RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 PIGBQ92521 554 aa14.05□□□□□ -0.16
SYPL1-202ENST00000455385 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
SYPL1-202ENST00000455385 SYTL4Q96C24 671 aaPredicted RBP14.04□□□□□ -0.16
SYPL1-202ENST00000455385 LAS1LQ9Y4W2 734 aaKnown RBP14.04□□□□□ -0.16
SYPL1-202ENST00000455385 ITGB4P16144 1822 aa14.04□□□□□ -0.16
SYPL1-202ENST00000455385 DOT1LQ8TEK3 1739 aa14.03□□□□□ -0.16
SYPL1-202ENST00000455385 CHL1O00533 1208 aa14.03□□□□□ -0.16
SYPL1-202ENST00000455385 KCNQ3O43525 872 aa14.03□□□□□ -0.16
SYPL1-202ENST00000455385 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
SYPL1-202ENST00000455385 SIPA1L3O60292 1781 aaPredicted RBP14.03□□□□□ -0.16
SYPL1-202ENST00000455385 MRC1P22897 1456 aa14.03□□□□□ -0.16
SYPL1-202ENST00000455385 IL16Q14005 1332 aa14.02□□□□□ -0.16
SYPL1-202ENST00000455385 SBF2Q86WG5 1849 aa14.02□□□□□ -0.16
SYPL1-202ENST00000455385 SLFN5Q08AF3 891 aa14.02□□□□□ -0.16
SYPL1-202ENST00000455385 SLC39A6Q13433 755 aa14.02□□□□□ -0.16
SYPL1-202ENST00000455385 IFT57Q9NWB7 429 aa14.02□□□□□ -0.16
SYPL1-202ENST00000455385 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.16
SYPL1-202ENST00000455385 BTBD11A6QL63 1104 aa14.02□□□□□ -0.17
SYPL1-202ENST00000455385 CALD1Q05682 793 aaKnown RBP14.02□□□□□ -0.17
SYPL1-202ENST00000455385 TSR2Q969E8 191 aaKnown RBP14.02□□□□□ -0.17
SYPL1-202ENST00000455385 TRMT2AQ8IZ69 625 aaKnown RBP14.01□□□□□ -0.17
SYPL1-202ENST00000455385 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
SYPL1-202ENST00000455385 ASAP1Q9ULH1 1129 aa14.01□□□□□ -0.17
SYPL1-202ENST00000455385 TRIM37O94972 964 aa14□□□□□ -0.17
SYPL1-202ENST00000455385 GNAI1P63096 354 aa14□□□□□ -0.17
SYPL1-202ENST00000455385 ATG3Q9NT62 314 aa14□□□□□ -0.17
SYPL1-202ENST00000455385 TSPYL4Q9UJ04 414 aa14□□□□□ -0.17
SYPL1-202ENST00000455385 E9PSI1 815 aa13.99□□□□□ -0.17
SYPL1-202ENST00000455385 ZNF790Q6PG37 636 aa13.99□□□□□ -0.17
SYPL1-202ENST00000455385 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
SYPL1-202ENST00000455385 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
SYPL1-202ENST00000455385 BABAM1Q9NWV8 329 aa13.99□□□□□ -0.17
SYPL1-202ENST00000455385 FANCIQ9NVI1 1328 aa13.98□□□□□ -0.17
SYPL1-202ENST00000455385 NHSQ6T4R5 1651 aa13.98□□□□□ -0.17
SYPL1-202ENST00000455385 KRT24Q2M2I5 525 aa13.98□□□□□ -0.17
SYPL1-202ENST00000455385 EIF4A1P60842 406 aaKnown RBP13.97□□□□□ -0.17
SYPL1-202ENST00000455385 ILDR2Q71H61 639 aa13.97□□□□□ -0.17
SYPL1-202ENST00000455385 MYH16Q9H6N6 1097 aa13.97□□□□□ -0.17
SYPL1-202ENST00000455385 ZNF496Q96IT1 587 aaPredicted RBP13.96□□□□□ -0.17
SYPL1-202ENST00000455385 KDM3BQ7LBC6 1761 aa13.96□□□□□ -0.17
SYPL1-202ENST00000455385 C8orf58Q8NAV2 365 aa13.96□□□□□ -0.18
SYPL1-202ENST00000455385 BTAF1O14981 1849 aa13.96□□□□□ -0.18
SYPL1-202ENST00000455385 PTCD1O75127 700 aaKnown RBP13.95□□□□□ -0.18
SYPL1-202ENST00000455385 EXOSC9Q06265 439 aaKnown RBP13.95□□□□□ -0.18
SYPL1-202ENST00000455385 TSPYL6Q8N831 410 aa13.95□□□□□ -0.18
SYPL1-202ENST00000455385 SLC4A9Q96Q91 983 aa13.95□□□□□ -0.18
SYPL1-202ENST00000455385 TTC5Q8N0Z6 440 aa13.95□□□□□ -0.18
SYPL1-202ENST00000455385 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
SYPL1-202ENST00000455385 PAPPAQ13219 1627 aa13.94□□□□□ -0.18
SYPL1-202ENST00000455385 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
SYPL1-202ENST00000455385 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
SYPL1-202ENST00000455385 KCPQ6ZWJ8 1503 aa13.93□□□□□ -0.18
SYPL1-202ENST00000455385 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
SYPL1-202ENST00000455385 PALLDQ8WX93 1383 aa13.93□□□□□ -0.18
SYPL1-202ENST00000455385 GIGYF1O75420 1035 aaPredicted RBP13.92□□□□□ -0.18
SYPL1-202ENST00000455385 APBA3O96018 575 aa13.92□□□□□ -0.18
SYPL1-202ENST00000455385 SMARCC1Q92922 1105 aaPredicted RBP13.92□□□□□ -0.18
SYPL1-202ENST00000455385 FMNL2Q96PY5 1086 aa13.92□□□□□ -0.18
SYPL1-202ENST00000455385 UBR2Q8IWV8 1755 aa13.92□□□□□ -0.18
SYPL1-202ENST00000455385 KCNQ4P56696 695 aa13.92□□□□□ -0.18
SYPL1-202ENST00000455385 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
SYPL1-202ENST00000455385 SIK1P57059 783 aa13.91□□□□□ -0.18
SYPL1-202ENST00000455385 PROM2Q8N271 834 aa13.91□□□□□ -0.18
SYPL1-202ENST00000455385 VAMP4O75379 141 aa13.9□□□□□ -0.18
SYPL1-202ENST00000455385 USP16Q9Y5T5 823 aa13.9□□□□□ -0.18
SYPL1-202ENST00000455385 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
SYPL1-202ENST00000455385 PLSCR1O15162 318 aa13.89□□□□□ -0.19
SYPL1-202ENST00000455385 SNRPA1P09661 255 aaKnown RBP13.89□□□□□ -0.19
SYPL1-202ENST00000455385 ITPK1Q13572 414 aa13.89□□□□□ -0.19
SYPL1-202ENST00000455385 TWISTNBQ3B726 338 aaPredicted RBP13.89□□□□□ -0.19
SYPL1-202ENST00000455385 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
SYPL1-202ENST00000455385 DNAJC10Q8IXB1 793 aa13.89□□□□□ -0.19
SYPL1-202ENST00000455385 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
SYPL1-202ENST00000455385 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
SYPL1-202ENST00000455385 LY75O60449 1722 aa13.88□□□□□ -0.19
SYPL1-202ENST00000455385 EIF2S2P20042 333 aaKnown RBP13.88□□□□□ -0.19
SYPL1-202ENST00000455385 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
SYPL1-202ENST00000455385 DEFB132Q7Z7B7 95 aa13.88□□□□□ -0.19
SYPL1-202ENST00000455385 NECTIN2Q92692 538 aa13.88□□□□□ -0.19
SYPL1-202ENST00000455385 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
SYPL1-202ENST00000455385 TXNRD1Q16881 649 aa13.87□□□□□ -0.19
SYPL1-202ENST00000455385 UPF1Q92900 1129 aaKnown RBP eCLIP13.87□□□□□ -0.19
SYPL1-202ENST00000455385 C5P01031 1676 aa13.87□□□□□ -0.19
SYPL1-202ENST00000455385 CAMKK2Q96RR4 588 aa13.86□□□□□ -0.19
SYPL1-202ENST00000455385 CCNL1Q9UK58 526 aaPredicted RBP13.86□□□□□ -0.19
SYPL1-202ENST00000455385 HOXB7P09629 217 aa13.86□□□□□ -0.19
SYPL1-202ENST00000455385 CYP19A1P11511 503 aaPredicted RBP13.86□□□□□ -0.19
SYPL1-202ENST00000455385 TJP1Q07157 1748 aa13.85□□□□□ -0.19
SYPL1-202ENST00000455385 EZH2Q15910 746 aaKnown RBP13.85□□□□□ -0.19
SYPL1-202ENST00000455385 CCDC125Q86Z20 511 aa13.85□□□□□ -0.19
SYPL1-202ENST00000455385 LINC00116Q8NCU8 138 aa13.85□□□□□ -0.19
SYPL1-202ENST00000455385 A1BGP04217 495 aa13.85□□□□□ -0.19
SYPL1-202ENST00000455385 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
SYPL1-202ENST00000455385 SF3B2Q13435 895 aaKnown RBP13.85□□□□□ -0.19
SYPL1-202ENST00000455385 HDGFL1Q5TGJ6 251 aa13.85□□□□□ -0.19
SYPL1-202ENST00000455385 TEX13AQ9BXU3 409 aaPredicted RBP13.85□□□□□ -0.19
SYPL1-202ENST00000455385 CT47B1P0C2W7 299 aaPredicted RBP13.84□□□□□ -0.19
SYPL1-202ENST00000455385 PDIA6Q15084 440 aa13.84□□□□□ -0.19
SYPL1-202ENST00000455385 SLC27A3Q5K4L6 730 aa13.84□□□□□ -0.19
SYPL1-202ENST00000455385 ZNF831Q5JPB2 1677 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms