RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 OTUD7AQ8TE49 926 aaPredicted RBP14.68□□□□□ -0.06
VTA1-203ENST00000452973 USP54Q70EL1 1684 aa14.68□□□□□ -0.06
VTA1-203ENST00000452973 EIF4A1P60842 406 aaKnown RBP14.68□□□□□ -0.06
VTA1-203ENST00000452973 AMOTQ4VCS5 1084 aa14.68□□□□□ -0.06
VTA1-203ENST00000452973 BECN1Q14457 450 aa14.67□□□□□ -0.06
VTA1-203ENST00000452973 CHPF2Q9P2E5 772 aa14.67□□□□□ -0.06
VTA1-203ENST00000452973 MST1RQ04912 1400 aa14.67□□□□□ -0.06
VTA1-203ENST00000452973 RNMTO43148 476 aaKnown RBP14.67□□□□□ -0.06
VTA1-203ENST00000452973 BMP2KLQ5H9B9 411 aa14.67□□□□□ -0.06
VTA1-203ENST00000452973 RAPGEF4Q8WZA2 1011 aa14.67□□□□□ -0.06
VTA1-203ENST00000452973 ERBB3P21860 1342 aa14.66□□□□□ -0.06
VTA1-203ENST00000452973 CEMIPQ8WUJ3 1361 aa14.66□□□□□ -0.06
VTA1-203ENST00000452973 ATP10DQ9P241 1426 aa14.66□□□□□ -0.06
VTA1-203ENST00000452973 GNAI2P04899 355 aa14.66□□□□□ -0.06
VTA1-203ENST00000452973 EXOC6BQ9Y2D4 811 aa14.66□□□□□ -0.06
VTA1-203ENST00000452973 PLEKHM2Q8IWE5 1019 aa14.65□□□□□ -0.06
VTA1-203ENST00000452973 NPHP3Q7Z494 1330 aa14.65□□□□□ -0.06
VTA1-203ENST00000452973 PXDNQ92626 1479 aa14.65□□□□□ -0.06
VTA1-203ENST00000452973 PRAMEF22A3QJZ6 481 aa14.65□□□□□ -0.06
VTA1-203ENST00000452973 HMMRO75330 724 aa14.65□□□□□ -0.06
VTA1-203ENST00000452973 BABAM1Q9NWV8 329 aa14.65□□□□□ -0.06
VTA1-203ENST00000452973 LRRFIP2Q9Y608 721 aaKnown RBP14.64□□□□□ -0.07
VTA1-203ENST00000452973 GSPT1P15170 499 aaKnown RBP14.63□□□□□ -0.07
VTA1-203ENST00000452973 SLC39A6Q13433 755 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 TBC1D9Q6ZT07 1266 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 TBC1D2Q9BYX2 928 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 SLIT3O75094 1523 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 PNMA6EA0A0J9YXQ4 647 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 PI4KAP2A4QPH2 592 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 PI4KAP1Q8N8J0 262 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 LRRC37A3O60309 1634 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 GNAI3P08754 354 aa14.63□□□□□ -0.07
VTA1-203ENST00000452973 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
VTA1-203ENST00000452973 UBTFL1P0CB47 393 aaPredicted RBP14.62□□□□□ -0.07
VTA1-203ENST00000452973 NFKBIBQ15653 356 aa14.62□□□□□ -0.07
VTA1-203ENST00000452973 TATP17735 454 aaPredicted RBP14.61□□□□□ -0.07
VTA1-203ENST00000452973 TSHZ3Q63HK5 1081 aa14.61□□□□□ -0.07
VTA1-203ENST00000452973 USP44Q9H0E7 712 aa14.61□□□□□ -0.07
VTA1-203ENST00000452973 RGPD5Q99666 1765 aa14.61□□□□□ -0.07
VTA1-203ENST00000452973 TRPM3Q9HCF6 1732 aaPredicted RBP14.61□□□□□ -0.07
VTA1-203ENST00000452973 ZNF335Q9H4Z2 1342 aaPredicted RBP14.61□□□□□ -0.07
VTA1-203ENST00000452973 DEKP35659 375 aaKnown RBP14.61□□□□□ -0.07
VTA1-203ENST00000452973 AIMP1Q12904 312 aaKnown RBP14.61□□□□□ -0.07
VTA1-203ENST00000452973 SRCIN1Q9C0H9 1055 aa14.61□□□□□ -0.07
VTA1-203ENST00000452973 MED1Q15648 1581 aaPredicted RBP14.6□□□□□ -0.07
VTA1-203ENST00000452973 PROSER3Q2NL68 480 aa14.6□□□□□ -0.07
VTA1-203ENST00000452973 BRINP3Q76B58 766 aa14.6□□□□□ -0.07
VTA1-203ENST00000452973 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
VTA1-203ENST00000452973 TTC22Q5TAA0 569 aa14.59□□□□□ -0.07
VTA1-203ENST00000452973 KIF1AQ12756 1690 aa14.59□□□□□ -0.07
VTA1-203ENST00000452973 SOS1Q07889 1333 aaPredicted RBP14.59□□□□□ -0.07
VTA1-203ENST00000452973 CDC45O75419 566 aa14.59□□□□□ -0.07
VTA1-203ENST00000452973 GIGYF1O75420 1035 aaPredicted RBP14.59□□□□□ -0.07
VTA1-203ENST00000452973 KDM4FA0A1W2PPD8 638 aa14.59□□□□□ -0.07
VTA1-203ENST00000452973 NBPF7P0C2Y1 421 aaPredicted RBP14.59□□□□□ -0.07
VTA1-203ENST00000452973 DNAAF4Q8WXU2 420 aa14.59□□□□□ -0.07
VTA1-203ENST00000452973 SPATA31A3Q5VYP0 1347 aa14.58□□□□□ -0.07
VTA1-203ENST00000452973 FRAT2O75474 233 aaPredicted RBP14.58□□□□□ -0.08
VTA1-203ENST00000452973 DBF4Q9UBU7 674 aaPredicted RBP14.58□□□□□ -0.08
VTA1-203ENST00000452973 PRDM11Q9NQV5 511 aa14.58□□□□□ -0.08
VTA1-203ENST00000452973 SPG7Q9UQ90 795 aa14.58□□□□□ -0.08
VTA1-203ENST00000452973 FAM208AQ9UK61 1670 aaKnown RBP14.57□□□□□ -0.08
VTA1-203ENST00000452973 SDSP20132 328 aa14.57□□□□□ -0.08
VTA1-203ENST00000452973 ATP8B2P98198 1209 aa14.57□□□□□ -0.08
VTA1-203ENST00000452973 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
VTA1-203ENST00000452973 TNS3Q68CZ2 1445 aa14.57□□□□□ -0.08
VTA1-203ENST00000452973 MYL6BP14649 208 aa14.57□□□□□ -0.08
VTA1-203ENST00000452973 PIP4K2AP48426 406 aaPredicted RBP14.57□□□□□ -0.08
VTA1-203ENST00000452973 LRRCC1Q9C099 1032 aa14.57□□□□□ -0.08
VTA1-203ENST00000452973 IL1RAPL2Q9NP60 686 aa14.57□□□□□ -0.08
VTA1-203ENST00000452973 MAP3K2Q9Y2U5 619 aa14.57□□□□□ -0.08
VTA1-203ENST00000452973 HOXB7P09629 217 aa14.56□□□□□ -0.08
VTA1-203ENST00000452973 PHKG2P15735 406 aa14.56□□□□□ -0.08
VTA1-203ENST00000452973 PHRF1Q9P1Y6 1649 aaKnown RBP14.56□□□□□ -0.08
VTA1-203ENST00000452973 DCCP43146 1447 aa14.56□□□□□ -0.08
VTA1-203ENST00000452973 PPP1R42Q7Z4L9 355 aa14.56□□□□□ -0.08
VTA1-203ENST00000452973 ZNF790Q6PG37 636 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 ALS2Q96Q42 1657 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 SRGAP3O43295 1099 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 SURF6O75683 361 aaKnown RBP14.55□□□□□ -0.08
VTA1-203ENST00000452973 CWF19L2Q2TBE0 894 aaKnown RBP14.55□□□□□ -0.08
VTA1-203ENST00000452973 BEND3Q5T5X7 828 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 TOM1L2Q6ZVM7 507 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 HSCBQ8IWL3 235 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 IFNL2Q8IZJ0 200 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
VTA1-203ENST00000452973 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 SLC52A2Q9HAB3 445 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
VTA1-203ENST00000452973 C9orf78Q9NZ63 289 aaPredicted RBP14.55□□□□□ -0.08
VTA1-203ENST00000452973 CYP27B1O15528 508 aa14.54□□□□□ -0.08
VTA1-203ENST00000452973 MEGF6O75095 1541 aa14.54□□□□□ -0.08
VTA1-203ENST00000452973 RBM25P49756 843 aaKnown RBP14.54□□□□□ -0.08
VTA1-203ENST00000452973 PDE1AP54750 535 aa14.54□□□□□ -0.08
VTA1-203ENST00000452973 USP35Q9P2H5 1018 aa14.54□□□□□ -0.08
VTA1-203ENST00000452973 LMO7Q8WWI1 1683 aa14.53□□□□□ -0.08
VTA1-203ENST00000452973 NCAPD2Q15021 1401 aa14.53□□□□□ -0.08
VTA1-203ENST00000452973 ADCY9O60503 1353 aa14.53□□□□□ -0.08
VTA1-203ENST00000452973 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
VTA1-203ENST00000452973 TTC5Q8N0Z6 440 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms