RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
COL18A1-206ENST00000459895 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
COL18A1-206ENST00000459895 PIGBQ92521 554 aa17■□□□□ 0.31
COL18A1-206ENST00000459895 LGR6Q9HBX8 967 aa17■□□□□ 0.31
COL18A1-206ENST00000459895 CASZ1Q86V15 1759 aa17■□□□□ 0.31
COL18A1-206ENST00000459895 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
COL18A1-206ENST00000459895 NEFMP07197 916 aa16.99■□□□□ 0.31
COL18A1-206ENST00000459895 RUNDC1Q96C34 613 aa16.99■□□□□ 0.31
COL18A1-206ENST00000459895 PNNQ9H307 717 aaKnown RBP16.98■□□□□ 0.31
COL18A1-206ENST00000459895 SLC52A2Q9HAB3 445 aa16.98■□□□□ 0.31
COL18A1-206ENST00000459895 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
COL18A1-206ENST00000459895 PLSCR1O15162 318 aa16.97■□□□□ 0.31
COL18A1-206ENST00000459895 CABP4P57796 275 aa16.97■□□□□ 0.31
COL18A1-206ENST00000459895 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
COL18A1-206ENST00000459895 MCM10Q7L590 875 aa16.97■□□□□ 0.31
COL18A1-206ENST00000459895 IL17REQ8NFR9 667 aa16.97■□□□□ 0.31
COL18A1-206ENST00000459895 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
COL18A1-206ENST00000459895 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
COL18A1-206ENST00000459895 C4AP0C0L4 1744 aa16.96■□□□□ 0.3
COL18A1-206ENST00000459895 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
COL18A1-206ENST00000459895 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
COL18A1-206ENST00000459895 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
COL18A1-206ENST00000459895 MIER1Q8N108 512 aa16.95■□□□□ 0.3
COL18A1-206ENST00000459895 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
COL18A1-206ENST00000459895 PROM2Q8N271 834 aa16.94■□□□□ 0.3
COL18A1-206ENST00000459895 NFATC2IPQ8NCF5 419 aa16.94■□□□□ 0.3
COL18A1-206ENST00000459895 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
COL18A1-206ENST00000459895 ANO8Q9HCE9 1232 aaPredicted RBP16.94■□□□□ 0.3
COL18A1-206ENST00000459895 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
COL18A1-206ENST00000459895 KCNQ4P56696 695 aa16.93■□□□□ 0.3
COL18A1-206ENST00000459895 TEFQ10587 303 aa16.93■□□□□ 0.3
COL18A1-206ENST00000459895 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
COL18A1-206ENST00000459895 LRRC4BQ9NT99 713 aa16.93■□□□□ 0.3
COL18A1-206ENST00000459895 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
COL18A1-206ENST00000459895 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
COL18A1-206ENST00000459895 RIPK4P57078 832 aa16.92■□□□□ 0.3
COL18A1-206ENST00000459895 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-206ENST00000459895 APAF1O14727 1248 aa16.91■□□□□ 0.3
COL18A1-206ENST00000459895 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
COL18A1-206ENST00000459895 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-206ENST00000459895 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
COL18A1-206ENST00000459895 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
COL18A1-206ENST00000459895 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
COL18A1-206ENST00000459895 TRIM35Q9UPQ4 493 aa16.9■□□□□ 0.3
COL18A1-206ENST00000459895 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.3
COL18A1-206ENST00000459895 LOC102724428A0A0B4J2F2 783 aa16.89■□□□□ 0.29
COL18A1-206ENST00000459895 SIK1P57059 783 aa16.89■□□□□ 0.29
COL18A1-206ENST00000459895 ZNF827Q17R98 1081 aa16.89■□□□□ 0.29
COL18A1-206ENST00000459895 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
COL18A1-206ENST00000459895 ITPK1Q13572 414 aa16.88■□□□□ 0.29
COL18A1-206ENST00000459895 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
COL18A1-206ENST00000459895 PTCD1O75127 700 aaKnown RBP16.87■□□□□ 0.29
COL18A1-206ENST00000459895 LINC00116Q8NCU8 138 aa16.87■□□□□ 0.29
COL18A1-206ENST00000459895 LRP5O75197 1615 aa16.86■□□□□ 0.29
COL18A1-206ENST00000459895 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
COL18A1-206ENST00000459895 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
COL18A1-206ENST00000459895 HEG1Q9ULI3 1381 aa16.86■□□□□ 0.29
COL18A1-206ENST00000459895 COL24A1Q17RW2 1714 aa16.85■□□□□ 0.29
COL18A1-206ENST00000459895 BCORQ6W2J9 1755 aa16.85■□□□□ 0.29
COL18A1-206ENST00000459895 KCNQ3O43525 872 aa16.85■□□□□ 0.29
COL18A1-206ENST00000459895 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
COL18A1-206ENST00000459895 TTC5Q8N0Z6 440 aa16.85■□□□□ 0.29
COL18A1-206ENST00000459895 PSDA5PKW4 1024 aaPredicted RBP16.84■□□□□ 0.29
COL18A1-206ENST00000459895 ATP6V1AP38606 617 aa16.84■□□□□ 0.29
COL18A1-206ENST00000459895 AKT1S1Q96B36 256 aa16.84■□□□□ 0.29
COL18A1-206ENST00000459895 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
COL18A1-206ENST00000459895 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
COL18A1-206ENST00000459895 MIS18AQ9NYP9 233 aa16.83■□□□□ 0.28
COL18A1-206ENST00000459895 STK32BQ9NY57 414 aa16.82■□□□□ 0.28
COL18A1-206ENST00000459895 CNTNAP4Q9C0A0 1308 aa16.81■□□□□ 0.28
COL18A1-206ENST00000459895 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-206ENST00000459895 SLC15A2Q16348 729 aa16.81■□□□□ 0.28
COL18A1-206ENST00000459895 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
COL18A1-206ENST00000459895 DNAJC10Q8IXB1 793 aa16.81■□□□□ 0.28
COL18A1-206ENST00000459895 PNPLA7Q6ZV29 1317 aa16.8■□□□□ 0.28
COL18A1-206ENST00000459895 CCDC27Q2M243 656 aa16.8■□□□□ 0.28
COL18A1-206ENST00000459895 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
COL18A1-206ENST00000459895 FMNL2Q96PY5 1086 aa16.8■□□□□ 0.28
COL18A1-206ENST00000459895 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
COL18A1-206ENST00000459895 WWC1Q8IX03 1113 aa16.79■□□□□ 0.28
COL18A1-206ENST00000459895 AK7Q96M32 723 aa16.79■□□□□ 0.28
COL18A1-206ENST00000459895 SALL2Q9Y467 1007 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-206ENST00000459895 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
COL18A1-206ENST00000459895 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
COL18A1-206ENST00000459895 PDGFDQ9GZP0 370 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-206ENST00000459895 GNPATO15228 680 aa16.77■□□□□ 0.28
COL18A1-206ENST00000459895 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
COL18A1-206ENST00000459895 LAS1LQ9Y4W2 734 aaKnown RBP16.77■□□□□ 0.28
COL18A1-206ENST00000459895 ZNF521Q96K83 1311 aa16.76■□□□□ 0.27
COL18A1-206ENST00000459895 CHL1O00533 1208 aa16.76■□□□□ 0.27
COL18A1-206ENST00000459895 EIF4A1P60842 406 aaKnown RBP16.76■□□□□ 0.27
COL18A1-206ENST00000459895 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
COL18A1-206ENST00000459895 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
COL18A1-206ENST00000459895 MBIPQ9NS73 344 aa16.76■□□□□ 0.27
COL18A1-206ENST00000459895 IFT57Q9NWB7 429 aa16.76■□□□□ 0.27
COL18A1-206ENST00000459895 TFCP2L1Q9NZI6 479 aa16.76■□□□□ 0.27
COL18A1-206ENST00000459895 PHF14O94880 888 aa16.75■□□□□ 0.27
COL18A1-206ENST00000459895 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
COL18A1-206ENST00000459895 CYP19A1P11511 503 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-206ENST00000459895 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms