RNA–Protein interactions for RNA: ENST00000449311.5

CAP1-216, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-216ENST00000449311 ATG3Q9NT62 314 aa23.23■■□□□ 1.31
CAP1-216ENST00000449311 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
CAP1-216ENST00000449311 CHD4Q14839 1912 aa23.21■■□□□ 1.31
CAP1-216ENST00000449311 AK7Q96M32 723 aa23.2■■□□□ 1.3
CAP1-216ENST00000449311 COL3A1P02461 1466 aaPredicted RBP23.19■■□□□ 1.3
CAP1-216ENST00000449311 MSH5O43196 834 aa23.19■■□□□ 1.3
CAP1-216ENST00000449311 ATP6V1AP38606 617 aa23.19■■□□□ 1.3
CAP1-216ENST00000449311 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
CAP1-216ENST00000449311 CICQ96RK0 1608 aaPredicted RBP23.19■■□□□ 1.3
CAP1-216ENST00000449311 CABP4P57796 275 aa23.18■■□□□ 1.3
CAP1-216ENST00000449311 AKAP4Q5JQC9 854 aa23.18■■□□□ 1.3
CAP1-216ENST00000449311 SSFA2P28290 1259 aa23.17■■□□□ 1.3
CAP1-216ENST00000449311 LINC00116Q8NCU8 138 aa23.17■■□□□ 1.3
CAP1-216ENST00000449311 ITPK1Q13572 414 aa23.16■■□□□ 1.3
CAP1-216ENST00000449311 HMOX1P09601 288 aa23.14■■□□□ 1.29
CAP1-216ENST00000449311 MYH14Q7Z406 1995 aaKnown RBP23.14■■□□□ 1.29
CAP1-216ENST00000449311 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
CAP1-216ENST00000449311 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
CAP1-216ENST00000449311 MRC1P22897 1456 aa23.12■■□□□ 1.29
CAP1-216ENST00000449311 TJP1Q07157 1748 aa23.12■■□□□ 1.29
CAP1-216ENST00000449311 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
CAP1-216ENST00000449311 SLC4A9Q96Q91 983 aa23.12■■□□□ 1.29
CAP1-216ENST00000449311 RBM42Q9BTD8 480 aaKnown RBP23.12■■□□□ 1.29
CAP1-216ENST00000449311 YY1P25490 414 aa23.11■■□□□ 1.29
CAP1-216ENST00000449311 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
CAP1-216ENST00000449311 GNPATO15228 680 aa23.1■■□□□ 1.29
CAP1-216ENST00000449311 CNGB1Q14028 1251 aaPredicted RBP23.1■■□□□ 1.29
CAP1-216ENST00000449311 MSL1Q68DK7 614 aa23.1■■□□□ 1.29
CAP1-216ENST00000449311 PHF14O94880 888 aa23.09■■□□□ 1.29
CAP1-216ENST00000449311 MTHFSDQ2M296 383 aaKnown RBP23.09■■□□□ 1.29
CAP1-216ENST00000449311 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.29
CAP1-216ENST00000449311 KLHL34Q8N239 644 aa23.08■■□□□ 1.29
CAP1-216ENST00000449311 CFAP53Q96M91 514 aa23.08■■□□□ 1.29
CAP1-216ENST00000449311 SLC52A2Q9HAB3 445 aa23.08■■□□□ 1.29
CAP1-216ENST00000449311 C4AP0C0L4 1744 aa23.08■■□□□ 1.28
CAP1-216ENST00000449311 SIPA1L3O60292 1781 aaPredicted RBP23.07■■□□□ 1.28
CAP1-216ENST00000449311 RNMTO43148 476 aaKnown RBP23.07■■□□□ 1.28
CAP1-216ENST00000449311 LGR6Q9HBX8 967 aa23.07■■□□□ 1.28
CAP1-216ENST00000449311 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
CAP1-216ENST00000449311 UBR2Q8IWV8 1755 aa23.06■■□□□ 1.28
CAP1-216ENST00000449311 U2SURPO15042 1029 aaKnown RBP23.06■■□□□ 1.28
CAP1-216ENST00000449311 ADRA2BP18089 450 aa23.06■■□□□ 1.28
CAP1-216ENST00000449311 SMIM5Q71RC9 77 aa23.05■■□□□ 1.28
CAP1-216ENST00000449311 CD2APQ9Y5K6 639 aa23.05■■□□□ 1.28
CAP1-216ENST00000449311 KIF13BQ9NQT8 1826 aa23.04■■□□□ 1.28
CAP1-216ENST00000449311 PTCD1O75127 700 aaKnown RBP23.04■■□□□ 1.28
CAP1-216ENST00000449311 RPS6KA4O75676 772 aa23.04■■□□□ 1.28
CAP1-216ENST00000449311 PPP2R1AP30153 589 aa23.04■■□□□ 1.28
CAP1-216ENST00000449311 TRAPPC3LQ5T215 181 aa23.04■■□□□ 1.28
CAP1-216ENST00000449311 NLGN2Q8NFZ4 835 aa23.03■■□□□ 1.28
CAP1-216ENST00000449311 GAS2L2Q8NHY3 880 aa23.03■■□□□ 1.28
CAP1-216ENST00000449311 NUDCQ9Y266 331 aa23.03■■□□□ 1.28
CAP1-216ENST00000449311 GPR162Q16538 588 aa23.02■■□□□ 1.28
CAP1-216ENST00000449311 KCPQ6ZWJ8 1503 aa23■■□□□ 1.27
CAP1-216ENST00000449311 ARHGEF1Q92888 912 aaKnown RBP23■■□□□ 1.27
CAP1-216ENST00000449311 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
CAP1-216ENST00000449311 NLGN1Q8N2Q7 840 aa22.99■■□□□ 1.27
CAP1-216ENST00000449311 CRKLP46109 303 aaKnown RBP22.98■■□□□ 1.27
CAP1-216ENST00000449311 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
CAP1-216ENST00000449311 RFC4P35249 363 aa22.97■■□□□ 1.27
CAP1-216ENST00000449311 VSIG10Q8N0Z9 540 aa22.97■■□□□ 1.27
CAP1-216ENST00000449311 PRKAR2BP31323 418 aa22.96■■□□□ 1.27
CAP1-216ENST00000449311 GRIN3BO60391 1043 aa22.95■■□□□ 1.26
CAP1-216ENST00000449311 FCHSD2O94868 740 aa22.95■■□□□ 1.26
CAP1-216ENST00000449311 SLC39A6Q13433 755 aa22.95■■□□□ 1.26
CAP1-216ENST00000449311 IL17REQ8NFR9 667 aa22.95■■□□□ 1.26
CAP1-216ENST00000449311 KIAA1551Q9HCM1 1747 aa22.94■■□□□ 1.26
CAP1-216ENST00000449311 MMP10P09238 476 aa22.94■■□□□ 1.26
CAP1-216ENST00000449311 GYS1P13807 737 aa22.94■■□□□ 1.26
CAP1-216ENST00000449311 INTS5Q6P9B9 1019 aaKnown RBP22.94■■□□□ 1.26
CAP1-216ENST00000449311 DNAJC10Q8IXB1 793 aa22.94■■□□□ 1.26
CAP1-216ENST00000449311 PHACTR3Q96KR7 559 aa22.94■■□□□ 1.26
CAP1-216ENST00000449311 CEMIPQ8WUJ3 1361 aa22.93■■□□□ 1.26
CAP1-216ENST00000449311 UTRNP46939 3433 aa22.93■■□□□ 1.26
CAP1-216ENST00000449311 DLG5Q8TDM6 1919 aa22.93■■□□□ 1.26
CAP1-216ENST00000449311 U2AF1L5P0DN76 240 aaPredicted RBP22.93■■□□□ 1.26
CAP1-216ENST00000449311 U2AF1Q01081 240 aaKnown RBP eCLIP22.93■■□□□ 1.26
CAP1-216ENST00000449311 TEFQ10587 303 aa22.93■■□□□ 1.26
CAP1-216ENST00000449311 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
CAP1-216ENST00000449311 CYP19A1P11511 503 aaPredicted RBP22.92■■□□□ 1.26
CAP1-216ENST00000449311 CCDC87Q9NVE4 849 aa22.92■■□□□ 1.26
CAP1-216ENST00000449311 N4BP2Q86UW6 1770 aaPredicted RBP22.91■■□□□ 1.26
CAP1-216ENST00000449311 YBX3P16989 372 aaKnown RBP eCLIP22.91■■□□□ 1.261e-6■□□□□ 10.4
CAP1-216ENST00000449311 TTC5Q8N0Z6 440 aa22.91■■□□□ 1.26
CAP1-216ENST00000449311 USP42Q9H9J4 1324 aaKnown RBP22.9■■□□□ 1.26
CAP1-216ENST00000449311 BRCA1P38398 1863 aaKnown RBP22.9■■□□□ 1.26
CAP1-216ENST00000449311 SOS1Q07889 1333 aaPredicted RBP22.88■■□□□ 1.25
CAP1-216ENST00000449311 ZNF790Q6PG37 636 aa22.88■■□□□ 1.25
CAP1-216ENST00000449311 TGFB2P61812 414 aa22.87■■□□□ 1.25
CAP1-216ENST00000449311 ZNF784Q8NCA9 323 aaPredicted RBP22.87■■□□□ 1.25
CAP1-216ENST00000449311 TEX13AQ9BXU3 409 aaPredicted RBP22.87■■□□□ 1.25
CAP1-216ENST00000449311 PARP3Q9Y6F1 533 aa22.87■■□□□ 1.25
CAP1-216ENST00000449311 C10orf71Q711Q0 1435 aa22.87■■□□□ 1.25
CAP1-216ENST00000449311 HTATSF1O43719 755 aaKnown RBP22.86■■□□□ 1.25
CAP1-216ENST00000449311 AFDNP55196 1824 aaKnown RBP22.86■■□□□ 1.25
CAP1-216ENST00000449311 HEG1Q9ULI3 1381 aa22.86■■□□□ 1.25
CAP1-216ENST00000449311 STARD3NLO95772 234 aa22.85■■□□□ 1.25
CAP1-216ENST00000449311 ZNF496Q96IT1 587 aaPredicted RBP22.85■■□□□ 1.25
CAP1-216ENST00000449311 SRP68Q9UHB9 627 aaKnown RBP22.85■■□□□ 1.25
CAP1-216ENST00000449311 ZPR1O75312 459 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms