RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 UBR3Q6ZT12 1888 aa28.27■■■□□ 2.12
SRM-202ENST00000459997 DIAPH1O60610 1272 aaKnown RBP28.27■■■□□ 2.12
SRM-202ENST00000459997 ATP6V1AP38606 617 aa28.27■■■□□ 2.12
SRM-202ENST00000459997 KLHL34Q8N239 644 aa28.27■■■□□ 2.12
SRM-202ENST00000459997 HMOX1P09601 288 aa28.26■■■□□ 2.11
SRM-202ENST00000459997 CABP4P57796 275 aa28.26■■■□□ 2.11
SRM-202ENST00000459997 ITPK1Q13572 414 aa28.26■■■□□ 2.11
SRM-202ENST00000459997 MSL1Q68DK7 614 aa28.25■■■□□ 2.11
SRM-202ENST00000459997 PHF14O94880 888 aa28.24■■■□□ 2.11
SRM-202ENST00000459997 AMIGO3Q86WK7 504 aa28.24■■■□□ 2.11
SRM-202ENST00000459997 COL3A1P02461 1466 aaPredicted RBP28.22■■■□□ 2.11
SRM-202ENST00000459997 RBM42Q9BTD8 480 aaKnown RBP28.22■■■□□ 2.11
SRM-202ENST00000459997 ZNF831Q5JPB2 1677 aa28.22■■■□□ 2.11
SRM-202ENST00000459997 SCN11AQ9UI33 1791 aa28.22■■■□□ 2.11
SRM-202ENST00000459997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.21■■■□□ 2.11
SRM-202ENST00000459997 YY1P25490 414 aa28.21■■■□□ 2.11
SRM-202ENST00000459997 SMIM5Q71RC9 77 aa28.21■■■□□ 2.11
SRM-202ENST00000459997 GNPATO15228 680 aa28.2■■■□□ 2.1
SRM-202ENST00000459997 AKAP4Q5JQC9 854 aa28.2■■■□□ 2.1
SRM-202ENST00000459997 SSFA2P28290 1259 aa28.19■■■□□ 2.1
SRM-202ENST00000459997 NFATC2IPQ8NCF5 419 aa28.19■■■□□ 2.1
SRM-202ENST00000459997 SLC4A9Q96Q91 983 aa28.18■■■□□ 2.1
SRM-202ENST00000459997 COL5A3P25940 1745 aaPredicted RBP28.17■■■□□ 2.1
SRM-202ENST00000459997 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
SRM-202ENST00000459997 PTCD1O75127 700 aaKnown RBP28.14■■■□□ 2.1
SRM-202ENST00000459997 MTHFSDQ2M296 383 aaKnown RBP28.14■■■□□ 2.1
SRM-202ENST00000459997 NLGN2Q8NFZ4 835 aa28.14■■■□□ 2.1
SRM-202ENST00000459997 VIRMAQ69YN4 1812 aaKnown RBP28.13■■■□□ 2.09
SRM-202ENST00000459997 LGR6Q9HBX8 967 aa28.13■■■□□ 2.09
SRM-202ENST00000459997 MRC1P22897 1456 aa28.11■■■□□ 2.09
SRM-202ENST00000459997 GPR162Q16538 588 aa28.11■■■□□ 2.09
SRM-202ENST00000459997 CFAP53Q96M91 514 aa28.11■■■□□ 2.09
SRM-202ENST00000459997 SLC52A2Q9HAB3 445 aa28.11■■■□□ 2.09
SRM-202ENST00000459997 RTCBQ9Y3I0 505 aaKnown RBP28.11■■■□□ 2.09
SRM-202ENST00000459997 RNMTO43148 476 aaKnown RBP28.1■■■□□ 2.09
SRM-202ENST00000459997 CNTNAP4Q9C0A0 1308 aa28.1■■■□□ 2.09
SRM-202ENST00000459997 ADAMTS7Q9UKP4 1686 aa28.1■■■□□ 2.09
SRM-202ENST00000459997 RC3H1Q5TC82 1133 aaKnown RBP28.09■■■□□ 2.09
SRM-202ENST00000459997 TJP1Q07157 1748 aa28.09■■■□□ 2.09
SRM-202ENST00000459997 PELP1Q8IZL8 1130 aaKnown RBP28.08■■■□□ 2.09
SRM-202ENST00000459997 CICQ96RK0 1608 aaPredicted RBP28.07■■■□□ 2.08
SRM-202ENST00000459997 PPP2R1AP30153 589 aa28.07■■■□□ 2.08
SRM-202ENST00000459997 TRAPPC3LQ5T215 181 aa28.07■■■□□ 2.08
SRM-202ENST00000459997 UTRNP46939 3433 aa28.06■■■□□ 2.08
SRM-202ENST00000459997 CD2APQ9Y5K6 639 aa28.05■■■□□ 2.08
SRM-202ENST00000459997 RPS6KA4O75676 772 aa28.04■■■□□ 2.08
SRM-202ENST00000459997 ADRA2BP18089 450 aa28.04■■■□□ 2.08
SRM-202ENST00000459997 MYH14Q7Z406 1995 aaKnown RBP28.04■■■□□ 2.08
SRM-202ENST00000459997 CHD4Q14839 1912 aa28.03■■■□□ 2.08
SRM-202ENST00000459997 CRKLP46109 303 aaKnown RBP28.03■■■□□ 2.08
SRM-202ENST00000459997 C4AP0C0L4 1744 aa28.02■■■□□ 2.08
SRM-202ENST00000459997 SLC39A6Q13433 755 aa28.02■■■□□ 2.08
SRM-202ENST00000459997 GAS2L2Q8NHY3 880 aa28.02■■■□□ 2.08
SRM-202ENST00000459997 ARHGEF1Q92888 912 aaKnown RBP28.02■■■□□ 2.08
SRM-202ENST00000459997 NUDCQ9Y266 331 aa28.01■■■□□ 2.07
SRM-202ENST00000459997 RFC4P35249 363 aa28■■■□□ 2.07
SRM-202ENST00000459997 KCPQ6ZWJ8 1503 aa28■■■□□ 2.07
SRM-202ENST00000459997 GNAT3A8MTJ3 354 aa27.99■■■□□ 2.07
SRM-202ENST00000459997 MMP10P09238 476 aa27.99■■■□□ 2.07
SRM-202ENST00000459997 PRKAR2BP31323 418 aa27.99■■■□□ 2.07
SRM-202ENST00000459997 RSPH6AQ9H0K4 717 aa27.99■■■□□ 2.07
SRM-202ENST00000459997 GOLGB1Q14789 3259 aaKnown RBP27.98■■■□□ 2.07
SRM-202ENST00000459997 DNAJC10Q8IXB1 793 aa27.98■■■□□ 2.07
SRM-202ENST00000459997 YBX3P16989 372 aaKnown RBP eCLIP27.97■■■□□ 2.072e-12■■□□□ 14.1
SRM-202ENST00000459997 NLGN1Q8N2Q7 840 aa27.97■■■□□ 2.07
SRM-202ENST00000459997 UBR2Q8IWV8 1755 aa27.96■■■□□ 2.07
SRM-202ENST00000459997 U2AF1L5P0DN76 240 aaPredicted RBP27.96■■■□□ 2.07
SRM-202ENST00000459997 U2AF1Q01081 240 aaKnown RBP eCLIP27.96■■■□□ 2.07
SRM-202ENST00000459997 PHACTR3Q96KR7 559 aa27.96■■■□□ 2.07
SRM-202ENST00000459997 GYS1P13807 737 aa27.95■■■□□ 2.06
SRM-202ENST00000459997 TEFQ10587 303 aa27.95■■■□□ 2.06
SRM-202ENST00000459997 INTS5Q6P9B9 1019 aaKnown RBP27.95■■■□□ 2.06
SRM-202ENST00000459997 IL17REQ8NFR9 667 aa27.95■■■□□ 2.06
SRM-202ENST00000459997 CCDC87Q9NVE4 849 aa27.94■■■□□ 2.06
SRM-202ENST00000459997 SIPA1L3O60292 1781 aaPredicted RBP27.94■■■□□ 2.06
SRM-202ENST00000459997 TTC5Q8N0Z6 440 aa27.93■■■□□ 2.06
SRM-202ENST00000459997 GRIN3BO60391 1043 aa27.92■■■□□ 2.06
SRM-202ENST00000459997 CYP19A1P11511 503 aaPredicted RBP27.91■■■□□ 2.06
SRM-202ENST00000459997 VSIG10Q8N0Z9 540 aa27.91■■■□□ 2.06
SRM-202ENST00000459997 SRP68Q9UHB9 627 aaKnown RBP27.91■■■□□ 2.06
SRM-202ENST00000459997 FCHSD2O94868 740 aa27.9■■■□□ 2.06
SRM-202ENST00000459997 ZNF784Q8NCA9 323 aaPredicted RBP27.9■■■□□ 2.06
SRM-202ENST00000459997 USP42Q9H9J4 1324 aaKnown RBP27.9■■■□□ 2.06
SRM-202ENST00000459997 CEMIPQ8WUJ3 1361 aa27.89■■■□□ 2.06
SRM-202ENST00000459997 KIF13BQ9NQT8 1826 aa27.89■■■□□ 2.06
SRM-202ENST00000459997 PARP3Q9Y6F1 533 aa27.88■■■□□ 2.05
SRM-202ENST00000459997 SOS1Q07889 1333 aaPredicted RBP27.88■■■□□ 2.05
SRM-202ENST00000459997 ZNF790Q6PG37 636 aa27.87■■■□□ 2.05
SRM-202ENST00000459997 WWC3Q9ULE0 1092 aa27.87■■■□□ 2.05
SRM-202ENST00000459997 C10orf71Q711Q0 1435 aa27.86■■■□□ 2.05
SRM-202ENST00000459997 ZBTB1Q9Y2K1 713 aa27.86■■■□□ 2.05
SRM-202ENST00000459997 FKBP8Q14318 412 aa27.85■■■□□ 2.05
SRM-202ENST00000459997 ZNF496Q96IT1 587 aaPredicted RBP27.85■■■□□ 2.05
SRM-202ENST00000459997 KIAA1551Q9HCM1 1747 aa27.84■■■□□ 2.05
SRM-202ENST00000459997 PXDNLA1KZ92 1463 aa27.84■■■□□ 2.05
SRM-202ENST00000459997 ZPR1O75312 459 aa27.84■■■□□ 2.05
SRM-202ENST00000459997 COL15A1P39059 1388 aa27.84■■■□□ 2.05
SRM-202ENST00000459997 HEG1Q9ULI3 1381 aa27.84■■■□□ 2.05
SRM-202ENST00000459997 RTF1Q92541 710 aaKnown RBP27.83■■■□□ 2.05
SRM-202ENST00000459997 N4BP2Q86UW6 1770 aaPredicted RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms