RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 KCNA4P22459 653 aa13.53□□□□□ -0.24
BRPF3-206ENST00000449261 STK38Q15208 465 aa13.53□□□□□ -0.24
BRPF3-206ENST00000449261 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
BRPF3-206ENST00000449261 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
BRPF3-206ENST00000449261 ADAMTS12P58397 1594 aa13.53□□□□□ -0.24
BRPF3-206ENST00000449261 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.24
BRPF3-206ENST00000449261 MX1P20591 662 aa13.52□□□□□ -0.24
BRPF3-206ENST00000449261 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.24
BRPF3-206ENST00000449261 RNF214Q8ND24 703 aa13.52□□□□□ -0.24
BRPF3-206ENST00000449261 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.24
BRPF3-206ENST00000449261 CGNQ9P2M7 1197 aaKnown RBP13.52□□□□□ -0.24
BRPF3-206ENST00000449261 ABCF2Q9UG63 623 aa13.52□□□□□ -0.24
BRPF3-206ENST00000449261 ABCC10Q5T3U5 1492 aa13.52□□□□□ -0.24
BRPF3-206ENST00000449261 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.24
BRPF3-206ENST00000449261 RAB11FIP3O75154 756 aa13.52□□□□□ -0.24
BRPF3-206ENST00000449261 TRIM27P14373 513 aa13.52□□□□□ -0.24
BRPF3-206ENST00000449261 TDO2P48775 406 aa13.52□□□□□ -0.24
BRPF3-206ENST00000449261 RIMS2Q9UQ26 1411 aa13.52□□□□□ -0.24
BRPF3-206ENST00000449261 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.25
BRPF3-206ENST00000449261 CAVIN1Q6NZI2 390 aaKnown RBP13.52□□□□□ -0.25
BRPF3-206ENST00000449261 JAKMIP1Q96N16 626 aaKnown RBP13.52□□□□□ -0.25
BRPF3-206ENST00000449261 KIAA0556O60303 1618 aa13.52□□□□□ -0.25
BRPF3-206ENST00000449261 ZPR1O75312 459 aa13.52□□□□□ -0.25
BRPF3-206ENST00000449261 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
BRPF3-206ENST00000449261 CEBPZQ03701 1054 aaKnown RBP13.51□□□□□ -0.25
BRPF3-206ENST00000449261 LRRFIP2Q9Y608 721 aaKnown RBP13.51□□□□□ -0.25
BRPF3-206ENST00000449261 TTC21AQ8NDW8 1320 aa13.51□□□□□ -0.25
BRPF3-206ENST00000449261 ZNF396Q96N95 335 aaPredicted RBP13.51□□□□□ -0.25
BRPF3-206ENST00000449261 RBM28Q9NW13 759 aaKnown RBP13.51□□□□□ -0.25
BRPF3-206ENST00000449261 NAT10Q9H0A0 1025 aaKnown RBP13.51□□□□□ -0.25
BRPF3-206ENST00000449261 AKAP2Q9Y2D5 859 aa13.51□□□□□ -0.25
BRPF3-206ENST00000449261 A0A087WZG4 1122 aa13.51□□□□□ -0.25
BRPF3-206ENST00000449261 KIF20AO95235 890 aa13.51□□□□□ -0.25
BRPF3-206ENST00000449261 RBM5P52756 815 aaKnown RBP eCLIP13.51□□□□□ -0.25
BRPF3-206ENST00000449261 NUP133Q8WUM0 1156 aa13.51□□□□□ -0.25
BRPF3-206ENST00000449261 PAIP2Q9BPZ3 127 aaKnown RBP13.51□□□□□ -0.25
BRPF3-206ENST00000449261 KRT32Q14532 448 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 HSP90AB3PQ58FF7 597 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 PPP4R3BQ5MIZ7 849 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 MBIPQ9NS73 344 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 ITSN2Q9NZM3 1697 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 MSH6P52701 1360 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 CCDC69A6NI79 296 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 BOLA2Q9H3K6 86 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 ZBTB3Q9H5J0 574 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 TRMT112Q9UI30 125 aaKnown RBP13.5□□□□□ -0.25
BRPF3-206ENST00000449261 IFIT5Q13325 482 aaKnown RBP13.5□□□□□ -0.25
BRPF3-206ENST00000449261 NUP160Q12769 1436 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 PRAG1Q86YV5 1406 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 IFIT1P09914 478 aaKnown RBP13.5□□□□□ -0.25
BRPF3-206ENST00000449261 NOM1Q5C9Z4 860 aaKnown RBP13.5□□□□□ -0.25
BRPF3-206ENST00000449261 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
BRPF3-206ENST00000449261 GTPBP4Q9BZE4 634 aaKnown RBP13.5□□□□□ -0.25
BRPF3-206ENST00000449261 RALGAPBQ86X10 1494 aa13.5□□□□□ -0.25
BRPF3-206ENST00000449261 PDRG1Q9NUG6 133 aa13.49□□□□□ -0.25
BRPF3-206ENST00000449261 PTPRCP08575 1304 aa13.49□□□□□ -0.25
BRPF3-206ENST00000449261 NPHP3Q7Z494 1330 aa13.49□□□□□ -0.25
BRPF3-206ENST00000449261 JMYQ8N9B5 988 aa13.49□□□□□ -0.25
BRPF3-206ENST00000449261 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
BRPF3-206ENST00000449261 AIDAQ96BJ3 306 aa13.49□□□□□ -0.25
BRPF3-206ENST00000449261 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
BRPF3-206ENST00000449261 TXLNAP40222 546 aa13.48□□□□□ -0.25
BRPF3-206ENST00000449261 GPTP24298 496 aa13.48□□□□□ -0.25
BRPF3-206ENST00000449261 ZSCAN29Q8IWY8 852 aaPredicted RBP13.48□□□□□ -0.25
BRPF3-206ENST00000449261 WDR62O43379 1518 aa13.48□□□□□ -0.25
BRPF3-206ENST00000449261 IL16Q14005 1332 aa13.48□□□□□ -0.25
BRPF3-206ENST00000449261 CCDC8Q9H0W5 538 aaPredicted RBP13.48□□□□□ -0.25
BRPF3-206ENST00000449261 NASPP49321 788 aaPredicted RBP13.47□□□□□ -0.25
BRPF3-206ENST00000449261 MRE11P49959 708 aa13.47□□□□□ -0.25
BRPF3-206ENST00000449261 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
BRPF3-206ENST00000449261 PI4KAP2A4QPH2 592 aa13.47□□□□□ -0.25
BRPF3-206ENST00000449261 PI4KAP1Q8N8J0 262 aa13.47□□□□□ -0.25
BRPF3-206ENST00000449261 ZSCAN31Q96LW9 406 aaPredicted RBP13.47□□□□□ -0.25
BRPF3-206ENST00000449261 TEX13AQ9BXU3 409 aaPredicted RBP13.47□□□□□ -0.25
BRPF3-206ENST00000449261 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
BRPF3-206ENST00000449261 ANXA1P04083 346 aa13.47□□□□□ -0.25
BRPF3-206ENST00000449261 KRT85P78386 507 aa13.47□□□□□ -0.25
BRPF3-206ENST00000449261 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
BRPF3-206ENST00000449261 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.25
BRPF3-206ENST00000449261 TCOF1Q13428 1488 aaKnown RBP13.46□□□□□ -0.25
BRPF3-206ENST00000449261 CCDC70Q6NSX1 233 aa13.46□□□□□ -0.25
BRPF3-206ENST00000449261 MAPKBP1O60336 1514 aa13.46□□□□□ -0.25
BRPF3-206ENST00000449261 IMMTQ16891 758 aaKnown RBP13.46□□□□□ -0.26
BRPF3-206ENST00000449261 CAVIN4Q5BKX8 364 aa13.46□□□□□ -0.26
BRPF3-206ENST00000449261 SKAP1Q86WV1 359 aa13.46□□□□□ -0.26
BRPF3-206ENST00000449261 BANK1Q8NDB2 785 aa13.46□□□□□ -0.26
BRPF3-206ENST00000449261 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.26
BRPF3-206ENST00000449261 CTTNBP2Q8WZ74 1663 aa13.46□□□□□ -0.26
BRPF3-206ENST00000449261 ATP5J2-PTCD1G3V325 749 aa13.46□□□□□ -0.26
BRPF3-206ENST00000449261 ME1P48163 572 aa13.46□□□□□ -0.26
BRPF3-206ENST00000449261 TESK2Q96S53 571 aa13.46□□□□□ -0.26
BRPF3-206ENST00000449261 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.26
BRPF3-206ENST00000449261 SNRPA1P09661 255 aaKnown RBP13.45□□□□□ -0.26
BRPF3-206ENST00000449261 ABCC2Q92887 1545 aa13.45□□□□□ -0.26
BRPF3-206ENST00000449261 CDKL5O76039 1030 aa13.45□□□□□ -0.26
BRPF3-206ENST00000449261 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
BRPF3-206ENST00000449261 TRIM5Q9C035 493 aa13.45□□□□□ -0.26
BRPF3-206ENST00000449261 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
BRPF3-206ENST00000449261 OFD1O75665 1012 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms