 aa14.32□□□□□ -0.12
CCDC12-204ENST00000460035 TUBGCP6Q96RT7 1819 aa14.31□□□□□ -0.12
CCDC12-204ENST00000460035 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
CCDC12-204ENST00000460035 TEFQ10587 303 aa14.31□□□□□ -0.12
CCDC12-204ENST00000460035 DCTN1Q14203 1278 aa14.31□□□□□ -0.12
CCDC12-204ENST00000460035 MCM10Q7L590 875 aa14.31□□□□□ -0.12
CCDC12-204ENST00000460035 SLC52A2Q9HAB3 445 aa14.31□□□□□ -0.12
CCDC12-204ENST00000460035 APAF1O14727 1248 aa14.3□□□□□ -0.12
CCDC12-204ENST00000460035 TXNRD1Q16881 649 aa14.3□□□□□ -0.12
CCDC12-204ENST00000460035 SMARCC1Q92922 1105 aaPredicted RBP14.3□□□□□ -0.12
CCDC12-204ENST00000460035 ASAP1Q9ULH1 1129 aa14.3□□□□□ -0.12
CCDC12-204ENST00000460035 TJP1Q07157 1748 aa14.29□□□□□ -0.12
CCDC12-204ENST00000460035 MYH14Q7Z406 1995 aaKnown RBP14.29□□□□□ -0.12
CCDC12-204ENST00000460035 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
CCDC12-204ENST00000460035 PALLDQ8WX93 1383 aa14.29□□□□□ -0.12
CCDC12-204ENST00000460035 UBR3Q6ZT12 1888 aa14.28□□□□□ -0.12
CCDC12-204ENST00000460035 PROM2Q8N271 834 aa14.28□□□□□ -0.12
CCDC12-204ENST00000460035 ATG3Q9NT62 314 aa14.28□□□□□ -0.12
CCDC12-204ENST00000460035 KCPQ6ZWJ8 1503 aa14.27□□□□□ -0.12
CCDC12-204ENST00000460035 KCNQ4P56696 695 aa14.27□□□□□ -0.13
CCDC12-204ENST00000460035 LMOD3Q0VAK6 560 aa14.27□□□□□ -0.13
CCDC12-204ENST00000460035 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
CCDC12-204ENST00000460035 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.13
CCDC12-204ENST00000460035 SLC39A6Q13433 755 aa14.26□□□□□ -0.13
CCDC12-204ENST00000460035 SLC27A3Q5K4L6 730 aa14.26□□□□□ -0.13
CCDC12-204ENST00000460035 NBPF14Q5TI25 921 aa14.26□□□□□ -0.13
CCDC12-204ENST00000460035 CCNL1Q9UK58 526 aaPredicted RBP14.26□□□□□ -0.13
CCDC12-204ENST00000460035 LAMB4A4D0S4 1761 aa14.26□□□□□ -0.13
CCDC12-204ENST00000460035 C4BP0C0L5 1744 aa14.26□□□□□ -0.13
CCDC12-204ENST00000460035 BTBD11A6QL63 1104 aa14.25□□□□□ -0.13
CCDC12-204ENST00000460035 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
CCDC12-204ENST00000460035 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
CCDC12-204ENST00000460035 TTC5Q8N0Z6 440 aa14.25□□□□□ -0.13
CCDC12-204ENST00000460035 SALL2Q9Y467 1007 aaPredicted RBP14.25□□□□□ -0.13
CCDC12-204ENST00000460035 LOC102724428A0A0B4J2F2 783 aa14.24□□□□□ -0.13
CCDC12-204ENST00000460035 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
CCDC12-204ENST00000460035 SIK1P57059 783 aa14.24□□□□□ -0.13
CCDC12-204ENST00000460035 TAF7Q15545 349 aaPredicted RBP14.24□□□□□ -0.13
CCDC12-204ENST00000460035 LRRC4BQ9NT99 713 aa14.24□□□□□ -0.13
CCDC12-204ENST00000460035 MIS18AQ9NYP9 233 aa14.24□□□□□ -0.13
CCDC12-204ENST00000460035 TRIM35Q9UPQ4 493 aa14.24□□□□□ -0.13
CCDC12-204ENST00000460035 HMGB2P26583 209 aaKnown RBP14.23□□□□□ -0.13
CCDC12-204ENST00000460035 LAS1LQ9Y4W2 734 aaKnown RBP14.22□□□□□ -0.13
CCDC12-204ENST00000460035 CASZ1Q86V15 1759 aa14.22□□□□□ -0.13
CCDC12-204ENST00000460035 KCNQ3O43525 872 aa14.21□□□□□ -0.13
CCDC12-204ENST00000460035 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
CCDC12-204ENST00000460035 ZNF790Q6PG37 636 aa14.21□□□□□ -0.13
CCDC12-204ENST00000460035 STK32BQ9NY57 414 aa14.21□□□□□ -0.13
CCDC12-204ENST00000460035 CACNA1FO60840 1977 aa14.21□□□□□ -0.13
CCDC12-204ENST00000460035 NGEFQ8N5V2 710 aa14.2□□□□□ -0.14
CCDC12-204ENST00000460035 SLC4A9Q96Q91 983 aa14.2□□□□□ -0.14
CCDC12-204ENST00000460035 BABAM1Q9NWV8 329 aa14.2□□□□□ -0.14
CCDC12-204ENST00000460035 C4AP0C0L4 1744 aa14.19□□□□□ -0.14
CCDC12-204ENST00000460035 PSDA5PKW4 1024 aaPredicted RBP14.19□□□□□ -0.14
CCDC12-204ENST00000460035 ITPK1Q13572 414 aa14.19□□□□□ -0.14
CCDC12-204ENST00000460035 R3HDM1Q15032 1099 aaKnown RBP14.19□□□□□ -0.14
CCDC12-204ENST00000460035 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
CCDC12-204ENST00000460035 TSPYL4Q9UJ04 414 aa14.19□□□□□ -0.14
CCDC12-204ENST00000460035 COL24A1Q17RW2 1714 aa14.18□□□□□ -0.14
CCDC12-204ENST00000460035 CALD1Q05682 793 aaKnown RBP14.18□□□□□ -0.14
CCDC12-204ENST00000460035 SLC15A2Q16348 729 aa14.18□□□□□ -0.14
CCDC12-204ENST00000460035 ZNF496Q96IT1 587 aaPredicted RBP14.18□□□□□ -0.14
CCDC12-204ENST00000460035 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
CCDC12-204ENST00000460035 ANO8Q9HCE9 1232 aaPredicted RBP14.18□□□□□ -0.14
CCDC12-204ENST00000460035 HEG1Q9ULI3 1381 aa14.18□□□□□ -0.14
CCDC12-204ENST00000460035 WWC1Q8IX03 1113 aa14.17□□□□□ -0.14
CCDC12-204ENST00000460035 DNAJC10Q8IXB1 793 aa14.17□□□□□ -0.14
CCDC12-204ENST00000460035 LINC00116Q8NCU8 138 aa14.17□□□□□ -0.14
CCDC12-204ENST00000460035 AKT1S1Q96B36 256 aa14.17□□□□□ -0.14
CCDC12-204ENST00000460035 TFCP2L1Q9NZI6 479 aa14.17□□□□□ -0.14
CCDC12-204ENST00000460035 CHL1O00533 1208 aa14.16□□□□□ -0.14
CCDC12-204ENST00000460035 ZNF827Q17R98 1081 aa14.16□□□□□ -0.14
CCDC12-204ENST00000460035 AK7Q96M32 723 aa14.16□□□□□ -0.14
CCDC12-204ENST00000460035 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.14
CCDC12-204ENST00000460035 ZNF853P0CG23 659 aa14.15□□□□□ -0.14
CCDC12-204ENST00000460035 GNAI1P63096 354 aa14.15□□□□□ -0.14
CCDC12-204ENST00000460035 CFAP44Q96MT7 982 aa14.15□□□□□ -0.14
CCDC12-204ENST00000460035 MSH5O43196 834 aa14.14□□□□□ -0.15
CCDC12-204ENST00000460035 STARD3NLO95772 234 aa14.14□□□□□ -0.15
CCDC12-204ENST00000460035 SNRPA1P09661 255 aaKnown RBP14.14□□□□□ -0.15
CCDC12-204ENST00000460035 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
CCDC12-204ENST00000460035 RC3H1Q5TC82 1133 aaKnown RBP14.14□□□□□ -0.15
CCDC12-204ENST00000460035 TEX13AQ9BXU3 409 aaPredicted RBP14.14□□□□□ -0.15
CCDC12-204ENST00000460035 IFT57Q9NWB7 429 aa14.14□□□□□ -0.15
CCDC12-204ENST00000460035 IL16Q14005 1332 aa14.14□□□□□ -0.15
CCDC12-204ENST00000460035 GNPATO15228 680 aa14.13□□□□□ -0.15
CCDC12-204ENST00000460035 CRKLP46109 303 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms