RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 NEUROD2Q15784 382 aa20.65■□□□□ 0.9
RBM39-219ENST00000453310 SIPA1L3O60292 1781 aaPredicted RBP20.64■□□□□ 0.9
RBM39-219ENST00000453310 EN1Q05925 392 aaPredicted RBP20.64■□□□□ 0.89
RBM39-219ENST00000453310 LMOD3Q0VAK6 560 aa20.64■□□□□ 0.89
RBM39-219ENST00000453310 NFATC2IPQ8NCF5 419 aa20.64■□□□□ 0.89
RBM39-219ENST00000453310 PLSCR1O15162 318 aa20.63■□□□□ 0.89
RBM39-219ENST00000453310 TEFQ10587 303 aa20.63■□□□□ 0.89
RBM39-219ENST00000453310 LY75O60449 1722 aa20.61■□□□□ 0.89
RBM39-219ENST00000453310 PAPPAQ13219 1627 aa20.61■□□□□ 0.89
RBM39-219ENST00000453310 CAMKK2Q96RR4 588 aa20.61■□□□□ 0.89
RBM39-219ENST00000453310 THUMPD2Q9BTF0 503 aaKnown RBP20.61■□□□□ 0.89
RBM39-219ENST00000453310 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
RBM39-219ENST00000453310 PALLDQ8WX93 1383 aa20.6■□□□□ 0.89
RBM39-219ENST00000453310 EZH2Q15910 746 aaKnown RBP20.6■□□□□ 0.89
RBM39-219ENST00000453310 SMARCC1Q92922 1105 aaPredicted RBP20.6■□□□□ 0.89
RBM39-219ENST00000453310 ATG3Q9NT62 314 aa20.6■□□□□ 0.89
RBM39-219ENST00000453310 TRIM35Q9UPQ4 493 aa20.6■□□□□ 0.89
RBM39-219ENST00000453310 RREB1Q92766 1687 aa20.6■□□□□ 0.89
RBM39-219ENST00000453310 SENP3-EIF4A1A0A087X0R7 540 aa20.59■□□□□ 0.89
RBM39-219ENST00000453310 TXNRD1Q16881 649 aa20.57■□□□□ 0.88
RBM39-219ENST00000453310 NUP188Q5SRE5 1749 aa20.56■□□□□ 0.88
RBM39-219ENST00000453310 UBR2Q8IWV8 1755 aa20.55■□□□□ 0.88
RBM39-219ENST00000453310 BTBD11A6QL63 1104 aa20.55■□□□□ 0.88
RBM39-219ENST00000453310 SLC39A6Q13433 755 aa20.55■□□□□ 0.88
RBM39-219ENST00000453310 TAF7Q15545 349 aaPredicted RBP20.55■□□□□ 0.88
RBM39-219ENST00000453310 PROM2Q8N271 834 aa20.55■□□□□ 0.88
RBM39-219ENST00000453310 CCDC27Q2M243 656 aa20.54■□□□□ 0.88
RBM39-219ENST00000453310 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
RBM39-219ENST00000453310 KCPQ6ZWJ8 1503 aa20.53■□□□□ 0.88
RBM39-219ENST00000453310 LOC102724428A0A0B4J2F2 783 aa20.53■□□□□ 0.88
RBM39-219ENST00000453310 SIK1P57059 783 aa20.53■□□□□ 0.88
RBM39-219ENST00000453310 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
RBM39-219ENST00000453310 CCNL1Q9UK58 526 aaPredicted RBP20.53■□□□□ 0.88
RBM39-219ENST00000453310 KDM3BQ7LBC6 1761 aa20.53■□□□□ 0.88
RBM39-219ENST00000453310 ZNF790Q6PG37 636 aa20.52■□□□□ 0.88
RBM39-219ENST00000453310 TTC5Q8N0Z6 440 aa20.52■□□□□ 0.88
RBM39-219ENST00000453310 LRRC4BQ9NT99 713 aa20.52■□□□□ 0.88
RBM39-219ENST00000453310 SALL2Q9Y467 1007 aaPredicted RBP20.52■□□□□ 0.88
RBM39-219ENST00000453310 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
RBM39-219ENST00000453310 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
RBM39-219ENST00000453310 KCNQ4P56696 695 aa20.51■□□□□ 0.87
RBM39-219ENST00000453310 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
RBM39-219ENST00000453310 NGEFQ8N5V2 710 aa20.51■□□□□ 0.87
RBM39-219ENST00000453310 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
RBM39-219ENST00000453310 KCNQ3O43525 872 aa20.5■□□□□ 0.87
RBM39-219ENST00000453310 CALD1Q05682 793 aaKnown RBP20.5■□□□□ 0.87
RBM39-219ENST00000453310 MIS18AQ9NYP9 233 aa20.5■□□□□ 0.87
RBM39-219ENST00000453310 C5P01031 1676 aa20.5■□□□□ 0.87
RBM39-219ENST00000453310 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
RBM39-219ENST00000453310 SLC4A9Q96Q91 983 aa20.49■□□□□ 0.87
RBM39-219ENST00000453310 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
RBM39-219ENST00000453310 CICQ96RK0 1608 aaPredicted RBP20.49■□□□□ 0.87
RBM39-219ENST00000453310 TJP1Q07157 1748 aa20.48■□□□□ 0.87
RBM39-219ENST00000453310 ATP6V1AP38606 617 aa20.48■□□□□ 0.87
RBM39-219ENST00000453310 BABAM1Q9NWV8 329 aa20.48■□□□□ 0.87
RBM39-219ENST00000453310 ZNF496Q96IT1 587 aaPredicted RBP20.47■□□□□ 0.87
RBM39-219ENST00000453310 FMNL2Q96PY5 1086 aa20.47■□□□□ 0.87
RBM39-219ENST00000453310 LAS1LQ9Y4W2 734 aaKnown RBP20.47■□□□□ 0.87
RBM39-219ENST00000453310 ITPK1Q13572 414 aa20.46■□□□□ 0.87
RBM39-219ENST00000453310 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
RBM39-219ENST00000453310 COL5A3P25940 1745 aaPredicted RBP20.46■□□□□ 0.87
RBM39-219ENST00000453310 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
RBM39-219ENST00000453310 CHL1O00533 1208 aa20.45■□□□□ 0.86
RBM39-219ENST00000453310 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.86
RBM39-219ENST00000453310 IFT57Q9NWB7 429 aa20.45■□□□□ 0.86
RBM39-219ENST00000453310 C4BP0C0L5 1744 aa20.44■□□□□ 0.86
RBM39-219ENST00000453310 ZNF853P0CG23 659 aa20.44■□□□□ 0.86
RBM39-219ENST00000453310 LINC00116Q8NCU8 138 aa20.44■□□□□ 0.86
RBM39-219ENST00000453310 ANO8Q9HCE9 1232 aaPredicted RBP20.44■□□□□ 0.86
RBM39-219ENST00000453310 IL16Q14005 1332 aa20.44■□□□□ 0.86
RBM39-219ENST00000453310 HMGB2P26583 209 aaKnown RBP20.43■□□□□ 0.86
RBM39-219ENST00000453310 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
RBM39-219ENST00000453310 GNAI1P63096 354 aa20.43■□□□□ 0.86
RBM39-219ENST00000453310 WDR63Q8IWG1 891 aa20.43■□□□□ 0.86
RBM39-219ENST00000453310 ZNF521Q96K83 1311 aa20.43■□□□□ 0.86
RBM39-219ENST00000453310 NBPF14Q5TI25 921 aa20.42■□□□□ 0.86
RBM39-219ENST00000453310 DNAJC10Q8IXB1 793 aa20.42■□□□□ 0.86
RBM39-219ENST00000453310 MBIPQ9NS73 344 aa20.42■□□□□ 0.86
RBM39-219ENST00000453310 ZNF827Q17R98 1081 aa20.41■□□□□ 0.86
RBM39-219ENST00000453310 STK32BQ9NY57 414 aa20.41■□□□□ 0.86
RBM39-219ENST00000453310 AKT1S1Q96B36 256 aa20.4■□□□□ 0.86
RBM39-219ENST00000453310 TUBGCP6Q96RT7 1819 aa20.39■□□□□ 0.86
RBM39-219ENST00000453310 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.86
RBM39-219ENST00000453310 CNTNAP4Q9C0A0 1308 aa20.39■□□□□ 0.85
RBM39-219ENST00000453310 SNRPA1P09661 255 aaKnown RBP20.39■□□□□ 0.85
RBM39-219ENST00000453310 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
RBM39-219ENST00000453310 SLC15A2Q16348 729 aa20.39■□□□□ 0.85
RBM39-219ENST00000453310 MYH14Q7Z406 1995 aaKnown RBP20.38■□□□□ 0.85
RBM39-219ENST00000453310 PRAMEF22A3QJZ6 481 aa20.38■□□□□ 0.85
RBM39-219ENST00000453310 CYP19A1P11511 503 aaPredicted RBP20.38■□□□□ 0.85
RBM39-219ENST00000453310 AK7Q96M32 723 aa20.38■□□□□ 0.85
RBM39-219ENST00000453310 TEX13AQ9BXU3 409 aaPredicted RBP20.38■□□□□ 0.85
RBM39-219ENST00000453310 QSER1Q2KHR3 1735 aa20.37■□□□□ 0.85
RBM39-219ENST00000453310 GIGYF1O75420 1035 aaPredicted RBP20.37■□□□□ 0.85
RBM39-219ENST00000453310 STARD3NLO95772 234 aa20.37■□□□□ 0.85
RBM39-219ENST00000453310 CRKLP46109 303 aaKnown RBP20.37■□□□□ 0.85
RBM39-219ENST00000453310 TSR2Q969E8 191 aaKnown RBP20.37■□□□□ 0.85
RBM39-219ENST00000453310 UBR3Q6ZT12 1888 aa20.37■□□□□ 0.85
RBM39-219ENST00000453310 R3HDM1Q15032 1099 aaKnown RBP20.36■□□□□ 0.85
RBM39-219ENST00000453310 KRT24Q2M2I5 525 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms