RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 SPATA31A3Q5VYP0 1347 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 MCM5P33992 734 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 INCENPQ9NQS7 918 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
UFD1-205ENST00000459854 NPC1L1Q9UHC9 1359 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 CDC42BPGQ6DT37 1551 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 CHRNA2Q15822 529 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
UFD1-205ENST00000459854 SMC3Q9UQE7 1217 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 JCADQ9P266 1359 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 MST1RQ04912 1400 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
UFD1-205ENST00000459854 CAGE1Q8TC20 777 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 BACH2Q9BYV9 841 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 RABEP1Q15276 862 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 CDC45O75419 566 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 CLSTN1O94985 981 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 SPG7Q9UQ90 795 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 POLR3AO14802 1390 aaPredicted RBP11.66□□□□□ -0.54
UFD1-205ENST00000459854 FLT4P35916 1363 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 FRAT2O75474 233 aaPredicted RBP11.66□□□□□ -0.54
UFD1-205ENST00000459854 ANKRD24Q8TF21 1146 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 CLUAP1Q96AJ1 413 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 RBM10P98175 930 aaKnown RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
UFD1-205ENST00000459854 FOXD4L5Q5VV16 416 aaPredicted RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 FOXD4L4Q8WXT5 416 aaPredicted RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 TRIM29Q14134 588 aa11.65□□□□□ -0.54
UFD1-205ENST00000459854 NOL8Q76FK4 1167 aaKnown RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 OLFM4Q6UX06 510 aa11.65□□□□□ -0.55
UFD1-205ENST00000459854 IP6K1Q92551 441 aa11.65□□□□□ -0.55
UFD1-205ENST00000459854 HMOX1P09601 288 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 PDCP20941 246 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 ARHGEF28Q8N1W1 1705 aaKnown RBP11.64□□□□□ -0.55
UFD1-205ENST00000459854 NEXNQ0ZGT2 675 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 NRXN3Q9Y4C0 1643 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 HSPA1LP34931 641 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 PIP4K2AP48426 406 aaPredicted RBP11.64□□□□□ -0.55
UFD1-205ENST00000459854 GBP3Q9H0R5 595 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
UFD1-205ENST00000459854 PER1O15534 1290 aaPredicted RBP11.64□□□□□ -0.55
UFD1-205ENST00000459854 SMARCE1Q969G3 411 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 GORABQ5T7V8 394 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 GIMAP7Q8NHV1 300 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 BTG4Q9NY30 223 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 KNDC1Q76NI1 1749 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 TEFQ10587 303 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 TRIM5Q9C035 493 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
UFD1-205ENST00000459854 PES1O00541 588 aaKnown RBP11.63□□□□□ -0.55
UFD1-205ENST00000459854 SYNE3Q6ZMZ3 975 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
UFD1-205ENST00000459854 MAP3K19Q56UN5 1328 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 CCDC192P0DO97 292 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 AKAP17AQ02040 695 aaKnown RBP11.62□□□□□ -0.55
UFD1-205ENST00000459854 CCDC146Q8IYE0 955 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 DYNC1I1O14576 645 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 FCHSD2O94868 740 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 HSP90AB4PQ58FF6 505 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 CREBRFQ8IUR6 639 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 XRN1Q8IZH2 1706 aaKnown RBP11.62□□□□□ -0.55
UFD1-205ENST00000459854 IQCEQ6IPM2 695 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 IQSEC2Q5JU85 1478 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 AMOTQ4VCS5 1084 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 USP21Q9UK80 565 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 CHD2O14647 1828 aaKnown RBP11.61□□□□□ -0.55
UFD1-205ENST00000459854 HOXC9P31274 260 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 MCM4P33991 863 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
UFD1-205ENST00000459854 PRKAR2BP31323 418 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
UFD1-205ENST00000459854 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
UFD1-205ENST00000459854 EXOC5O00471 708 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 GOLGA6L10A6NI86 522 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 PDE4CQ08493 712 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 PDE3AQ14432 1141 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 PLIN1O60240 522 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 CT47B1P0C2W7 299 aaPredicted RBP11.6□□□□□ -0.55
UFD1-205ENST00000459854 PSMA5P28066 241 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 DNAJC2Q99543 621 aaKnown RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 ZMYND15Q9H091 742 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 ERLIN2O94905 339 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms